phylotree
Version:
A JavaScript library for developing applications and interactive visualizations involving [phylogenetic trees](https://en.wikipedia.org/wiki/Phylogenetic_tree), written as an extension of the [D3](http://d3js.org) [hierarchy layout](https://github.com/d3/
1,653 lines (1,419 loc) • 351 kB
JavaScript
(function (global, factory) {
typeof exports === 'object' && typeof module !== 'undefined' ? factory(exports, require('underscore'), require('xml2js'), require('lodash')) :
typeof define === 'function' && define.amd ? define(['exports', 'underscore', 'xml2js', 'lodash'], factory) :
(global = typeof globalThis !== 'undefined' ? globalThis : global || self, factory(global.phylotree = global.phylotree || {}, global._, global.xml2js, global._$1));
})(this, (function (exports, _, xml2js, _$1) { 'use strict';
function _interopNamespace(e) {
if (e && e.__esModule) return e;
var n = Object.create(null);
if (e) {
Object.keys(e).forEach(function (k) {
if (k !== 'default') {
var d = Object.getOwnPropertyDescriptor(e, k);
Object.defineProperty(n, k, d.get ? d : {
enumerable: true,
get: function () { return e[k]; }
});
}
});
}
n["default"] = e;
return Object.freeze(n);
}
var ___namespace = /*#__PURE__*/_interopNamespace(_);
var ___namespace$1 = /*#__PURE__*/_interopNamespace(_$1);
function ascending$1(a, b) {
return a == null || b == null ? NaN : a < b ? -1 : a > b ? 1 : a >= b ? 0 : NaN;
}
function descending(a, b) {
return a == null || b == null ? NaN
: b < a ? -1
: b > a ? 1
: b >= a ? 0
: NaN;
}
function bisector(f) {
let compare1, compare2, delta;
// If an accessor is specified, promote it to a comparator. In this case we
// can test whether the search value is (self-) comparable. We can’t do this
// for a comparator (except for specific, known comparators) because we can’t
// tell if the comparator is symmetric, and an asymmetric comparator can’t be
// used to test whether a single value is comparable.
if (f.length !== 2) {
compare1 = ascending$1;
compare2 = (d, x) => ascending$1(f(d), x);
delta = (d, x) => f(d) - x;
} else {
compare1 = f === ascending$1 || f === descending ? f : zero$1;
compare2 = f;
delta = f;
}
function left(a, x, lo = 0, hi = a.length) {
if (lo < hi) {
if (compare1(x, x) !== 0) return hi;
do {
const mid = (lo + hi) >>> 1;
if (compare2(a[mid], x) < 0) lo = mid + 1;
else hi = mid;
} while (lo < hi);
}
return lo;
}
function right(a, x, lo = 0, hi = a.length) {
if (lo < hi) {
if (compare1(x, x) !== 0) return hi;
do {
const mid = (lo + hi) >>> 1;
if (compare2(a[mid], x) <= 0) lo = mid + 1;
else hi = mid;
} while (lo < hi);
}
return lo;
}
function center(a, x, lo = 0, hi = a.length) {
const i = left(a, x, lo, hi - 1);
return i > lo && delta(a[i - 1], x) > -delta(a[i], x) ? i - 1 : i;
}
return {left, center, right};
}
function zero$1() {
return 0;
}
function number$2(x) {
return x === null ? NaN : +x;
}
const ascendingBisect = bisector(ascending$1);
const bisectRight = ascendingBisect.right;
bisector(number$2).center;
var bisect = bisectRight;
const e10 = Math.sqrt(50),
e5 = Math.sqrt(10),
e2 = Math.sqrt(2);
function tickSpec(start, stop, count) {
const step = (stop - start) / Math.max(0, count),
power = Math.floor(Math.log10(step)),
error = step / Math.pow(10, power),
factor = error >= e10 ? 10 : error >= e5 ? 5 : error >= e2 ? 2 : 1;
let i1, i2, inc;
if (power < 0) {
inc = Math.pow(10, -power) / factor;
i1 = Math.round(start * inc);
i2 = Math.round(stop * inc);
if (i1 / inc < start) ++i1;
if (i2 / inc > stop) --i2;
inc = -inc;
} else {
inc = Math.pow(10, power) * factor;
i1 = Math.round(start / inc);
i2 = Math.round(stop / inc);
if (i1 * inc < start) ++i1;
if (i2 * inc > stop) --i2;
}
if (i2 < i1 && 0.5 <= count && count < 2) return tickSpec(start, stop, count * 2);
return [i1, i2, inc];
}
function ticks(start, stop, count) {
stop = +stop, start = +start, count = +count;
if (!(count > 0)) return [];
if (start === stop) return [start];
const reverse = stop < start, [i1, i2, inc] = reverse ? tickSpec(stop, start, count) : tickSpec(start, stop, count);
if (!(i2 >= i1)) return [];
const n = i2 - i1 + 1, ticks = new Array(n);
if (reverse) {
if (inc < 0) for (let i = 0; i < n; ++i) ticks[i] = (i2 - i) / -inc;
else for (let i = 0; i < n; ++i) ticks[i] = (i2 - i) * inc;
} else {
if (inc < 0) for (let i = 0; i < n; ++i) ticks[i] = (i1 + i) / -inc;
else for (let i = 0; i < n; ++i) ticks[i] = (i1 + i) * inc;
}
return ticks;
}
function tickIncrement(start, stop, count) {
stop = +stop, start = +start, count = +count;
return tickSpec(start, stop, count)[2];
}
function tickStep(start, stop, count) {
stop = +stop, start = +start, count = +count;
const reverse = stop < start, inc = reverse ? tickIncrement(stop, start, count) : tickIncrement(start, stop, count);
return (reverse ? -1 : 1) * (inc < 0 ? 1 / -inc : inc);
}
function max$1(values, valueof) {
let max;
if (valueof === undefined) {
for (const value of values) {
if (value != null
&& (max < value || (max === undefined && value >= value))) {
max = value;
}
}
} else {
let index = -1;
for (let value of values) {
if ((value = valueof(value, ++index, values)) != null
&& (max < value || (max === undefined && value >= value))) {
max = value;
}
}
}
return max;
}
function identity$4(x) {
return x;
}
var top = 1,
right = 2,
bottom = 3,
left = 4,
epsilon$1 = 1e-6;
function translateX(x) {
return "translate(" + x + ",0)";
}
function translateY(y) {
return "translate(0," + y + ")";
}
function number$1(scale) {
