seqparse
Version:
Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format
19 lines (18 loc) • 599 B
TypeScript
import { Annotation } from "..";
/**
* takes in a string representation of a GenBank file and outputs our
* part representation of it. an example of a Genbank file can be found
* at ./parsers/Gebank, though there is significant variability to the
* format
*
* another official example can be found at:
* https://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html
*/
declare const _default: (fileInput: string, fileName: string) => {
annotations: Annotation[];
name: string;
primers: never[];
seq: string;
type: "dna" | "rna" | "aa" | "unknown";
}[];
export default _default;