lipdjs
Version:
A JavaScript library for reading and writing LiPD (Linked Paleo Data) files
2,755 lines • 91.9 kB
text/typescript
import { Store } from 'n3';
import { QueryEngine } from '@comunica/query-sparql';
interface AuthCredentials {
username: string;
password: string;
}
declare class RDFGraph {
protected store: Store;
protected quiet: boolean;
protected endpoint?: string;
protected engine: QueryEngine;
protected remote: boolean;
protected auth?: AuthCredentials;
constructor(store?: Store, quiet?: boolean, endpoint?: string, auth?: AuthCredentials);
/**
* Set authentication credentials for SPARQL endpoint
* @param auth Authentication credentials containing username and password
*/
setAuth(auth: AuthCredentials): void;
/**
* Clear authentication credentials
*/
clearAuth(): void;
/**
* Execute a SPARQL query
* @param queryStr SPARQL query string
* @returns Array containing results and raw dataframe
*/
protected query(queryStr: string): Promise<[any[], any]>;
/**
* Execute a SPARQL ASK query
* @param queryStr SPARQL ASK query string
* @returns Boolean result of the ASK query
*/
askQuery(queryStr: string): Promise<boolean>;
/**
* Execute a SPARQL Update query
* @param queryStr SPARQL Update query string
* @returns Boolean result of the Update query
*/
updateQuery(queryStr: string): Promise<void>;
/**
* Get the source configuration for queries
* @returns Array containing the store configuration
* @private
*/
private getConfiguration;
getStore(): Store;
/**
* Get id(s) from the graph and returns a new RDFGraph object
* @param ids Graph id(s) to get
* @returns RDFGraph object with the retrieved graph(s)
*/
get(ids: string | string[]): RDFGraph;
/**
* Removes id(s) from the graph
* @param ids Graph id(s) to be removed
*/
remove(ids: string | string[]): void;
/**
* Pops graph(s) from the combined graph and returns the popped RDF Graph
* @param ids Graph id(s) to be popped
* @returns RDFGraph object with the popped graph(s)
*/
pop(ids: string | string[]): RDFGraph;
/**
* Sets a SPARQL endpoint for a remote Knowledge Base (example: GraphDB)
* @param endpoint URL for the SPARQL endpoint
*
* @example
* ```typescript
* // Fetch LiPD data from remote RDF Graph
* const rdf = new RDFGraph();
* rdf.setEndpoint("https://linkedearth.graphdb.mint.isi.edu/repositories/LiPDVerse-dynamic");
* rdf.setRemote(true);
* const [result, resultDf] = await rdf.query("SELECT ?s ?p ?o WHERE {?s ?p ?o} LIMIT 10");
* ```
*/
setEndpoint(endpoint: string): void;
getEndpoint(): string | undefined;
setRemote(remote: boolean): void;
getRemote(): boolean;
}
declare class LiPDSeries extends RDFGraph {
private lipds;
constructor(graph?: Store);
/**
* Load LiPD data into the series
* @param lipd LiPD object to load
*/
load(lipd: LiPD): void;
}
declare class ArchiveType {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: ArchiveType): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): ArchiveType | null;
}
declare class ArchiveTypeConstants {
static Borehole: ArchiveType;
static Coral: ArchiveType;
static FluvialSediment: ArchiveType;
static GlacierIce: ArchiveType;
static GroundIce: ArchiveType;
static LakeSediment: ArchiveType;
static MarineSediment: ArchiveType;
static Midden: ArchiveType;
static MolluskShell: ArchiveType;
static Peat: ArchiveType;
static Sclerosponge: ArchiveType;
static Shoreline: ArchiveType;
static Speleothem: ArchiveType;
static TerrestrialSediment: ArchiveType;
static Wood: ArchiveType;
static Documents: ArchiveType;
static Other: ArchiveType;
}
declare class Change {
name: string | null;
notes: string[];
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Change;
static fromData(id: string, data: Record<string, any>): Change;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Change;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getName(): string | null;
setName(name: string): void;
getNotes(): string[];
setNotes(notes: string[]): void;
addNotes(notes: string): void;
}
declare class ChangeLog {
changes: Change[];
curator: string | null;
lastVersion: string | null;
notes: string | null;
timestamp: string | null;
version: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): ChangeLog;
static fromData(id: string, data: Record<string, any>): ChangeLog;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): ChangeLog;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getChanges(): Change[];
setChanges(changes: Change[]): void;
