polymath-arch/README.md

Polymath Universata - Autonomous Software Architect & Curator Platform with multi-agent orchestration, advanced code analysis, intelligent development workflows, and AST-based pattern recognition

# Polymath Universata: Autonomous Software Architect & Curator Platform

🏗️ **Architect & Curator Agents with Multi-Agent Orchestration**

A comprehensive autonomous software development platform providing **Retrieval-Augmented Generation (RAG)** framework for agent coordination, advanced code analysis using TypeScript Compiler API, and intelligent orchestration of complex development workflows.

## Overview

Polymath Universata is an autonomous software **Architect & Curator** platform that orchestrates specialized agents for blockchain, Web3 dApps, and full-stack development. The platform features dedicated **Architect** agents for system design and **Curator** agents for knowledge management, working collaboratively with other specialized agents to deliver comprehensive development solutions.

Unlike traditional AI assistants that hallucinate based on outdated training data, Polymath Universata ensures all agent operations are grounded in verified, synchronized documentation through its advanced RAG framework.

### Key Capabilities

- **🏗️ Architect Agents** - System design, architecture planning, and technical leadership
- **📚 Curator Agents** - Knowledge management, documentation curation, and information synthesis
- **🤖 Multi-Agent Orchestration** - Intelligent coordination between Architect, Curator, and specialized agents
- **🔍 Advanced Code Analysis** - AST-based parsing, pattern recognition, security analysis using TypeScript Compiler API
- **🧠 RAG Framework** - Prevents hallucinations through verified data retrieval and validation
- **🔒 Security & Audit** - Enterprise-grade security with complete provenance tracking
- **⚡ Autonomous Operation** - Self-maintaining documentation and agent coordination

## Current Status

### ✅ Sprint 4 Complete: Autonomous Development Platform
- **Code Analysis Engine** - AST-based static analysis with pattern detection and security scanning
- **Orchestrator Agent** - Multi-agent coordination for complex development workflows
- **Multi-Modal Processing** - PDF, image, and document analysis capabilities
- **RAG Service** - Hallucination-free responses using verified documentation sources
- **MCP Integration** - Secure external data access via Model Context Protocol
- **Security Framework** - Consent management, audit logging, and provenance tracking
- **CLI Interface** - Command-line tools for project management and analysis

### 🚀 Sprint 5 Planning: Enhanced RAG & User Interface
- **Advanced Multi-Modal RAG** - Diagram interpretation and enhanced pattern recognition
- **Web Interface** - User dashboard for agent monitoring and interaction
- **Performance Optimization** - Advanced caching and distributed processing
- **Extended Language Support** - Additional programming language analysis

## Features

### 🤖 Agent Orchestration Framework
- **RAG-Powered Agents** - All agents operate with verified, current documentation
- **Multi-Agent Coordination** - Orchestrates documentation, analysis, and curation agents
- **Hallucination Prevention** - Grounded responses using synchronized documentation
- **Autonomous Operation** - Self-maintaining documentation and agent workflows

### 📚 Documentation Synchronization
- **Real-Time Sync** - Maintains current documentation across all agents
- **RAG Validation** - Validates all documentation changes against verified sources
- **Cross-Reference Management** - Automatic linking and validation
- **Provenance Tracking** - Complete audit trail for all documentation changes

### � RAG Framework
- **Verified Data Retrieval** - Prevents hallucinations through MCP and local docs
- **Confidence Scoring** - Rates accuracy and hallucination risk
- **Multi-Source Integration** - Combines MCP, documentation, and pattern data
- **Validation Pipelines** - Cross-references all outputs against current standards

### 🔒 Security & Compliance
- **Consent Management** - User control over all agent operations
- **Audit Logging** - Complete provenance tracking for all activities
- **Secure Credentials** - Encrypted storage for API keys and tokens
- **Enterprise Security** - Prevents malicious operations through validation

## Installation

```bash
# Install dependencies
bun install

# Build the orchestration framework
bun run build

# Start MCP server for documentation access
bun run mcp
```

## Usage

### Command Line Interface

```bash
# Initialize Polymath Universata in current directory
polymath init

# Check MCP server connection
polymath mcp

# Analyze current project
polymath analyze

# Start development session (placeholder)
polymath develop

# Manage agents (placeholder)
polymath agent

# Manage documentation (placeholder)
polymath docs

# Render documentation site
polymath render

# Manage consent (placeholder)
polymath consent

# Query audit logs
polymath audit

# Show help
polymath --help
```

### Programmatic API

```typescript
import { ArchAssistant, CodeAnalysisEngine, RAGService } from '@polymath-universata/core';

// Initialize the main assistant
const assistant = new ArchAssistant({
  projectRoot: './my-project',
  mcpServer: { enabled: true },
  verbose: true
});

await assistant.initialize();

// Create a specialized agent
const agent = await assistant.createAgent('blockchain-protocol', {
  name: 'ERC20Agent',
  framework: 'hardhat'
});

// Use code analysis engine
const analyzer = new CodeAnalysisEngine();
const analysis = await analyzer.analyzeCode(sourceCode, 'typescript');

// Query RAG service
const rag = new RAGService();
const response = await rag.query({
  query: 'ERC-20 implementation patterns',
  minConfidence: 0.8
});

await assistant.shutdown();
```

