vitessce
Version:
Vitessce app and React component library
43 lines (40 loc) • 952 B
JavaScript
export const scAtacSeq10xPbmc = {
version: '1.0.0',
name: 'HiGlass serverless demo with 10x Genomics scATAC-seq 5k PBMC dataset',
datasets: [
{
uid: '10x-genomics-pbmc',
name: '10x Genomics PBMC',
files: [
{
type: 'genomic-profiles',
fileType: 'genomic-profiles.zarr',
url: 'http://higlass-serverless.s3.amazonaws.com/multivec/pbmc_10x_peaks_by_cluster.zarr',
},
],
},
],
layout: [
{
component: 'genomicProfiles',
props: {
profileTrackUidKey: 'file',
},
x: 0,
y: 0,
w: 8,
h: 2,
},
{
component: 'description',
props: {
description: '10x Genomics scATAC-seq of 5k PBMCs. Note: the Zarr HiGlass Plugin Datafetcher is not yet optimized. Please be patient while the HiGlass tracks load.',
},
x: 8,
y: 0,
w: 4,
h: 2,
},
],
initStrategy: 'auto',
};