addChanges(changes: Change): void;
getCurator(): string | null;
setCurator(curator: string): void;
getLastVersion(): string | null;
setLastVersion(lastVersion: string): void;
getNotes(): string | null;
setNotes(notes: string): void;
getTimestamp(): string | null;
setTimestamp(timestamp: string): void;
getVersion(): string | null;
setVersion(version: string): void;
}
declare class Calibration {
dOI: string | null;
datasetRange: string | null;
equation: string | null;
equationIntercept: string | null;
equationR2: string | null;
equationSlope: string | null;
equationSlopeUncertainty: string | null;
method: string | null;
methodDetail: string | null;
notes: string | null;
proxyDataset: string | null;
seasonality: string | null;
targetDataset: string | null;
uncertainty: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Calibration;
static fromData(id: string, data: Record<string, any>): Calibration;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Calibration;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getDOI(): string | null;
setDOI(dOI: string): void;
getDatasetRange(): string | null;
setDatasetRange(datasetRange: string): void;
getEquation(): string | null;
setEquation(equation: string): void;
getEquationIntercept(): string | null;
setEquationIntercept(equationIntercept: string): void;
getEquationR2(): string | null;
setEquationR2(equationR2: string): void;
getEquationSlope(): string | null;
setEquationSlope(equationSlope: string): void;
getEquationSlopeUncertainty(): string | null;
setEquationSlopeUncertainty(equationSlopeUncertainty: string): void;
getMethod(): string | null;
setMethod(method: string): void;
getMethodDetail(): string | null;
setMethodDetail(methodDetail: string): void;
getNotes(): string | null;
setNotes(notes: string): void;
getProxyDataset(): string | null;
setProxyDataset(proxyDataset: string): void;
getSeasonality(): string | null;
setSeasonality(seasonality: string): void;
getTargetDataset(): string | null;
setTargetDataset(targetDataset: string): void;
getUncertainty(): string | null;
setUncertainty(uncertainty: string): void;
}
declare class Compilation {
name: string | null;
versions: string[];
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Compilation;
static fromData(id: string, data: Record<string, any>): Compilation;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Compilation;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getName(): string | null;
setName(name: string): void;
getVersions(): string[];
setVersions(versions: string[]): void;
addVersion(versions: string): void;
}
declare class InterpretationSeasonality {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: InterpretationSeasonality): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): InterpretationSeasonality | null;
}
declare class InterpretationSeasonalityConstants {
static Oct_May: InterpretationSeasonality;
static Jun: InterpretationSeasonality;
static Jul: InterpretationSeasonality;
static Aug: InterpretationSeasonality;
static Annual: InterpretationSeasonality;
static Winter: InterpretationSeasonality;
static Apr: InterpretationSeasonality;
static Apr_Aug: InterpretationSeasonality;
static Apr_Dec: InterpretationSeasonality;
static Apr_Feb: InterpretationSeasonality;
static Apr_Jan: InterpretationSeasonality;
static Apr_Jul: InterpretationSeasonality;
static Apr_Jun: InterpretationSeasonality;
static Apr_Mar: InterpretationSeasonality;
static Apr_May: InterpretationSeasonality;
static Apr_Nov: InterpretationSeasonality;
static Apr_Oct: InterpretationSeasonality;
static Apr_Sep: InterpretationSeasonality;
static Summer: InterpretationSeasonality;
static Aug_Apr: InterpretationSeasonality;
static Aug_Dec: InterpretationSeasonality;
static Aug_Feb: InterpretationSeasonality;
static Aug_Jan: InterpretationSeasonality;
static Aug_Jul: InterpretationSeasonality;
static Aug_Jun: InterpretationSeasonality;
static Aug_Mar: InterpretationSeasonality;
static Aug_May: InterpretationSeasonality;
static Aug_Nov: InterpretationSeasonality;
static Aug_Oct: InterpretationSeasonality;
static Aug_Sep: InterpretationSeasonality;
static Growing_Season: InterpretationSeasonality;
static Coldest_Month: InterpretationSeasonality;
static Dec_Apr: InterpretationSeasonality;
static Dec_Aug: InterpretationSeasonality;
static Dec_Feb: InterpretationSeasonality;
static Dec_Jan: InterpretationSeasonality;
