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molstar

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A comprehensive macromolecular library.

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import { __assign, __extends } from "tslib"; import { jsx as _jsx, jsxs as _jsxs, Fragment as _Fragment } from "react/jsx-runtime"; /** * Copyright (c) 2019-2020 mol* contributors, licensed under MIT, See LICENSE file for more info. * * @author Alexander Rose <alexander.rose@weirdbyte.de> */ import * as React from 'react'; import { Binding } from '../../mol-util/binding'; import { PluginUIComponent } from '../base'; import { StateSelection } from '../../mol-state'; import { SelectLoci } from '../../mol-plugin/behavior/dynamic/representation'; import { FocusLoci } from '../../mol-plugin/behavior/dynamic/representation'; import { Icon, ArrowDropDownSvg, ArrowRightSvg, CameraSvg } from '../controls/icons'; import { Button } from '../controls/common'; import { memoizeLatest } from '../../mol-util/memoize'; function getBindingsList(bindings) { return Object.keys(bindings).map(function (k) { return [k, bindings[k]]; }).filter(function (b) { return Binding.isBinding(b[1]); }); } var BindingsHelp = /** @class */ (function (_super) { __extends(BindingsHelp, _super); function BindingsHelp() { return _super !== null && _super.apply(this, arguments) || this; } BindingsHelp.prototype.getBindingComponents = function () { var bindingsList = getBindingsList(this.props.bindings); return _jsx(_Fragment, { children: bindingsList.map(function (value) { var name = value[0], binding = value[1]; return !Binding.isEmpty(binding) ? _jsxs("div", __assign({ style: { marginBottom: '6px' } }, { children: [_jsx("b", { children: binding.action }), _jsx("br", {}), _jsx("span", { dangerouslySetInnerHTML: { __html: Binding.format(binding, name) } })] }), name) : null; }) }); }; BindingsHelp.prototype.render = function () { return _jsx(HelpText, { children: this.getBindingComponents() }); }; return BindingsHelp; }(React.PureComponent)); export { BindingsHelp }; var HelpText = /** @class */ (function (_super) { __extends(HelpText, _super); function HelpText() { return _super !== null && _super.apply(this, arguments) || this; } HelpText.prototype.render = function () { return _jsx("div", __assign({ className: 'msp-help-text' }, { children: _jsx("div", { children: this.props.children }) })); }; return HelpText; }(React.PureComponent)); export { HelpText }; var HelpGroup = /** @class */ (function (_super) { __extends(HelpGroup, _super); function HelpGroup() { var _this = _super !== null && _super.apply(this, arguments) || this; _this.state = { header: _this.props.header, isExpanded: !!_this.props.initiallyExpanded }; _this.toggleExpanded = function () { return _this.setState({ isExpanded: !_this.state.isExpanded }); }; return _this; } HelpGroup.prototype.render = function () { return _jsxs("div", __assign({ className: 'msp-control-group-wrapper' }, { children: [_jsx("div", __assign({ className: 'msp-control-group-header' }, { children: _jsxs(Button, __assign({ onClick: this.toggleExpanded }, { children: [_jsx(Icon, { svg: this.state.isExpanded ? ArrowDropDownSvg : ArrowRightSvg }), this.props.header] })) })), this.state.isExpanded && _jsx("div", __assign({ className: 'msp-control-offset', style: { display: this.state.isExpanded ? 'block' : 'none' } }, { children: this.props.children }))] })); }; return HelpGroup; }(React.PureComponent)); export { HelpGroup }; function HelpSection(props) { return _jsx("div", __assign({ className: 'msp-simple-help-section' }, { children: props.header })); } var ViewportHelpContent = /** @class */ (function (_super) { __extends(ViewportHelpContent, _super); function ViewportHelpContent() { var _this = _super !== null && _super.apply(this, arguments) || this; _this.getInteractionBindings = memoizeLatest(function (cells) { var interactionBindings = void 0; cells.forEach(function (c) { var _a; var params = (_a = c.params) === null || _a === void 0 ? void 0 : _a.values; if ((params === null || params === void 0 ? void 0 : params.bindings) && Object.keys(params.bindings).length > 0) { if (!interactionBindings) interactionBindings = {}; Object.assign(interactionBindings, params.bindings); } }); return interactionBindings; }); return _this; } ViewportHelpContent.prototype.componentDidMount = function () { var _this = this; this.subscribe(this.plugin.events.canvas3d.settingsUpdated, function () { return _this.forceUpdate(); }); }; ViewportHelpContent.prototype.render = function () { var interactionBindings = this.getInteractionBindings(this.plugin.state.behaviors.cells); return _jsxs(_Fragment, { children: [(!this.props.selectOnly && this.plugin.canvas3d) && _jsx(HelpGroup, __assign({ header: 'Moving in 3D' }, { children: _jsx(BindingsHelp, { bindings: this.plugin.canvas3d.props.trackball.bindings }) }), 'trackball'), !!interactionBindings && _jsx(HelpGroup, __assign({ header: 'Mouse Controls' }, { children: _jsx(BindingsHelp, { bindings: interactionBindings }) }), 'interactions')] }); }; return ViewportHelpContent; }(PluginUIComponent)); export { ViewportHelpContent }; var HelpContent = /** @class */ (function (_super) { __extends(HelpContent, _super); function HelpContent() { return _super !