return d => +scale(d);
}
function center(scale, offset) {
offset = Math.max(0, scale.bandwidth() - offset * 2) / 2;
if (scale.round()) offset = Math.round(offset);
return d => +scale(d) + offset;
}
function entering() {
return !this.__axis;
}
function axis(orient, scale) {
var tickArguments = [],
tickValues = null,
tickFormat = null,
tickSizeInner = 6,
tickSizeOuter = 6,
tickPadding = 3,
offset = typeof window !== "undefined" && window.devicePixelRatio > 1 ? 0 : 0.5,
k = orient === top || orient === left ? -1 : 1,
x = orient === left || orient === right ? "x" : "y",
transform = orient === top || orient === bottom ? translateX : translateY;
function axis(context) {
var values = tickValues == null ? (scale.ticks ? scale.ticks.apply(scale, tickArguments) : scale.domain()) : tickValues,
format = tickFormat == null ? (scale.tickFormat ? scale.tickFormat.apply(scale, tickArguments) : identity$4) : tickFormat,
spacing = Math.max(tickSizeInner, 0) + tickPadding,
range = scale.range(),
range0 = +range[0] + offset,
range1 = +range[range.length - 1] + offset,
position = (scale.bandwidth ? center : number$1)(scale.copy(), offset),
selection = context.selection ? context.selection() : context,
path = selection.selectAll(".domain").data([null]),
tick = selection.selectAll(".tick").data(values, scale).order(),
tickExit = tick.exit(),
tickEnter = tick.enter().append("g").attr("class", "tick"),
line = tick.select("line"),
text = tick.select("text");
path = path.merge(path.enter().insert("path", ".tick")
.attr("class", "domain")
.attr("stroke", "currentColor"));
tick = tick.merge(tickEnter);
line = line.merge(tickEnter.append("line")
.attr("stroke", "currentColor")
.attr(x + "2", k * tickSizeInner));
text = text.merge(tickEnter.append("text")
.attr("fill", "currentColor")
.attr(x, k * spacing)
.attr("dy", orient === top ? "0em" : orient === bottom ? "0.71em" : "0.32em"));
if (context !== selection) {
path = path.transition(context);
tick = tick.transition(context);
line = line.transition(context);
text = text.transition(context);
tickExit = tickExit.transition(context)
.attr("opacity", epsilon$1)
.attr("transform", function(d) { return isFinite(d = position(d)) ? transform(d + offset) : this.getAttribute("transform"); });
tickEnter
.attr("opacity", epsilon$1)
.attr("transform", function(d) { var p = this.parentNode.__axis; return transform((p && isFinite(p = p(d)) ? p : position(d)) + offset); });
}
tickExit.remove();
path
.attr("d", orient === left || orient === right
? (tickSizeOuter ? "M" + k * tickSizeOuter + "," + range0 + "H" + offset + "V" + range1 + "H" + k * tickSizeOuter : "M" + offset + "," + range0 + "V" + range1)
: (tickSizeOuter ? "M" + range0 + "," + k * tickSizeOuter + "V" + offset + "H" + range1 + "V" + k * tickSizeOuter : "M" + range0 + "," + offset + "H" + range1));
tick
.attr("opacity", 1)
.attr("transform", function(d) { return transform(position(d) + offset); });
line
.attr(x + "2", k * tickSizeInner);
text
.attr(x, k * spacing)
.text(format);
selection.filter(entering)
.attr("fill", "none")
.attr("font-size", 10)
.attr("font-family", "sans-serif")
.attr("text-anchor", orient === right ? "start" : orient === left ? "end" : "middle");
selection
.each(function() { this.__axis = position; });
}
axis.scale = function(_) {
return arguments.length ? (scale = _, axis) : scale;
};
axis.ticks = function() {
return tickArguments = Array.from(arguments), axis;
};
axis.tickArguments = function(_) {
return arguments.length ? (tickArguments = _ == null ? [] : Array.from(_), axis) : tickArguments.slice();
};
axis.tickValues = function(_) {
return arguments.length ? (tickValues = _ == null ? null : Array.from(_), axis) : tickValues && tickValues.slice();
};
axis.tickFormat = function(_) {
return arguments.length ? (tickFormat = _, axis) : tickFormat;
};
axis.tickSize = function(_) {
return arguments.length ? (tickSizeInner = tickSizeOuter = +_, axis) : tickSizeInner;
};
axis.tickSizeInner = function(_) {
return arguments.length ? (tickSizeInner = +_, axis) : tickSizeInner;
};
axis.tickSizeOuter = function(_) {
return arguments.length ? (tickSizeOuter = +_, axis) : tickSizeOuter;
};
axis.tickPadding = function(_) {
return arguments.length ? (tickPadding = +_, axis) : tickPadding;
};
axis.offset = function(_) {
return arguments.length ? (offset = +_, axis) : offset;
};
return axis;
}
function axisTop(scale) {
return axis(top, scale);
}
var noop = {value: () => {}};
function dispatch() {
for (var i = 0, n = arguments.length, _ = {}, t; i < n; ++i) {
if (!(t = arguments[i] + "") || (t in _) || /[\s.]/.test(t)) throw new Error("illegal type: " + t);
_[t] = [];
}
return new Dispatch(_);
}
function Dispatch(_) {
this._ = _;
}
function parseTypenames$1(typenames, types) {
return typenames.trim().split(/^|\s+/).map(function(t) {
var name = "", i = t.indexOf(".");
if (i >= 0) name = t.slice(i + 1), t = t.slice(0, i);
if (t && !types.hasOwnProperty(t)) throw new Error("unknown type: " + t);
return {type: t, name: name};
});
}
Dispatch.prototype = dispatch.prototype = {
constructor: Dispatch,
on: function(typename, callback) {
var _ = this._,
T = parseTypenames$1(typename + "", _),
t,
i = -1,
n = T.length;
// If no callback was specified, return the callback of the given type and name.
if (arguments.length < 2) {
while (++i < n) if ((t = (typename = T[i]).type) && (t = get$1(_[t], typename.name))) return t;
return;
}
// If a type was specified, set the callback for the given type and name.
