molstar
Version:
A comprehensive macromolecular library.
179 lines (178 loc) • 16.2 kB
TypeScript
/**
* Copyright (c) 2020-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
*
* @author David Sehnal <david.sehnal@gmail.com>
* @author Alexander Rose <alexander.rose@weirdbyte.de>
*/
import { PresetProvider } from '../preset-provider';
import { PluginStateObject } from '../../objects';
import { ParamDefinition as PD } from '../../../mol-util/param-definition';
import { StateTransformer } from '../../../mol-state';
import { PluginContext } from '../../../mol-plugin/context';
export interface TrajectoryHierarchyPresetProvider<P = any, S = {}> extends PresetProvider<PluginStateObject.Molecule.Trajectory, P, S> {
}
export declare function TrajectoryHierarchyPresetProvider<P, S>(preset: TrajectoryHierarchyPresetProvider<P, S>): TrajectoryHierarchyPresetProvider<P, S>;
export declare namespace TrajectoryHierarchyPresetProvider {
type Params<P extends TrajectoryHierarchyPresetProvider> = P extends TrajectoryHierarchyPresetProvider<infer T> ? T : never;
type State<P extends TrajectoryHierarchyPresetProvider> = P extends TrajectoryHierarchyPresetProvider<infer _, infer S> ? S : never;
const CommonParams: (a: PluginStateObject.Molecule.Trajectory | undefined, plugin: PluginContext) => {
modelProperties: PD.Base<PD.Normalize<PD.Normalize<{
autoAttach: string[];
properties: PD.Normalize<{
[x: string]: /*elided*/ any;
}>;
}>> | undefined>;
structureProperties: PD.Base<PD.Normalize<PD.Normalize<{
autoAttach: string[];
properties: PD.Normalize<{
[x: string]: /*elided*/ any;
}>;
}>> | undefined>;
representationPreset: PD.Base<"auto" | "empty" | "illustrative" | "molecular-surface" | "atomic-detail" | "polymer-cartoon" | "polymer-and-ligand" | "protein-and-nucleic" | "coarse-surface" | "auto-lod" | undefined>;
};
}
export declare const PresetTrajectoryHierarchy: {
default: TrajectoryHierarchyPresetProvider<{
modelProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
structureProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
representationPreset: "auto" | "empty" | "illustrative" | "molecular-surface" | "atomic-detail" | "polymer-cartoon" | "polymer-and-ligand" | "protein-and-nucleic" | "coarse-surface" | "auto-lod" | undefined;
model: PD.Normalize<PD.Normalize<{
modelIndex: /*elided*/ any;
}>> | undefined;
showUnitcell: boolean | undefined;
structure: PD.NamedParams<PD.Normalize<{
dynamicBonds: /*elided*/ any;
}>, "auto"> | PD.NamedParams<PD.Normalize<{
dynamicBonds: /*elided*/ any;
id: /*elided*/ any;
}>, "assembly"> | PD.NamedParams<PD.Normalize<{
dynamicBonds: /*elided*/ any;
ijkMin: /*elided*/ any;
ijkMax: /*elided*/ any;
}>, "symmetry"> | PD.NamedParams<PD.Normalize<{
dynamicBonds: /*elided*/ any;
}>, "model"> | PD.NamedParams<PD.Normalize<{
dynamicBonds: /*elided*/ any;
radius: /*elided*/ any;
}>, "symmetry-mates"> | PD.NamedParams<PD.Normalize<{
dynamicBonds: /*elided*/ any;
generators: /*elided*/ any;
}>, "symmetry-assembly"> | undefined;
representationPresetParams: PD.Normalize<{
ignoreHydrogens: /*elided*/ any;
ignoreHydrogensVariant: /*elided*/ any;
ignoreLight: /*elided*/ any;
quality: /*elided*/ any;
theme: /*elided*/ any;
}> | undefined;
}, {
model: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
modelProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>> | undefined;
structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
representation: any;
}>;
'all-models': TrajectoryHierarchyPresetProvider<{
modelProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
structureProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
representationPreset: "auto" | "empty" | "illustrative" | "molecular-surface" | "atomic-detail" | "polymer-cartoon" | "polymer-and-ligand" | "protein-and-nucleic" | "coarse-surface" | "auto-lod" | undefined;
useDefaultIfSingleModel: boolean | undefined;
representationPresetParams: PD.Normalize<{
ignoreHydrogens: /*elided*/ any;
ignoreHydrogensVariant: /*elided*/ any;
ignoreLight: /*elided*/ any;
quality: /*elided*/ any;
theme: /*elided*/ any;
}> | undefined;
}, {
model: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
modelProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>> | undefined;
structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
representation: any;
} | {
models?: undefined;
structures?: undefined;
} | {
models: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>[];
structures: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>[];
}>;
unitcell: TrajectoryHierarchyPresetProvider<{
modelProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
structureProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
representationPreset: "auto" | "empty" | "illustrative" | "molecular-surface" | "atomic-detail" | "polymer-cartoon" | "polymer-and-ligand" | "protein-and-nucleic" | "coarse-surface" | "auto-lod" | undefined;
model: PD.Normalize<PD.Normalize<{
modelIndex: /*elided*/ any;
}>> | undefined;
}, {
model: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
modelProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>> | undefined;
structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
representation: any;
}>;
supercell: TrajectoryHierarchyPresetProvider<{
modelProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
structureProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
representationPreset: "auto" | "empty" | "illustrative" | "molecular-surface" | "atomic-detail" | "polymer-cartoon" | "polymer-and-ligand" | "protein-and-nucleic" | "coarse-surface" | "auto-lod" | undefined;
model: PD.Normalize<PD.Normalize<{
modelIndex: /*elided*/ any;
}>> | undefined;
}, {
model: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
modelProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>> | undefined;
structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
representation: any;
}>;
crystalContacts: TrajectoryHierarchyPresetProvider<{
modelProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
structureProperties: PD.Normalize<PD.Normalize<{
autoAttach: /*elided*/ any;
properties: /*elided*/ any;
}>> | undefined;
representationPreset: "auto" | "empty" | "illustrative" | "molecular-surface" | "atomic-detail" | "polymer-cartoon" | "polymer-and-ligand" | "protein-and-nucleic" | "coarse-surface" | "auto-lod" | undefined;
model: PD.Normalize<PD.Normalize<{
modelIndex: /*elided*/ any;
}>> | undefined;
}, {
model: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
modelProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Model, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>> | undefined;
structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, import("../../../mol-state").StateObject<any, import("../../../mol-state").StateObject.Type<any>>, any>>;
representation: any;
}>;
};
export type PresetTrajectoryHierarchy = typeof PresetTrajectoryHierarchy;