uglymol
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Macromolecular Viewer for Crystallographers
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[](https://www.npmjs.com/package/uglymol)
UglyMol is a web-based macromolecular viewer focused on electron density.
It makes models and e.den. maps easy to recognize, navigate and interpret --
for crystallographers.
It looks like [Coot](http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/)
and walks (mouse controls) like Coot.
But it's only a viewer. For situations when you want
a quick look without downloading the data and starting Coot.
For instance, when screening
[Dimple](http://ccp4.github.io/dimple/) results in a synchrotron.
Of course, for this to work, it needs to be integrated into a website
that provides the data access
(see the [FAQ](https://github.com/uglymol/uglymol/wiki) on how to do it).
Try it:
- [1MRU](https://uglymol.github.io/1mru.html) (60kDa, 3Å),
and in [dual view](https://uglymol.github.io/dual.html) with PDB_REDO,
- [a blob](https://uglymol.github.io/dimple_thaum.html#xyz=14,18,12&eye=80,71,-41&zoom=70)
(Dimple result, thaumatin, 1.4Å),
- or any [local file or wwPDB entry](https://uglymol.github.io/view/).
It also has a [reciprocal space spin-off](https://uglymol.github.io/reciprocal.html?rlp=data/rlp.csv).
UglyMol is a small (~3 KLOC) [project](https://github.com/uglymol/uglymol)
forked from Nat Echols' [xtal.js](https://github.com/natechols/xtal.js/).
The plan is to keep it small. But if you're missing some functionality,
it won't hurt if you get in touch --
use [Issues](https://github.com/uglymol/uglymol/issues)
or [email](mailto:wojdyr@gmail.com).
See the [Wiki](https://github.com/uglymol/uglymol/wiki)
for more information.