molstar
Version:
A comprehensive macromolecular library.
75 lines • 3.5 kB
JavaScript
;
/**
* Copyright (c) 2017-2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
*
* @author David Sehnal <david.sehnal@gmail.com>
* @author Alexander Rose <alexander.rose@weirdbyte.de>
*/
Object.defineProperty(exports, "__esModule", { value: true });
var tslib_1 = require("tslib");
var Data = (0, tslib_1.__importStar)(require("../cif/data-model"));
var Schema = (0, tslib_1.__importStar)(require("../cif/schema"));
var db_1 = require("../../../mol-data/db");
var parser_1 = require("../cif/text/parser");
var columnData = "123abc d,e,f '4 5 6'";
// 123abc d,e,f '4 5 6'
var intField = Data.CifField.ofTokens({ data: columnData, indices: [0, 1, 1, 2, 2, 3], count: 3 });
var strField = Data.CifField.ofTokens({ data: columnData, indices: [3, 4, 4, 5, 5, 6], count: 3 });
var strListField = Data.CifField.ofTokens({ data: columnData, indices: [7, 12], count: 1 });
var intListField = Data.CifField.ofTokens({ data: columnData, indices: [14, 19], count: 1 });
var testBlock = Data.CifBlock(['test'], {
test: Data.CifCategory('test', 3, ['int', 'str', 'strList', 'intList'], {
int: intField,
str: strField,
strList: strListField,
intList: intListField
})
}, 'test');
var TestSchema;
(function (TestSchema) {
TestSchema.test = {
int: db_1.Column.Schema.int,
str: db_1.Column.Schema.str,
strList: db_1.Column.Schema.List(',', function (x) { return x; }),
intList: db_1.Column.Schema.List(' ', function (x) { return parseInt(x, 10); })
};
TestSchema.schema = { test: TestSchema.test };
})(TestSchema || (TestSchema = {}));
test('cif triple quote', function () { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
var data, result, cat;
return (0, tslib_1.__generator)(this, function (_a) {
switch (_a.label) {
case 0:
data = "data_test\n_test.field1 '''123 \" '' 1'''\n_test.field2 ''' c glide reflection through the plane (x,1/4,z)\nchosen as one of the generators of the space group'''";
return [4 /*yield*/, (0, parser_1.parseCifText)(data).run()];
case 1:
result = _a.sent();
if (result.isError) {
expect(false).toBe(true);
return [2 /*return*/];
}
cat = result.result.blocks[0].categories['test'];
expect(cat.getField('field1').str(0)).toBe("123 \" '' 1");
expect(cat.getField('field2').str(0)).toBe(" c glide reflection through the plane (x,1/4,z)\nchosen as one of the generators of the space group");
return [2 /*return*/];
}
});
}); });
describe('schema', function () {
var db = Schema.toDatabase(TestSchema.schema, testBlock);
it('property access', function () {
var _a = db.test, int = _a.int, str = _a.str, strList = _a.strList, intList = _a.intList;
expect(int.value(0)).toBe(1);
expect(str.value(1)).toBe('b');
expect(strList.value(0)).toEqual(['d', 'e', 'f']);
expect(intList.value(0)).toEqual([4, 5, 6]);
});
it('toArray', function () {
var ret = db.test.int.toArray({ array: Int32Array });
expect(ret.length).toBe(3);
expect(ret[0]).toBe(1);
expect(ret[1]).toBe(2);
expect(ret[2]).toBe(3);
});
});
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