// Otherwise, if a null callback was specified, remove callbacks of the given name.
if (callback != null && typeof callback !== "function") throw new Error("invalid callback: " + callback);
while (++i < n) {
if (t = (typename = T[i]).type) _[t] = set$1(_[t], typename.name, callback);
else if (callback == null) for (t in _) _[t] = set$1(_[t], typename.name, null);
}
return this;
},
copy: function() {
var copy = {}, _ = this._;
for (var t in _) copy[t] = _[t].slice();
return new Dispatch(copy);
},
call: function(type, that) {
if ((n = arguments.length - 2) > 0) for (var args = new Array(n), i = 0, n, t; i < n; ++i) args[i] = arguments[i + 2];
if (!this._.hasOwnProperty(type)) throw new Error("unknown type: " + type);
for (t = this._[type], i = 0, n = t.length; i < n; ++i) t[i].value.apply(that, args);
},
apply: function(type, that, args) {
if (!this._.hasOwnProperty(type)) throw new Error("unknown type: " + type);
for (var t = this._[type], i = 0, n = t.length; i < n; ++i) t[i].value.apply(that, args);
}
};
function get$1(type, name) {
for (var i = 0, n = type.length, c; i < n; ++i) {
if ((c = type[i]).name === name) {
return c.value;
}
}
}
function set$1(type, name, callback) {
for (var i = 0, n = type.length; i < n; ++i) {
if (type[i].name === name) {
type[i] = noop, type = type.slice(0, i).concat(type.slice(i + 1));
break;
}
}
if (callback != null) type.push({name: name, value: callback});
return type;
}
var xhtml = "http://www.w3.org/1999/xhtml";
var namespaces = {
svg: "http://www.w3.org/2000/svg",
xhtml: xhtml,
xlink: "http://www.w3.org/1999/xlink",
xml: "http://www.w3.org/XML/1998/namespace",
xmlns: "http://www.w3.org/2000/xmlns/"
};
function namespace(name) {
var prefix = name += "", i = prefix.indexOf(":");
if (i >= 0 && (prefix = name.slice(0, i)) !== "xmlns") name = name.slice(i + 1);
return namespaces.hasOwnProperty(prefix) ? {space: namespaces[prefix], local: name} : name; // eslint-disable-line no-prototype-builtins
}
function creatorInherit(name) {
return function() {
var document = this.ownerDocument,
uri = this.namespaceURI;
return uri === xhtml && document.documentElement.namespaceURI === xhtml
? document.createElement(name)
: document.createElementNS(uri, name);
};
}
function creatorFixed(fullname) {
return function() {
return this.ownerDocument.createElementNS(fullname.space, fullname.local);
};
}
function creator(name) {
var fullname = namespace(name);
return (fullname.local
? creatorFixed
: creatorInherit)(fullname);
}
function none() {}
function selector(selector) {
return selector == null ? none : function() {
return this.querySelector(selector);
};
}
function selection_select(select) {
if (typeof select !== "function") select = selector(select);
for (var groups = this._groups, m = groups.length, subgroups = new Array(m), j = 0; j < m; ++j) {
for (var group = groups[j], n = group.length, subgroup = subgroups[j] = new Array(n), node, subnode, i = 0; i < n; ++i) {
if ((node = group[i]) && (subnode = select.call(node, node.__data__, i, group))) {
if ("__data__" in node) subnode.__data__ = node.__data__;
subgroup[i] = subnode;
}
}
}
return new Selection$1(subgroups, this._parents);
}
// Given something array like (or null), returns something that is strictly an
// array. This is used to ensure that array-like objects passed to d3.selectAll
// or selection.selectAll are converted into proper arrays when creating a
// selection; we don’t ever want to create a selection backed by a live
// HTMLCollection or NodeList. However, note that selection.selectAll will use a
// static NodeList as a group, since it safely derived from querySelectorAll.
function array$1(x) {
return x == null ? [] : Array.isArray(x) ? x : Array.from(x);
}
function empty$1() {
return [];
}
function selectorAll(selector) {
return selector == null ? empty$1 : function() {
return this.querySelectorAll(selector);
};
}
function arrayAll(select) {
return function() {
return array$1(select.apply(this, arguments));
};
}
function selection_selectAll(select) {
if (typeof select === "function") select = arrayAll(select);
else select = selectorAll(select);
for (var groups = this._groups, m = groups.length, subgroups = [], parents = [], j = 0; j < m; ++j) {
for (var group = groups[j], n = group.length, node, i = 0; i < n; ++i) {
if (node = group[i]) {
subgroups.push(select.call(node, node.__data__, i, group));
parents.push(node);
}
}
}
return new Selection$1(subgroups, parents);
}
function matcher(selector) {
return function() {
return this.matches(selector);
};
}
function childMatcher(selector) {
return function(node) {
return node.matches(selector);
};
}
var find = Array.prototype.find;
function childFind(match) {
return function() {
return find.call(this.children, match);
};
}
function childFirst() {
return this.firstElementChild;
}
function selection_selectChild(match) {
return this.select(match == null ? childFirst
: childFind(typeof match === "function" ? match : childMatcher(match)));
}
var filter = Array.prototype.filter;
function children() {
return Array.from(this.children);
}
function childrenFilter(match) {
return function() {
return filter.call(this.children, match);
};
}
function selection_selectChildren(match) {
return this.selectAll(match == null ? children
: childrenFilter(typeof match === "function" ? match : childMatcher(match)));
}
function selection_filter(match) {
if (typeof match !== "function") match = matcher(match);
for (var groups = this._groups, m = groups.length, subgroups = new Array(m), j = 0; j < m; ++j) {
for (var group = groups[j], n = group.length, subgroup = subgroups[j] = [], node, i = 0; i < n; ++i) {
if ((node = group[i]) && match.call(node, node.__data__, i, group)) {
subgroup.push(node);
}
}
}
return new Selection$1(subgroups, this._parents);
}
function sparse(update) {
return new Array(update.length);
}
function selection_enter() {
return new Selection$1(this._enter || this._groups.map(sparse), this._parents);
}
function EnterNode(parent, datum) {
this.ownerDocument = parent.ownerDocument;
this.namespaceURI = parent.namespaceURI;
this._next = null;
this._parent = parent;
this.__data__ = datum;
}
EnterNode.prototype = {
constructor: EnterNode,
appendChild: function(child) { return this._parent.insertBefore(child, this._next); },
insertBefore: function(child, next) { return this._parent.insertBefore(child, next); },
querySelector: function(selector) { return this._parent.querySelector(selector); },
querySelectorAll: function(selector) { return this._parent.querySelectorAll(selector); }
};
function constant$5(x) {
return function() {
return x;
};
}
function bindIndex(parent, group, enter, update, exit, data) {
var i = 0,
node,
groupLength = group.length,
dataLength = data.length;
// Put any non-null nodes that fit into update.
