pdbe-molstar/lib/extensions/complexes/coloring.d.ts

Molstar implementation for PDBe

import { PDBeMolstarPlugin } from '../..';
import { QueryParam } from '../../helpers';
export declare function colorComponents(viewer: PDBeMolstarPlugin, params: {
    structId: string;
    components: string[];
    mappings?: {
        [accession: string]: QueryParam[];
    };
    coreColor?: string;
    componentColors?: string[];
}): Promise<void>;
/**
Coloring - subcomplexes:
- base common -> by entity, lighter
- base additional -> gray, lighter
- sub common -> by entity, darker
- sub additional -> gray, darker (these are all unmapped components, includes antibodies and ligands)
*/
export declare function colorSubcomplex(viewer: PDBeMolstarPlugin, params: {
    baseStructId?: string;
    otherStructId?: string;
    baseComponents: string[];
    otherComponents: string[];
    baseMappings?: {
        [accession: string]: QueryParam[];
    };
    otherMappings?: {
        [accession: string]: QueryParam[];
    };
    coreColor?: string;
    componentColors?: string[];
}): Promise<void>;
/**
Coloring - supercomplexes:
- base common -> gray, lighter
- base additional -> unmapped color, lighter (these are all unmapped components, includes antibodies and ligands)
- super common -> gray, darker
- super additional mapped -> by entity, darker
- super additional unmapped -> unmapped color, darker
*/
export declare function colorSupercomplex(viewer: PDBeMolstarPlugin, params: {
    baseStructId?: string;
    otherStructId?: string;
    baseComponents: string[];
    otherComponents: string[];
    baseMappings?: {
        [accession: string]: QueryParam[];
    };
    otherMappings?: {
        [accession: string]: QueryParam[];
    };
    coreColor?: string;
    unmappedColor?: string;
    componentColors?: string[];
}): Promise<void>;