phylotree
Version:
A JavaScript library for developing applications and interactive visualizations involving [phylogenetic trees](https://en.wikipedia.org/wiki/Phylogenetic_tree), written as an extension of the [D3](http://d3js.org) [hierarchy layout](https://github.com/d3/
25 lines (19 loc) • 966 B
JavaScript
export { default as phylotree } from "./main.js";
export { default as pairwise_distances } from "./metrics/pairwise-distances";
export { default as sackin } from "./metrics/sackins";
export { centerOfTree } from "./metrics/center-of-tree";
export { computeMidpoint } from "./metrics/compute-midpoint";
export { default as rootToTip, fitRootToTip } from "./metrics/root-to-tip";
export { default as extract_dates } from "./extract-dates";
export { default as clusterPicker } from "./clustering/cluster-picker";
export { default as phylopart } from "./clustering/phylopart";
export { default as parseFasta } from "./msa-parsers/fasta";
export { default as neighborJoining, getDistanceMatrix } from "./neighbor-join";
export { loadAnnotations, parseAnnotations } from "./formats/nexus";
export { default as newickParser, getNewick } from "./formats/newick";
export {
default as inOrder,
leftChildRightSibling,
postOrder,
preOrder,
} from "./traversal.js";