// Put any null nodes into enter.
// Put any remaining data into enter.
for (; i < dataLength; ++i) {
if (node = group[i]) {
node.__data__ = data[i];
update[i] = node;
} else {
enter[i] = new EnterNode(parent, data[i]);
}
}
// Put any non-null nodes that don’t fit into exit.
for (; i < groupLength; ++i) {
if (node = group[i]) {
exit[i] = node;
}
}
}
function bindKey(parent, group, enter, update, exit, data, key) {
var i,
node,
nodeByKeyValue = new Map,
groupLength = group.length,
dataLength = data.length,
keyValues = new Array(groupLength),
keyValue;
// Compute the key for each node.
// If multiple nodes have the same key, the duplicates are added to exit.
for (i = 0; i < groupLength; ++i) {
if (node = group[i]) {
keyValues[i] = keyValue = key.call(node, node.__data__, i, group) + "";
if (nodeByKeyValue.has(keyValue)) {
exit[i] = node;
} else {
nodeByKeyValue.set(keyValue, node);
}
}
}
// Compute the key for each datum.
// If there a node associated with this key, join and add it to update.
// If there is not (or the key is a duplicate), add it to enter.
for (i = 0; i < dataLength; ++i) {
keyValue = key.call(parent, data[i], i, data) + "";
if (node = nodeByKeyValue.get(keyValue)) {
update[i] = node;
node.__data__ = data[i];
nodeByKeyValue.delete(keyValue);
} else {
enter[i] = new EnterNode(parent, data[i]);
}
}
// Add any remaining nodes that were not bound to data to exit.
for (i = 0; i < groupLength; ++i) {
if ((node = group[i]) && (nodeByKeyValue.get(keyValues[i]) === node)) {
exit[i] = node;
}
}
}
function datum(node) {
return node.__data__;
}
function selection_data(value, key) {
if (!arguments.length) return Array.from(this, datum);
var bind = key ? bindKey : bindIndex,
parents = this._parents,
groups = this._groups;
if (typeof value !== "function") value = constant$5(value);
for (var m = groups.length, update = new Array(m), enter = new Array(m), exit = new Array(m), j = 0; j < m; ++j) {
var parent = parents[j],
group = groups[j],
groupLength = group.length,
data = arraylike(value.call(parent, parent && parent.__data__, j, parents)),
dataLength = data.length,
enterGroup = enter[j] = new Array(dataLength),
updateGroup = update[j] = new Array(dataLength),
exitGroup = exit[j] = new Array(groupLength);
bind(parent, group, enterGroup, updateGroup, exitGroup, data, key);
// Now connect the enter nodes to their following update node, such that
// appendChild can insert the materialized enter node before this node,
// rather than at the end of the parent node.
for (var i0 = 0, i1 = 0, previous, next; i0 < dataLength; ++i0) {
if (previous = enterGroup[i0]) {
if (i0 >= i1) i1 = i0 + 1;
while (!(next = updateGroup[i1]) && ++i1 < dataLength);
previous._next = next || null;
}
}
}
update = new Selection$1(update, parents);
update._enter = enter;
update._exit = exit;
return update;
}
// Given some data, this returns an array-like view of it: an object that
// exposes a length property and allows numeric indexing. Note that unlike
// selectAll, this isn’t worried about “live” collections because the resulting
// array will only be used briefly while data is being bound. (It is possible to
// cause the data to change while iterating by using a key function, but please
// don’t; we’d rather avoid a gratuitous copy.)