## Architecture

```
polymath-universata/
├── src/
│   ├── index.ts           # Main exports and ArchAssistant
│   ├── cli.ts             # Command-line interface
│   ├── agents/
│   │   ├── base.ts        # BaseAgent (exported, future implementation)
│   │   ├── blockchain-protocol.ts
│   │   ├── code-generation.ts
│   │   └── index.ts       # Agent exports
│   ├── bundler/
│   │   ├── adapter.ts     # Bundler adapter interface
│   │   ├── bun-adapter.ts # Bun bundler implementation
│   │   ├── index.ts       # Bundler exports
│   │   └── registry.ts    # Bundler registry
│   ├── cli/
│   │   ├── fetch-docs.ts  # Documentation fetching
│   │   ├── search-docs.ts # Documentation search
│   │   └── sync-docs.ts   # Documentation sync
│   ├── docs/
│   │   ├── analyzer.ts    # Documentation analyzer
│   │   ├── automation.ts  # Documentation automation
│   │   ├── fetcher.ts     # Documentation fetcher
│   │   ├── generator.ts   # Documentation generator
│   │   ├── index.ts       # Documentation exports
│   │   ├── pattern-analyzer.ts
│   │   ├── rag-validated-sync.ts
│   │   ├── renderer.ts    # Documentation renderer
│   │   ├── search-engine.ts
│   │   ├── sources.ts     # Documentation sources
│   │   └── sync-engine.ts # Documentation sync engine
│   ├── mcp/
│   │   ├── client.ts      # MCP client
│   │   └── logger.ts      # MCP logger
│   ├── rag/
│   │   ├── index.ts       # RAG exports
│   │   └── rag-service.ts # RAG service implementation
│   └── security/
│       ├── audit.ts       # Audit logging
│       ├── consent.ts     # Consent management
│       └── index.ts       # Security exports
├── docs/                  # Synchronized documentation
├── examples/              # Usage examples
├── test/                  # Test files
├── package.json
├── tsconfig.json
└── README.md
```

## Foundation: RAG-Powered Agent Orchestration

Arch is built on a robust **Retrieval-Augmented Generation (RAG)** framework that prevents hallucinations by ensuring all agent operations use verified, current documentation:

- ✅ **Verified Data Retrieval** - All operations grounded in synchronized documentation
- 🧪 **Hallucination Prevention** - RAG validation prevents incorrect outputs
- 🔒 **Security & Audit** - Complete provenance tracking for all operations
- � **Documentation Sync** - Real-time maintenance of current documentation
- 🤖 **Agent Coordination** - Orchestrates specialized agents with verified context

## MCP Integration

The Model Context Protocol integration provides:

- 🔌 **Documentation Sources** - Access to verified external documentation
- 🤖 **Agent Framework** - Standardized interface for agent operations
- 📊 **Validation Metrics** - Real-time accuracy and hallucination risk assessment
- 🔄 **Live Sync** - Real-time documentation updates across all agents
- 🌐 **Cross-Agent Coordination** - Orchestrated operations with verified context

## Development

```bash
# Run in development mode
bun run dev

# Build the project
bun run build

# Run CLI in development
bun run cli

# Type checking
bun run type-check

# Run tests
bun test

# Fetch documentation
bun run fetch-docs

# Sync documentation
bun run sync-docs

# Search documentation
bun run search-docs
```

## Scripts

- `dev` - Run in development mode with watch
- `build` - Build the project for distribution
- `start` - Run the built project
- `cli` - Run CLI in development mode
- `test` - Run test suite
- `lint` - Run ESLint
- `format` - Format code with Prettier
- `type-check` - TypeScript type checking
- `fetch-docs` - Fetch documentation from sources
- `sync-docs` - Synchronize documentation
- `search-docs` - Search documentation
- `analyze` - Run code analysis

## Configuration

Create a `.arch.config.json` in your project root:

```json
{
  "mcpServer": {
    "url": "http://localhost:3000",
    "enabled": true
  },
  "documentation": {
    "syncEnabled": true,
    "validationEnabled": true,
    "autoUpdate": true
  },
  "agents": {
    "defaultVerification": true,
    "auditLogging": true
  },
  "security": {
    "consentRequired": true,
    "encryptCredentials": true
  }
}
```

## Roadmap

- [x] Sprint 0: Self-bootstrap and MCP integration
- [x] Sprint 1: Documentation Intelligence System
- [x] Sprint 2: RAG Service & Hallucination Prevention
- [x] Sprint 3: Enhanced RAG & Multi-Agent Orchestration
- [x] Sprint 4: Advanced Multi-Modal Processing & Orchestration
- [ ] Sprint 5: Enhanced RAG & User Interface
- [ ] Sprint 6: Full Autonomous Agent Ecosystem

## Contributing

Contributions are welcome! Please feel free to submit a Pull Request.

## License

MIT License - see LICENSE file for details

## Related Projects

- [Echain QA MCP Server](https://marketplace.visualstudio.com/items?itemName=polymathuniversata.echain-qa-mcp-installer) - Required for RAG documentation access
- [Model Context Protocol](https://modelcontextprotocol.io) - Protocol for verified data retrieval

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**Built with ❤️ by Polymath Universata**  
*Autonomous. Accurate. Hallucination-Free.*