== null && _super.apply(this, arguments) || this; } HelpContent.prototype.componentDidMount = function () { var _this = this; this.subscribe(this.plugin.events.canvas3d.settingsUpdated, function () { return _this.forceUpdate(); }); }; HelpContent.prototype.formatTriggers = function (binding) { return binding.triggers.map(function (t) { return Binding.Trigger.format(t); }).join(' or '); }; HelpContent.prototype.getTriggerFor = function (transformer, name) { var state = this.plugin.state.behaviors; var selections = state.select(StateSelection.Generators.ofTransformer(transformer)); var params = selections.length === 1 ? selections[0].params : undefined; var bindings = params ? params.values.bindings : {}; var binding = name in bindings ? bindings[name] : Binding.Empty; return this.formatTriggers(binding); }; HelpContent.prototype.render = function () { var selectToggleTriggers = this.getTriggerFor(SelectLoci, 'clickSelectToggle'); var focusTriggers = this.getTriggerFor(FocusLoci, 'clickFocus'); // TODO: interactive help, for example for density return _jsxs("div", { children: [_jsx(HelpSection, { header: 'Interface Controls' }), _jsxs(HelpGroup, __assign({ header: 'Inline Help' }, { children: [_jsx(HelpText, { children: "Many user interface elements show a little questionmark icon when hovered over. Clicking the icon toggles the display of an inline help text." }), _jsx(HelpText, { children: "Tooltips may provide additional information on a user interface element and are shown when hovering over it with the mouse." })] })), _jsx(HelpGroup, __assign({ header: 'Selections' }, { children: _jsxs(HelpText, { children: ["The viewer allows changing colors and representations for selections of atoms, residues or chains. Selections can be created by", _jsxs("ul", __assign({ style: { paddingLeft: '20px' } }, { children: [_jsxs("li", { children: ["picking elements on the 3D canvas or the sequence view using the mouse, e.g. toggle selection using ", selectToggleTriggers, " (for more see help section on ", _jsx("i", { children: "Mouse Controls" }), ")"] }), _jsxs("li", { children: ["using the ", _jsx("i", { children: "Add" }), ", ", _jsx("i", { children: "Remove" }), " and ", _jsx("i", { children: "Only" }), " dropdown buttons in the ", _jsx("i", { children: "Manage Selection" }), " panel which allow modifing the current selection by predefined sets"] })] }))] }) })), _jsx(HelpGroup, __assign({ header: 'Coloring' }, { children: _jsxs(HelpText, { children: ["There are two ways to color structures. Every representation (e.g. cartoon or spacefill) has a color theme which can be changed using the dropdown for each representation in the ", _jsx("i", { children: "Structure Settings" }), " panel. Additionally any selection atoms, residues or chains can by given a custom color. For that, first select the parts of the structure to be colored (see help section on ", _jsx("i", { children: "Selections" }), ") and, second, choose a color from the color dropdown botton in the ", _jsx("i", { children: "Selection" }), " row of the ", _jsx("i", { children: "Change Representation" }), " panel. The theme color can be seen as a base color that is overpainted by the custom color. Custom colors can be removed for a selection with the 'Clear' option in the color dropdown."] }) })), _jsx(HelpGroup, __assign({ header: 'Representations' }, { children: _jsxs(HelpText, { children: ["Structures can be shown with many different representations (e.g. cartoon or spacefill). The ", _jsx("i", { children: "Change Representation" }), " panel offers a collection of predefined styles which can be applied using the ", _jsx("i", { children: "Preset" }), " dropdown button. Additionally any selection atoms, residues or chains can by shown with a custom representation. For that, first select the parts of the structure to be mofified (see help section on ", _jsx("i", { children: "Selections" }), ") and, second, choose a representation to hide or show from the ", _jsx("i", { children: "Show" }), " and ", _jsx("i", { children: "Hide" }), " dropdown bottons in the ", _jsx("i", { children: "Selection" }), " row of the ", _jsx("i", { children: "Change Representation" }), " panel. The ", _jsx("i", { children: "Everything" }), " row applies the action to the whole structure instead of the current selection."] }) })), _jsx(HelpGroup, __assign({ header: 'Surroundings' }, { children: _jsxs(HelpText, { children: ["To show the surroundings of a residue or ligand, click it in the 3D scene or in the sequence widget using ", focusTriggers, "."] }) })), _jsx(HelpSection, { header: 'How-to Guides' }), _jsx(HelpGroup, __assign({ header: 'Create an Image' }, { children: _jsxs(HelpText, { children: [_jsxs("p", { children: ["Use the ", _jsx(Icon, { svg: CameraSvg }), " icon in the viewport to bring up the screenshot controls."] }), _jsxs("p", { children: ["To adjust the size of the image, use the ", _jsx("i", { children: "Resolution" }), " dropdown."] })] }) })), _jsx(HelpSection, { header: 'Mouse Controls' }), _jsx(ViewportHelpContent, {})] }); }; return HelpContent; }(PluginUIComponent)); export { HelpContent };