function arraylike(data) {
return typeof data === "object" && "length" in data
? data // Array, TypedArray, NodeList, array-like
: Array.from(data); // Map, Set, iterable, string, or anything else
}
function selection_exit() {
return new Selection$1(this._exit || this._groups.map(sparse), this._parents);
}
function selection_join(onenter, onupdate, onexit) {
var enter = this.enter(), update = this, exit = this.exit();
if (typeof onenter === "function") {
enter = onenter(enter);
if (enter) enter = enter.selection();
} else {
enter = enter.append(onenter + "");
}
if (onupdate != null) {
update = onupdate(update);
if (update) update = update.selection();
}
if (onexit == null) exit.remove(); else onexit(exit);
return enter && update ? enter.merge(update).order() : update;
}
function selection_merge(context) {
var selection = context.selection ? context.selection() : context;
for (var groups0 = this._groups, groups1 = selection._groups, m0 = groups0.length, m1 = groups1.length, m = Math.min(m0, m1), merges = new Array(m0), j = 0; j < m; ++j) {
for (var group0 = groups0[j], group1 = groups1[j], n = group0.length, merge = merges[j] = new Array(n), node, i = 0; i < n; ++i) {
if (node = group0[i] || group1[i]) {
merge[i] = node;
}
}
}
for (; j < m0; ++j) {
merges[j] = groups0[j];
}
return new Selection$1(merges, this._parents);
}
function selection_order() {
for (var groups = this._groups, j = -1, m = groups.length; ++j < m;) {
for (var group = groups[j], i = group.length - 1, next = group[i], node; --i >= 0;) {
if (node = group[i]) {
if (next && node.compareDocumentPosition(next) ^ 4) next.parentNode.insertBefore(node, next);
next = node;
}
}
}
return this;
}
function selection_sort(compare) {
if (!compare) compare = ascending;
function compareNode(a, b) {
return a && b ? compare(a.__data__, b.__data__) : !a - !b;
}
for (var groups = this._groups, m = groups.length, sortgroups = new Array(m), j = 0; j < m; ++j) {
for (var group = groups[j], n = group.length, sortgroup = sortgroups[j] = new Array(n), node, i = 0; i < n; ++i) {
if (node = group[i]) {
sortgroup[i] = node;
}
}
sortgroup.sort(compareNode);
}
return new Selection$1(sortgroups, this._parents).order();
}
function ascending(a, b) {
return a < b ? -1 : a > b ? 1 : a >= b ? 0 : NaN;
}
function selection_call() {
var callback = arguments[0];
arguments[0] = this;
callback.apply(null, arguments);
return this;
}
function selection_nodes() {
return Array.from(this);
}
function selection_node() {
for (var groups = this._groups, j = 0, m = groups.length; j < m; ++j) {
for (var group = groups[j], i = 0, n = group.length; i < n; ++i) {
var node = group[i];
if (node) return node;
}
}
return null;
}
function selection_size() {
let size = 0;
for (const node of this) ++size; // eslint-disable-line no-unused-vars
return size;
}
function selection_empty() {
return !this.node();
}
function selection_each(callback) {
for (var groups = this._groups, j = 0, m = groups.length; j < m; ++j) {
for (var group = groups[j], i = 0, n = group.length, node; i < n; ++i) {
if (node = group[i]) callback.call(node, node.__data__, i, group);
}
}
return this;
}
function attrRemove$1(name) {
return function() {
this.removeAttribute(name);
};
}
function attrRemoveNS$1(fullname) {
return function() {
this.removeAttributeNS(fullname.space, fullname.local);
};
}
function attrConstant$1(name, value) {
return function() {
this.setAttribute(name, value);
};
}
function attrConstantNS$1(fullname, value) {
return function() {
this.setAttributeNS(fullname.space, fullname.local, value);
};
}
function attrFunction$1(name, value) {
return function() {
var v = value.apply(this, arguments);
if (v == null) this.removeAttribute(name);
else this.setAttribute(name, v);
};
}
function attrFunctionNS$1(fullname, value) {
return function() {
var v = value.apply(this, arguments);
if (v == null) this.removeAttributeNS(fullname.space, fullname.local);
else this.setAttributeNS(fullname.space, fullname.local, v);
};
}
function selection_attr(name, value) {
var fullname = namespace(name);
if (arguments.length < 2) {
var node = this.node();
return fullname.local
? node.getAttributeNS(fullname.space, fullname.local)
: node.getAttribute(fullname);
}
return this.each((value == null
? (fullname.local ? attrRemoveNS$1 : attrRemove$1) : (typeof value === "function"
? (fullname.local ? attrFunctionNS$1 : attrFunction$1)
: (fullname.local ? attrConstantNS$1 : attrConstant$1)))(fullname, value));
}
function defaultView(node) {
return (node.ownerDocument && node.ownerDocument.defaultView) // node is a Node
|| (node.document && node) // node is a Window
|| node.defaultView; // node is a Document
}
function styleRemove$1(name) {
return function() {
this.style.removeProperty(name);
};
}
function styleConstant$1(name, value, priority) {
return function() {
this.style.setProperty(name, value, priority);
};
}
function styleFunction$1(name, value, priority) {
return function() {
var v = value.apply(this, arguments);
if (v == null) this.style.removeProperty(name);
else this.style.setProperty(name, v, priority);
};
}
function selection_style(name, value, priority) {
return arguments.length > 1
? this.each((value == null
? styleRemove$1 : typeof value === "function"
? styleFunction$1
: styleConstant$1)(name, value, priority == null ? "" : priority))
: styleValue(this.node(), name);
}
function styleValue(node, name) {
return node.style.getPropertyValue(name)
|| defaultView(node).getComputedStyle(node, null).getPropertyValue(name);
}
function propertyRemove(name) {
return function() {
delete this[name];
};
}
function propertyConstant(name, value) {
