slv-utils/cases/5.1/master/hetajs.json

Utilities for working with SLV and DAT files.

[
  {
    "id": "Default",
    "class": "Compartment"
  },
  {
    "id": "lac",
    "class": "Species",
    "compartment": "Default"
  },
  {
    "id": "alac",
    "class": "Species",
    "compartment": "Default"
  },
  {
    "id": "x1",
    "class": "Species",
    "compartment": "Default"
  },
  {
    "id": "x2",
    "class": "Species",
    "compartment": "Default"
  },
  {
    "id": "glc",
    "class": "Species",
    "compartment": "Default"
  },
  {
    "id": "gal",
    "class": "Species",
    "compartment": "Default"
  },
  {
    "id": "V1",
    "class": "Reaction",
    "actors": "lac => glc + gal"
  },
  {
    "id": "V2",
    "class": "Reaction",
    "actors": "alac => glc + gal"
  },
  {
    "id": "V4",
    "class": "Reaction",
    "actors": "lac + gal => x1"
  },
  {
    "id": "V5",
    "class": "Reaction",
    "actors": "alac + gal => x2"
  },
  {
    "id": "A",
    "class": "Record",
    "assignments": {
      "ode_": "1+lac/K_l+alac/K_a"
    }
  },
  {
    "id": "B",
    "class": "Record",
    "assignments": {
      "ode_": "1+glc/K_g"
    }
  },
  {
    "id": "C",
    "class": "Record",
    "assignments": {
      "ode_": "k3*gal+k1*lac/K_l+k2*alac/K_a+k44*x1+k44*x2"
    }
  },
  {
    "id": "D",
    "class": "Record",
    "assignments": {
      "ode_": "k33+k4*lac+k4*alac+(glc/K_g)*(k11+k22)"
    }
  },
  {
    "id": "E_",
    "class": "Record",
    "assignments": {
      "ode_": "E_0*D/(A*D+B*C)"
    }
  },
  {
    "id": "E_gal",
    "class": "Record",
    "assignments": {
      "ode_": "E_0*C/(A*D+B*C)"
    }
  },
  {
    "id": "V1",
    "assignments": {
      "ode_": "k1*E_*lac/K_l-k11*E_gal*glc/K_g"
    }
  },
  {
    "id": "V2",
    "assignments": {
      "ode_": "k2*E_*alac/K_a-k22*E_gal*glc/K_g"
    }
  },
  {
    "id": "V4",
    "assignments": {
      "ode_": "k4*E_gal*lac-k44*E_*x1"
    }
  },
  {
    "id": "V5",
    "assignments": {
      "ode_": "k4*E_gal*alac-k44*E_*x2"
    }
  },
  {
    "id": "oligo",
    "class": "Record",
    "assignments": {
      "ode_": "x1+x2"
    }
  },
  {
    "id": "v_glc",
    "class": "Record",
    "assignments": {
      "ode_": "V1+V2"
    }
  },
  {
    "id": "xxx",
    "class": "Record",
    "assignments": {
      "ode_": "glc-gal"
    }
  },
  {
    "id": "Default",
    "assignments": {
      "start_": "1"
    }
  },
  {
    "id": "E_0",
    "class": "Const",
    "num": 0.001117
  },
  {
    "id": "lac",
    "assignments": {
      "start_": "500"
    }
  },
  {
    "id": "alac",
    "assignments": {
      "start_": "0"
    }
  },
  {
    "id": "x1",
    "assignments": {
      "start_": "0"
    }
  },
  {
    "id": "x2",
    "assignments": {
      "start_": "0"
    }
  },
  {
    "id": "glc",
    "assignments": {
      "start_": "0"
    }
  },
  {
    "id": "gal",
    "assignments": {
      "start_": "0"
    }
  },
  {
    "id": "k1",
    "class": "Const",
    "num": 7068.49
  },
  {
    "id": "k2",
    "class": "Const",
    "num": 46000
  },
  {
    "id": "K_a",
    "class": "Const",
    "num": 0.8680725
  },
  {
    "id": "k4",
    "class": "Const",
    "num": 31.43778
  },
  {
    "id": "k33",
    "class": "Const",
    "num": 16432.29
  },
  {
    "id": "k44",
    "class": "Const",
    "num": 741.4315
  },
  {
    "id": "k11",
    "class": "Const",
    "num": 848.2373
  },
  {
    "id": "k3",
    "class": "Const",
    "num": 61.52228
  },
  {
    "id": "K_l",
    "class": "Const",
    "num": 0.5520582
  },
  {
    "id": "K_g",
    "class": "Const",
    "num": 16.99294
  },
  {
    "id": "k22",
    "class": "Const",
    "num": 11500
  }
]