pdbe-molstar-3dbionotes/build/pdbe-molstar-component-build-1.1.0.js

Molstar implementation for PDBe

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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
 */
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
 */
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
 */
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
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 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
 */
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
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 * Code distributed by Google as part of the polymer project is also
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
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/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
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t=!1,this._markUpdated(),e}t&&(1&this._updateState||(this._updateState=1|this._updateState,this.firstUpdated(e)),this.updated(e))}_markUpdated(){this._changedProperties=new Map,this._updateState=-5&this._updateState}get updateComplete(){return this._getUpdateComplete()}_getUpdateComplete(){return this._updatePromise}shouldUpdate(t){return!0}update(t){void 0!==this._reflectingProperties&&this._reflectingProperties.size>0&&(this._reflectingProperties.forEach((t,e)=>this._propertyToAttribute(e,this[e],t)),this._reflectingProperties=void 0),this._markUpdated()}updated(t){}firstUpdated(t){}}W.finalized=!0;
/**
@license
Copyright (c) 2019 The Polymer Project Authors. All rights reserved.
This code may only be used under the BSD style license found at
http://polymer.github.io/LICENSE.txt The complete set of authors may be found at
http://polymer.github.io/AUTHORS.txt The complete set of contributors may be
found at http://polymer.github.io/CONTRIBUTORS.txt Code distributed by Google as
part of the polymer project is also subject to an additional IP rights grant
found at http://polymer.github.io/PATENTS.txt
*/
const z="adoptedStyleSheets"in Document.prototype&&"replace"in CSSStyleSheet.prototype;Symbol();
/**
 * @license
 * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
 * This code may only be used under the BSD style license found at
 * http://polymer.github.io/LICENSE.txt
 * The complete set of authors may be found at
 * http://polymer.github.io/AUTHORS.txt
 * The complete set of contributors may be found at
 * http://polymer.github.io/CONTRIBUTORS.txt
 * Code distributed by Google as part of the polymer project is also
 * subject to an additional IP rights grant found at
 * http://polymer.github.io/PATENTS.txt
 */
(window.litElementVersions||(window.litElementVersions=[])).push("2.3.1");const J={};class K extends W{static getStyles(){return this.styles}static _getUniqueStyles(){if(this.hasOwnProperty(JSCompiler_renameProperty("_styles",this)))return;const t=this.getStyles();if(void 0===t)this._styles=[];else if(Array.isArray(t)){const e=(t,i)=>t.reduceRight((t,i)=>Array.isArray(i)?e(i,t):(t.add(i),t),i),i=e(t,new Set),s=[];i.forEach(t=>s.unshift(t)),this._styles=s}else this._styles=[t]}initialize(){super.initialize(),this.constructor._getUniqueStyles(),this.renderRoot=this.createRenderRoot(),window.ShadowRoot&&this.renderRoot instanceof window.ShadowRoot&&this.adoptStyles()}createRenderRoot(){return this.attachShadow({mode:"open"})}adoptStyles(){const t=this.constructor._styles;0!==t.length&&(void 0===window.ShadyCSS||window.ShadyCSS.nativeShadow?z?this.renderRoot.adoptedStyleSheets=t.map(t=>t.styleSheet):this._needsShimAdoptedStyleSheets=!0:window.ShadyCSS.ScopingShim.prepareAdoptedCssText(t.map(t=>t.cssText),this.localName))}connectedCallback(){super.connectedCallback(),this.hasUpdated&&void 0!==window.ShadyCSS&&window.ShadyCSS.styleElement(this)}update(t){const e=this.render();super.update(t),e!==J&&this.constructor.render(e,this.renderRoot,{scopeName:this.localName,eventContext:this}),this._needsShimAdoptedStyleSheets&&(this._needsShimAdoptedStyleSheets=!1,this.constructor._styles.forEach(t=>{const e=document.createElement("style");e.textContent=t.cssText,this.renderRoot.appendChild(e)}))}render(){return J}}K.finalized=!0,K.render=(t,e,i)=>{if(!i||"object"!