return function() {
this[name] = value;
};
}
function propertyFunction(name, value) {
return function() {
var v = value.apply(this, arguments);
if (v == null) delete this[name];
else this[name] = v;
};
}
function selection_property(name, value) {
return arguments.length > 1
? this.each((value == null
? propertyRemove : typeof value === "function"
? propertyFunction
: propertyConstant)(name, value))
: this.node()[name];
}
function classArray(string) {
return string.trim().split(/^|\s+/);
}
function classList(node) {
return node.classList || new ClassList(node);
}
function ClassList(node) {
this._node = node;
this._names = classArray(node.getAttribute("class") || "");
}
ClassList.prototype = {
add: function(name) {
var i = this._names.indexOf(name);
if (i < 0) {
this._names.push(name);
this._node.setAttribute("class", this._names.join(" "));
}
},
remove: function(name) {
var i = this._names.indexOf(name);
if (i >= 0) {
this._names.splice(i, 1);
this._node.setAttribute("class", this._names.join(" "));
}
},
contains: function(name) {
return this._names.indexOf(name) >= 0;
}
};
function classedAdd(node, names) {
var list = classList(node), i = -1, n = names.length;
while (++i < n) list.add(names[i]);
}
function classedRemove(node, names) {
var list = classList(node), i = -1, n = names.length;
while (++i < n) list.remove(names[i]);
}
function classedTrue(names) {
return function() {
classedAdd(this, names);
};
}
function classedFalse(names) {
return function() {
classedRemove(this, names);
};
}
function classedFunction(names, value) {
return function() {
(value.apply(this, arguments) ? classedAdd : classedRemove)(this, names);
};
}
function selection_classed(name, value) {
var names = classArray(name + "");
if (arguments.length < 2) {
var list = classList(this.node()), i = -1, n = names.length;
while (++i < n) if (!list.contains(names[i])) return false;
return true;
}
return this.each((typeof value === "function"
? classedFunction : value
? classedTrue
: classedFalse)(names, value));
}
function textRemove() {
this.textContent = "";
}
function textConstant$1(value) {
return function() {
this.textContent = value;
};
}
function textFunction$1(value) {
return function() {
var v = value.apply(this, arguments);
this.textContent = v == null ? "" : v;
};
}
function selection_text(value) {
return arguments.length
? this.each(value == null
? textRemove : (typeof value === "function"
? textFunction$1
: textConstant$1)(value))
: this.node().textContent;
}
function htmlRemove() {
this.innerHTML = "";
}
function htmlConstant(value) {
return function() {
this.innerHTML = value;
};
}
function htmlFunction(value) {
return function() {
var v = value.apply(this, arguments);
this.innerHTML = v == null ? "" : v;
};
}
function selection_html(value) {
return arguments.length
? this.each(value == null
? htmlRemove : (typeof value === "function"
? htmlFunction
: htmlConstant)(value))
: this.node().innerHTML;
}
function raise() {
if (this.nextSibling) this.parentNode.appendChild(this);
}
function selection_raise() {
return this.each(raise);
}
function lower() {
if (this.previousSibling) this.parentNode.insertBefore(this, this.parentNode.firstChild);
}
function selection_lower() {
return this.each(lower);
}
function selection_append(name) {
var create = typeof name === "function" ? name : creator(name);
return this.select(function() {
return this.appendChild(create.apply(this, arguments));
});
}
function constantNull() {
return null;
}
function selection_insert(name, before) {
var create = typeof name === "function" ? name : creator(name),
select = before == null ? constantNull : typeof before === "function" ? before : selector(before);
return this.select(function() {
return this.insertBefore(create.apply(this, arguments), select.apply(this, arguments) || null);
});
}
function remove$1() {
var parent = this.parentNode;
if (parent) parent.removeChild(this);
}
function selection_remove() {
return this.each(remove$1);
}
function selection_cloneShallow() {
var clone = this.cloneNode(false), parent = this.parentNode;
return parent ? parent.insertBefore(clone, this.nextSibling) : clone;
}
function selection_cloneDeep() {
var clone = this.cloneNode(true), parent = this.parentNode;
return parent ? parent.insertBefore(clone, this.nextSibling) : clone;
}
function selection_clone(deep) {
return this.select(deep ? selection_cloneDeep : selection_cloneShallow);
}
function selection_datum(value) {
return arguments.length
? this.property("__data__", value)
: this.node().__data__;
}
function contextListener(listener) {
return function(event) {
listener.call(this, event, this.__data__);
};
}
function parseTypenames(typenames) {
return typenames.trim().split(/^|\s+/).map(function(t) {
var name = "", i = t.indexOf(".");
if (i >= 0) name = t.slice(i + 1), t = t.slice(0, i);
return {type: t, name: name};
});
}
function onRemove(typename) {
return function() {
var on = this.__on;
if (!on) return;
for (var j = 0, i = -1, m = on.length, o; j < m; ++j) {
if (o = on[j], (!typename.type || o.type === typename.type) && o.name === typename.name) {
this.removeEventListener(o.type, o.listener, o.options);
} else {
on[++i] = o;
}
}
if (++i) on.length = i;
else delete this.__on;
};
}
function onAdd(typename, value, options) {
return function() {
var on = this.__on, o, listener = contextListener(value);
if (on) for (var j = 0, m = on.length; j < m; ++j) {
if ((o = on[j]).type === typename.type && o.name === typename.name) {
this.removeEventListener(o.type, o.listener, o.options);
this.addEventListener(o.type, o.listener = listener, o.options = options);
