pdbe-molstar-3dbionotes/lib/spec.js

Molstar implementation for PDBe

"use strict";
Object.defineProperty(exports, "__esModule", { value: true });
exports.DefaultParams = exports.createPlugin = exports.DefaultPluginSpec = void 0;
var tslib_1 = require("tslib");
var React = tslib_1.__importStar(require("react"));
var ReactDOM = tslib_1.__importStar(require("react-dom"));
var volume_1 = require("Molstar/mol-plugin-ui/custom/volume");
var plugin_1 = require("Molstar/mol-plugin-ui/plugin");
var behavior_1 = require("Molstar/mol-plugin/behavior");
var transformers_1 = require("Molstar/mol-plugin/behavior/dynamic/volume-streaming/transformers");
var context_1 = require("Molstar/mol-plugin/context");
var spec_1 = require("Molstar/mol-plugin/spec");
var config_1 = require("Molstar/mol-plugin/config");
var labels_1 = require("./labels");
exports.DefaultPluginSpec = {
    actions: [],
    behaviors: [
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.Representation.HighlightLoci),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.Representation.SelectLoci),
        spec_1.PluginSpec.Behavior(labels_1.PDBeLociLabelProvider),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.Representation.FocusLoci),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.Camera.FocusLoci),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.CustomProps.AccessibleSurfaceArea),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.CustomProps.Interactions),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.CustomProps.SecondaryStructure),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.CustomProps.ValenceModel),
        spec_1.PluginSpec.Behavior(behavior_1.PluginBehaviors.CustomProps.CrossLinkRestraint)
    ],
    customParamEditors: [
        [transformers_1.CreateVolumeStreamingBehavior, volume_1.VolumeStreamingCustomControls]
    ],
    // animations: [],
    config: [
        [config_1.PluginConfig.VolumeStreaming.DefaultServer, 'https://www.ebi.ac.uk/pdbe/densities']
    ]
};
function createPlugin(target, spec) {
    var ctx = new context_1.PluginContext(spec || exports.DefaultPluginSpec);
    ReactDOM.render(React.createElement(plugin_1.Plugin, { plugin: ctx }), target);
    return ctx;
}
exports.createPlugin = createPlugin;
exports.DefaultParams = {
    moleculeId: undefined,
    superposition: undefined,
    superpositionParams: undefined,
    customData: undefined,
    ligandView: undefined,
    assemblyId: undefined,
    visualStyle: undefined,
    highlightColor: undefined,
    selectColor: undefined,
    hideStructure: undefined,
    hideCanvasControls: undefined,
    granularity: undefined,
    selection: undefined,
    mapSettings: undefined,
    pdbeUrl: 'https://www.ebi.ac.uk/pdbe/',
    bgColor: { r: 0, g: 0, b: 0 },
    encoding: 'bcif',
    selectInteraction: true,
    loadMaps: false,
    validationAnnotation: false,
    domainAnnotation: false,
    lowPrecisionCoords: false,
    expanded: false,
    hideControls: false,
    pdbeLink: true,
    loadCartoonsOnly: false,
    landscape: false,
    subscribeEvents: false
};
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