=typeof i||!i.scopeName)throw new Error("The `scopeName` option is required.");const s=i.scopeName,n=k.has(e),o=j&&11===e.nodeType&&!!e.host,a=o&&!F.has(s),l=a?document.createDocumentFragment():e;if(((t,e,i)=>{let s=k.get(e);void 0===s&&(r(e,e.firstChild),k.set(e,s=new A(Object.assign({templateFactory:U},i))),s.appendInto(e)),s.setValue(t),s.commit()})(t,l,Object.assign({templateFactory:q(s)},i)),a){const t=k.get(l);k.delete(l);const i=t.value instanceof S?t.value.template:void 0;$(s,l,i),r(e,e.firstChild),e.appendChild(l),k.set(e,t)}!n&&o&&window.ShadyCSS.styleElement(e.host)};class Q extends K{static get properties(){return{moleculeId:{type:String,attribute:"molecule-id"},assemblyId:{type:String,attribute:"assembly-id"},customDataUrl:{type:String,attribute:"custom-data-url"},customDataFormat:{type:String,attribute:"custom-data-format"},customDataBinary:{type:Boolean,attribute:"custom-data-binary"},ligandLabelCompId:{type:String,attribute:"ligand-label-comp-id"},ligandAuthAsymId:{type:String,attribute:"ligand-auth-asym-Id"},ligandAuthSeqId:{type:String,attribute:"ligand-auth-seq-id"},ligandHydrogens:{type:Boolean,attribute:"ligand-hydrogens"},pdbeUrl:{type:String,attribute:"pdbe-url"},bgColorR:{type:Number,attribute:"bg-color-r"},bgColorG:{type:Number,attribute:"bg-color-g"},bgColorB:{type:Number,attribute:"bg-color-b"},loadMaps:{type:Boolean,attribute:"load-maps"},validationAnnotation:{type:Boolean,attribute:"validation-annotation"},domainAnnotation:{type:Boolean,attribute:"domain-annotation"},lowPrecisionCoords:{type:Boolean,attribute:"low-precision"},expanded:{type:Boolean,attribute:"expanded"},hideControls:{type:Boolean,attribute:"hide-controls"},subscribeEvents:{type:Boolean,attribute:"subscribe-events"},pdbeLink:{type:Boolean,attribute:"pdbe-link"},loadCartoonsOnly:{type:Boolean,attribute:"load-cartoons-only"},selectInteraction:{type:Boolean,attribute:"select-interaction"},landscape:{type:Boolean,attribute:"landscape"},highlightColorR:{type:Number,attribute:"highlight-color-r"},highlightColorG:{type:Number,attribute:"highlight-color-g"},highlightColorB:{type:Number,attribute:"highlight-color-b"},selectColorR:{type:Number,attribute:"select-color-r"},selectColorG:{type:Number,attribute:"select-color-g"},selectColorB:{type:Number,attribute:"select-color-b"},hidePolymer:{type:Boolean,attribute:"hide-polymer"},hideWater:{type:Boolean,attribute:"hide-water"},hideHet:{type:Boolean,attribute:"hide-het"},hideCarbs:{type:Boolean,attribute:"hide-carbs"},hideNonStandard:{type:Boolean,attribute:"hide-non-standard"},hideCoarse:{type:Boolean,attribute:"hide-coarse"},visualStyle:{type:String,attribute:"visual-style"},hideExpandIcon:{type:Boolean,attribute:"hide-expand-icon"},hideSelectionIcon:{type:Boolean,attribute:"hide-selection-icon"},hideAnimationIcon:{type:Boolean,attribute:"hide-animation-icon"}}}validateParams(){return!(!this.moleculeId&&!this.customDataUrl)&&!(this.customDataUrl&&!this.customDataFormat)}formatParam(t){const e={ligandLabelCompId:"label_comp_id",ligandAuthAsymId:"auth_asym_id",ligandAuthSeqId:"auth_seq_id",ligandHydrogens:"hydrogens"},i=Object.keys(e),s={hidePolymer:"polymer",hideWater:"water",hideHet:"het",hideCarbs:"carbs",hideNonStandard:"nonStandard",hideCoarse:"coarse"},r=Object.keys(s),n={hideExpandIcon:"expand",hideSelectionIcon:"selection",hideAnimationIcon:"animation"},o=Object.keys(n);if("customDataUrl"==t||"customDataFormat"==t){if(this.initParams.customData)return;this.initParams.customData={url:this.customDataUrl,format:this.customDataFormat}}else if(i.indexOf(t)>-1){if(this.initParams.ligandView)return;this.initParams.ligandView=Object.assign({},{}),i.forEach(t=>{this[t]&&(this.initParams.ligandView[e[t]]=this[t])})}else if(["highlightColorR","highlightColorG","highlightColorB"].indexOf(t)>-1&&this.highlightColorR&&this.highlightColorG&&this.highlightColorB)this.initParams.highlightColor={r:this.highlightColorR,g:this.highlightColorG,b:this.highlightColorB};else if(["selectColorR","selectColorG","selectColorB"].indexOf(t)>-1&&this.selectColorR&&this.selectColorG&&this.selectColorB)this.initParams.selectColor={r:this.selectColorR,g:this.selectColorG,b:this.selectColorB};else if(["bgColorR","bgColorG","bgColorB"].indexOf(t)>-1&&this.bgColorR&&this.bgColorG&&this.bgColorB)this.initParams.bgColor={r:this.bgColorR,g:this.bgColorG,b:this.bgColorB};else if(r.indexOf(t)>-1){if(this.initParams.hideStructure)return;this.initParams.hideStructure=[],r.forEach(t=>{this[t]&&this.initParams.hideStructure.push(s[t])})}else if(o.indexOf(t)>-1){if(this.initParams.hideCanvasControls)return;this.initParams.hideCanvasControls=[],o.forEach(t=>{this[t]&&this.initParams.hideCanvasControls.push(n[t])})}}createParamModel(){const t=["customDataUrl","customDataFormat","ligandLabelCompId","bgColorR","bgColorG","bgColorB","ligandAuthAsymId","ligandAuthSeqId","ligandHydrogens","highlightColorR","highlightColorG","highlightColorB","selectColorR","selectColorG","selectColorB","hidePolymer","hideWater","hideHet","hideCarbs","hideNonStandard","hideCoarse","hideExpandIcon","hideSelectionIcon","hideAnimationIcon"],e=this.constructor.properties;if(e)for(let i in e)this[i]&&(this.initParams||(this.initParams=Object.assign({},{})),-1==t.indexOf(i)?this.initParams[i]=this[i]:this.formatParam(i))}connectedCallback(){super.connectedCallback(),this.createParamModel(),this.viewerInstance=new PDBeMolstarPlugin,this.validateParams()&&this.initParams&&this.viewerInstance.render(this,this.initParams)}createRenderRoot(){return this}}e.default=Q;customElements.define("pdbe-molstar",Q)}]);
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