o.value = value;
return;
}
}
this.addEventListener(typename.type, listener, options);
o = {type: typename.type, name: typename.name, value: value, listener: listener, options: options};
if (!on) this.__on = [o];
else on.push(o);
};
}
function selection_on(typename, value, options) {
var typenames = parseTypenames(typename + ""), i, n = typenames.length, t;
if (arguments.length < 2) {
var on = this.node().__on;
if (on) for (var j = 0, m = on.length, o; j < m; ++j) {
for (i = 0, o = on[j]; i < n; ++i) {
if ((t = typenames[i]).type === o.type && t.name === o.name) {
return o.value;
}
}
}
return;
}
on = value ? onAdd : onRemove;
for (i = 0; i < n; ++i) this.each(on(typenames[i], value, options));
return this;
}
function dispatchEvent(node, type, params) {
var window = defaultView(node),
event = window.CustomEvent;
if (typeof event === "function") {
event = new event(type, params);
} else {
event = window.document.createEvent("Event");
if (params) event.initEvent(type, params.bubbles, params.cancelable), event.detail = params.detail;
else event.initEvent(type, false, false);
}
node.dispatchEvent(event);
}
function dispatchConstant(type, params) {
return function() {
return dispatchEvent(this, type, params);
};
}
function dispatchFunction(type, params) {
return function() {
return dispatchEvent(this, type, params.apply(this, arguments));
};
}
function selection_dispatch(type, params) {
return this.each((typeof params === "function"
? dispatchFunction
: dispatchConstant)(type, params));
}
function* selection_iterator() {
for (var groups = this._groups, j = 0, m = groups.length; j < m; ++j) {
for (var group = groups[j], i = 0, n = group.length, node; i < n; ++i) {
if (node = group[i]) yield node;
}
}
}
var root = [null];
function Selection$1(groups, parents) {
this._groups = groups;
this._parents = parents;
}
function selection() {
return new Selection$1([[document.documentElement]], root);
}
function selection_selection() {
return this;
}
Selection$1.prototype = selection.prototype = {
constructor: Selection$1,
select: selection_select,
selectAll: selection_selectAll,
selectChild: selection_selectChild,
selectChildren: selection_selectChildren,
filter: selection_filter,
data: selection_data,
enter: selection_enter,
exit: selection_exit,
join: selection_join,
merge: selection_merge,
selection: selection_selection,
order: selection_order,
sort: selection_sort,
call: selection_call,
nodes: selection_nodes,
node: selection_node,
size: selection_size,
empty: selection_empty,
each: selection_each,
attr: selection_attr,
style: selection_style,
property: selection_property,
classed: selection_classed,
text: selection_text,
html: selection_html,
raise: selection_raise,
lower: selection_lower,
append: selection_append,
insert: selection_insert,
remove: selection_remove,
clone: selection_clone,
datum: selection_datum,
on: selection_on,
dispatch: selection_dispatch,
[Symbol.iterator]: selection_iterator
};
function select(selector) {
return typeof selector === "string"
? new Selection$1([[document.querySelector(selector)]], [document.documentElement])
: new Selection$1([[selector]], root);
}
function create$1(name) {
return select(creator(name).call(document.documentElement));
}
function sourceEvent(event) {
let sourceEvent;
while (sourceEvent = event.sourceEvent) event = sourceEvent;
return event;
}
function pointer(event, node) {
event = sourceEvent(event);
if (node === undefined) node = event.currentTarget;
if (node) {
var svg = node.ownerSVGElement || node;
if (svg.createSVGPoint) {
var point = svg.createSVGPoint();
point.x = event.clientX, point.y = event.clientY;
point = point.matrixTransform(node.getScreenCTM().inverse());
return [point.x, point.y];
}
if (node.getBoundingClientRect) {
var rect = node.getBoundingClientRect();
return [event.clientX - rect.left - node.clientLeft, event.clientY - rect.top - node.clientTop];
}
}
return [event.pageX, event.pageY];
}
// These are typically used in conjunction with noevent to ensure that we can
const nonpassivecapture = {capture: true, passive: false};
function noevent$2(event) {
event.preventDefault();
event.stopImmediatePropagation();
}
function dragDisable(view) {
var root = view.document.documentElement,
selection = select(view).on("dragstart.drag", noevent$2, nonpassivecapture);
if ("onselectstart" in root) {
selection.on("selectstart.drag", noevent$2, nonpassivecapture);
} else {
root.__noselect = root.style.MozUserSelect;
root.style.MozUserSelect = "none";
}
}
function yesdrag(view, noclick) {
var root = view.document.documentElement,
selection = select(view).on("dragstart.drag", null);
if (noclick) {
selection.on("click.drag", noevent$2, nonpassivecapture);
setTimeout(function() { selection.on("click.drag", null); }, 0);
}
if ("onselectstart" in root) {
selection.on("selectstart.drag", null);
} else {
root.style.MozUserSelect = root.__noselect;
delete root.__noselect;
}
}
function define(constructor, factory, prototype) {
constructor.prototype = factory.prototype = prototype;
prototype.constructor = constructor;
}
function extend(parent, definition) {
var prototype = Object.create(parent.prototype);
for (var key in definition) prototype[key] = definition[key];
return prototype;
}
function Color() {}
var darker = 0.7;
var brighter = 1 / darker;
var reI = "\\s*([+-]?\\d+)\\s*",
reN = "\\s*([+-]?(?:\\d*\\.)?\\d+(?:[eE][+-]?\\d+)?)\\s*",
reP = "\\s*([+-]?(?:\\d*\\.)?\\d+(?:[eE][+-]?\\d+)?)%\\s*",
reHex = /^#([0-9a-f]{3,8})$/,
reRgbInteger = new RegExp(`^rgb\\(${reI},${reI},${reI}\\)$`),
reRgbPercent = new RegExp(`^rgb\\(${reP},${reP},${reP}\\)$`),
