molstar
Version:
A comprehensive macromolecular library.
76 lines (75 loc) • 5.7 kB
TypeScript
/**
* Copyright (c) 2018-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
*
* @author Alexander Rose <alexander.rose@weirdbyte.de>
*/
import { ParamDefinition as PD } from '../../../mol-util/param-definition';
import { PluginBehavior } from '../../../mol-plugin/behavior/behavior';
import { PluginStateObject } from '../../../mol-plugin-state/objects';
import { PluginContext } from '../../../mol-plugin/context';
import { StateTransformer, StateAction, StateObject, StateTransform, StateObjectRef } from '../../../mol-state';
import { StructureRepresentationPresetProvider } from '../../../mol-plugin-state/builder/structure/representation-preset';
export declare const RCSBAssemblySymmetry: StateTransformer<PluginBehavior.Category, PluginBehavior.Behavior, {
autoAttach: boolean;
}>;
export declare const InitAssemblySymmetry3D: StateAction<PluginStateObject.Molecule.Structure, void, PD.Normalize<{}>>;
export { AssemblySymmetry3D };
declare type AssemblySymmetry3D = typeof AssemblySymmetry3D;
declare const AssemblySymmetry3D: StateTransformer<PluginStateObject.Molecule.Structure, PluginStateObject.Shape.Representation3D, PD.Normalize<{
visuals: ("axes" | "cage")[];
cageColor: import("../../../mol-util/color").Color;
scale: number;
doubleSided: boolean;
flipSided: boolean;
flatShaded: boolean;
ignoreLight: boolean;
xrayShaded: boolean;
alpha: number;
quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
axesColor: PD.NamedParams<PD.Normalize<unknown>, "byOrder"> | PD.NamedParams<PD.Normalize<{
colorValue: any;
}>, "uniform">;
}>>;
export declare const AssemblySymmetryPresetParams: {
ignoreHydrogens: PD.Base<boolean | undefined>;
quality: PD.Base<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined>;
theme: PD.Base<PD.Normalize<{
globalName: "occupancy" | "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
carbonColor: "chain-id" | "operator-name" | "element-symbol" | undefined;
symmetryColor: "occupancy" | "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
focus: PD.Normalize<{
name: any;
params: any;
}> | undefined;
}> | undefined>;
};
export declare const AssemblySymmetryPreset: StructureRepresentationPresetProvider<{
ignoreHydrogens: boolean | undefined;
quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
theme: PD.Normalize<{
globalName: any;
carbonColor: any;
symmetryColor: any;
focus: any;
}> | undefined;
}, {
components?: undefined;
representations?: undefined;
} | {
components: {
polymer: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>> | undefined;
} | {
all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>> | undefined;
branched: undefined;
} | undefined;
representations: {
assemblySymmetry: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>>;
} | {
assemblySymmetry: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>>;
polymer: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>>;
} | {
assemblySymmetry: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>>;
all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>>;
};
}>;
export declare function tryCreateAssemblySymmetry(plugin: PluginContext, structure: StateObjectRef<PluginStateObject.Molecule.Structure>, params?: StateTransformer.Params<AssemblySymmetry3D>, initialState?: Partial<StateTransform.State>): Promise<import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<StateObject<any, StateObject.Type<any>>, StateObject<any, StateObject.Type<any>>, any>>>;