reRgbaInteger = new RegExp(`^rgba\\(${reI},${reI},${reI},${reN}\\)$`),
reRgbaPercent = new RegExp(`^rgba\\(${reP},${reP},${reP},${reN}\\)$`),
reHslPercent = new RegExp(`^hsl\\(${reN},${reP},${reP}\\)$`),
reHslaPercent = new RegExp(`^hsla\\(${reN},${reP},${reP},${reN}\\)$`);
var named = {
aliceblue: 0xf0f8ff,
antiquewhite: 0xfaebd7,
aqua: 0x00ffff,
aquamarine: 0x7fffd4,
azure: 0xf0ffff,
beige: 0xf5f5dc,
bisque: 0xffe4c4,
black: 0x000000,
blanchedalmond: 0xffebcd,
blue: 0x0000ff,
blueviolet: 0x8a2be2,
brown: 0xa52a2a,
burlywood: 0xdeb887,
cadetblue: 0x5f9ea0,
chartreuse: 0x7fff00,
chocolate: 0xd2691e,
coral: 0xff7f50,
cornflowerblue: 0x6495ed,
cornsilk: 0xfff8dc,
crimson: 0xdc143c,
cyan: 0x00ffff,
darkblue: 0x00008b,
darkcyan: 0x008b8b,
darkgoldenrod: 0xb8860b,
darkgray: 0xa9a9a9,
darkgreen: 0x006400,
darkgrey: 0xa9a9a9,
darkkhaki: 0xbdb76b,
darkmagenta: 0x8b008b,
darkolivegreen: 0x556b2f,
darkorange: 0xff8c00,
darkorchid: 0x9932cc,
darkred: 0x8b0000,
darksalmon: 0xe9967a,
darkseagreen: 0x8fbc8f,
darkslateblue: 0x483d8b,
darkslategray: 0x2f4f4f,
darkslategrey: 0x2f4f4f,
darkturquoise: 0x00ced1,
darkviolet: 0x9400d3,
deeppink: 0xff1493,
deepskyblue: 0x00bfff,
dimgray: 0x696969,
dimgrey: 0x696969,
dodgerblue: 0x1e90ff,
firebrick: 0xb22222,
floralwhite: 0xfffaf0,
forestgreen: 0x228b22,
fuchsia: 0xff00ff,
gainsboro: 0xdcdcdc,
ghostwhite: 0xf8f8ff,
gold: 0xffd700,
goldenrod: 0xdaa520,
gray: 0x808080,
green: 0x008000,
greenyellow: 0xadff2f,
grey: 0x808080,
honeydew: 0xf0fff0,
hotpink: 0xff69b4,
indianred: 0xcd5c5c,
indigo: 0x4b0082,
ivory: 0xfffff0,
khaki: 0xf0e68c,
lavender: 0xe6e6fa,
lavenderblush: 0xfff0f5,
lawngreen: 0x7cfc00,
lemonchiffon: 0xfffacd,
lightblue: 0xadd8e6,
lightcoral: 0xf08080,
lightcyan: 0xe0ffff,
lightgoldenrodyellow: 0xfafad2,
lightgray: 0xd3d3d3,
lightgreen: 0x90ee90,
lightgrey: 0xd3d3d3,
lightpink: 0xffb6c1,
lightsalmon: 0xffa07a,
lightseagreen: 0x20b2aa,
lightskyblue: 0x87cefa,
lightslategray: 0x778899,
lightslategrey: 0x778899,
lightsteelblue: 0xb0c4de,
lightyellow: 0xffffe0,
lime: 0x00ff00,
limegreen: 0x32cd32,
linen: 0xfaf0e6,
magenta: 0xff00ff,
maroon: 0x800000,
mediumaquamarine: 0x66cdaa,
mediumblue: 0x0000cd,
mediumorchid: 0xba55d3,
mediumpurple: 0x9370db,
mediumseagreen: 0x3cb371,
mediumslateblue: 0x7b68ee,
mediumspringgreen: 0x00fa9a,
mediumturquoise: 0x48d1cc,
mediumvioletred: 0xc71585,
midnightblue: 0x191970,
mintcream: 0xf5fffa,
mistyrose: 0xffe4e1,
moccasin: 0xffe4b5,
navajowhite: 0xffdead,
navy: 0x000080,
oldlace: 0xfdf5e6,
olive: 0x808000,
olivedrab: 0x6b8e23,
orange: 0xffa500,
orangered: 0xff4500,
orchid: 0xda70d6,
palegoldenrod: 0xeee8aa,
palegreen: 0x98fb98,
paleturquoise: 0xafeeee,
palevioletred: 0xdb7093,
papayawhip: 0xffefd5,
peachpuff: 0xffdab9,
peru: 0xcd853f,
pink: 0xffc0cb,
plum: 0xdda0dd,
powderblue: 0xb0e0e6,
purple: 0x800080,
rebeccapurple: 0x663399,
red: 0xff0000,
rosybrown: 0xbc8f8f,
royalblue: 0x4169e1,
saddlebrown: 0x8b4513,
salmon: 0xfa8072,
sandybrown: 0xf4a460,
seagreen: 0x2e8b57,
seashell: 0xfff5ee,
sienna: 0xa0522d,
silver: 0xc0c0c0,
skyblue: 0x87ceeb,
slateblue: 0x6a5acd,
slategray: 0x708090,
slategrey: 0x708090,
snow: 0xfffafa,
springgreen: 0x00ff7f,
steelblue: 0x4682b4,
tan: 0xd2b48c,
teal: 0x008080,
thistle: 0xd8bfd8,
tomato: 0xff6347,
turquoise: 0x40e0d0,
violet: 0xee82ee,
wheat: 0xf5deb3,
white: 0xffffff,
whitesmoke: 0xf5f5f5,
yellow: 0xffff00,
yellowgreen: 0x9acd32
};
define(Color, color, {
copy(channels) {
return Object.assign(new this.constructor, this, channels);
},
displayable() {
return this.rgb().displayable();
},
hex: color_formatHex, // Deprecated! Use color.formatHex.
formatHex: color_formatHex,
formatHex8: color_formatHex8,
formatHsl: color_formatHsl,
formatRgb: color_formatRgb,
toString: color_formatRgb
});
function color_formatHex() {
return this.rgb().formatHex();
}
function color_formatHex8() {
return this.rgb().formatHex8();
}
function color_formatHsl() {
return hslConvert(this).formatHsl();
}
function color_formatRgb() {
return this.rgb().formatRgb();
}
function color(format) {
var m, l;
format = (format + "").trim().toLowerCase();
return (m = reHex.exec(format)) ? (l = m[1].length, m = parseInt(m[1], 16), l === 6 ? rgbn(m) // #ff0000
: l === 3 ? new Rgb((m >> 8 & 0xf) | (m >> 4 & 0xf0), (m >> 4 & 0xf) | (m & 0xf0), ((m & 0xf) << 4) | (m & 0xf), 1) // #f00
: l === 8 ? rgba(m >> 24 & 0xff, m >> 16 & 0xff, m >> 8 & 0xff, (m & 0xff) / 0xff) // #ff000000
: l === 4 ? rgba((m >> 12 & 0xf) | (m >> 8 & 0xf0), (m >> 8 & 0xf) | (m >> 4 & 0xf0), (m >> 4 & 0xf) | (m & 0xf0), (((m & 0xf) << 4) | (m & 0xf)) / 0xff) // #f000
: null) // invalid hex
: (m = reRgbInteger.exec(format)) ? new Rgb(m[1], m[2], m[3], 1) // rgb(255, 0, 0)
: (m = reRgbPercent.exec(format)) ? new Rgb(m[1] * 255 / 100, m[2] * 255 / 100, m[3] * 255 / 100, 1) // rgb(100%, 0%, 0%)
: (m = reRgbaInteger.exec(format)) ? rgba(m[1], m[2], m[3], m[4]) // rgba(255, 0, 0, 1)
: (m = reRgbaPercent.exec(format)) ? rgba(m[1] * 255 / 100, m[2] * 255 / 100, m[3] * 255 / 100, m[4]) // rgb(100%, 0%, 0%, 1)
: (m = reHslPercent.exec(format)) ? hsla(m[1], m[2] / 100, m[3] / 100, 1) // hsl(120, 50%, 50%)
: (m = reHslaPercent.exec(format)) ? hsla(m[1], m[2] / 100, m[3] / 100, m[4]) // hsla(120, 50%, 50%, 1)
: named.hasOwnProperty(format) ? rgbn(named[format]) // eslint-disable-line no-prototype-builtins
: format === "transparent" ? new Rgb(NaN, NaN, NaN, 0)
: null;
}
function rgbn(n) {
return new Rgb(n >> 16 & 0xff, n >> 8 & 0xff, n & 0xff, 1);
}
function rgba(r, g, b, a) {
if (a <= 0) r = g = b = NaN;
return new Rgb(r, g, b, a);
}
function rgbConvert(o) {
if (!(o instanceof Col