static Dec_Jul: InterpretationSeasonality;
static Dec_Jun: InterpretationSeasonality;
static Dec_Mar: InterpretationSeasonality;
static Dec_May: InterpretationSeasonality;
static Dec_Oct: InterpretationSeasonality;
static Dec_Sep: InterpretationSeasonality;
static Fall: InterpretationSeasonality;
static Feb_Aug: InterpretationSeasonality;
static Feb_Apr: InterpretationSeasonality;
static Feb_Dec: InterpretationSeasonality;
static Feb_Jul: InterpretationSeasonality;
static Feb_Jun: InterpretationSeasonality;
static Feb_Mar: InterpretationSeasonality;
static Feb_May: InterpretationSeasonality;
static Feb_Nov: InterpretationSeasonality;
static Feb_Oct: InterpretationSeasonality;
static Feb_Sep: InterpretationSeasonality;
static Jan: InterpretationSeasonality;
static Jan_Apr: InterpretationSeasonality;
static Jan_Aug: InterpretationSeasonality;
static Jan_Feb: InterpretationSeasonality;
static Jan_Jul: InterpretationSeasonality;
static Jan_Jun: InterpretationSeasonality;
static Jan_Mar: InterpretationSeasonality;
static Jan_May: InterpretationSeasonality;
static Jan_Nov: InterpretationSeasonality;
static Jan_Oct: InterpretationSeasonality;
static Jan_Sep: InterpretationSeasonality;
static May_Sep: InterpretationSeasonality;
static Jul_Apr: InterpretationSeasonality;
static Jul_Aug: InterpretationSeasonality;
static Jul_Dec: InterpretationSeasonality;
static Jul_Feb: InterpretationSeasonality;
static Jul_Jan: InterpretationSeasonality;
static Jul_Jun: InterpretationSeasonality;
static Jul_Mar: InterpretationSeasonality;
static Jul_May: InterpretationSeasonality;
static Jul_Nov: InterpretationSeasonality;
static Jul_Oct: InterpretationSeasonality;
static Jul_Sep: InterpretationSeasonality;
static Jun_Apr: InterpretationSeasonality;
static Jun_Aug: InterpretationSeasonality;
static Jun_Sep: InterpretationSeasonality;
static Jun_Dec: InterpretationSeasonality;
static Jun_Feb: InterpretationSeasonality;
static Jun_Jan: InterpretationSeasonality;
static Jun_Jul: InterpretationSeasonality;
static Jun_Mar: InterpretationSeasonality;
static Jun_Nov: InterpretationSeasonality;
static Jun_Oct: InterpretationSeasonality;
static Mar: InterpretationSeasonality;
static Mar_Apr: InterpretationSeasonality;
static Mar_Aug: InterpretationSeasonality;
static Mar_Dec: InterpretationSeasonality;
static Mar_Jan: InterpretationSeasonality;
static Mar_Jul: InterpretationSeasonality;
static Mar_Jun: InterpretationSeasonality;
static Mar_May: InterpretationSeasonality;
static Mar_Nov: InterpretationSeasonality;
static Mar_Oct: InterpretationSeasonality;
static Mar_Sep: InterpretationSeasonality;
static May_Apr: InterpretationSeasonality;
static May_Aug: InterpretationSeasonality;
static May_Dec: InterpretationSeasonality;
static May_Oct: InterpretationSeasonality;
static May_Feb: InterpretationSeasonality;
static May_Jan: InterpretationSeasonality;
static May_Jul: InterpretationSeasonality;
static May_Jun: InterpretationSeasonality;
static May_Mar: InterpretationSeasonality;
static May_Nov: InterpretationSeasonality;
static needsToBeChanged: InterpretationSeasonality;
static Nov_Apr: InterpretationSeasonality;
static Nov_Aug: InterpretationSeasonality;
static Nov_Dec: InterpretationSeasonality;
static Nov_Feb: InterpretationSeasonality;
static Nov_Jan: InterpretationSeasonality;
static Nov_Jul: InterpretationSeasonality;
static Nov_Jun: InterpretationSeasonality;
static Nov_Mar: InterpretationSeasonality;
static Nov_May: InterpretationSeasonality;
static Nov_Oct: InterpretationSeasonality;
static Nov_Sep: InterpretationSeasonality;
static Oct_Apr: InterpretationSeasonality;
static Oct_Aug: InterpretationSeasonality;
static Oct_Dec: InterpretationSeasonality;
static Oct_Feb: InterpretationSeasonality;
static Oct_Jan: InterpretationSeasonality;
static Oct_Jul: InterpretationSeasonality;
static Oct_Jun: InterpretationSeasonality;
static Oct_Mar: InterpretationSeasonality;
static Oct_Nov: InterpretationSeasonality;
static Oct_Sep: InterpretationSeasonality;
static Sep_Apr: InterpretationSeasonality;
static Sep_Aug: InterpretationSeasonality;
static Sep_Dec: InterpretationSeasonality;
static Sep_Feb: InterpretationSeasonality;
static Sep_Jan: InterpretationSeasonality;
static Sep_Jul: InterpretationSeasonality;
static Sep_Jun: InterpretationSeasonality;
static Sep_Mar: InterpretationSeasonality;
static Sep_May: InterpretationSeasonality;
static Sep_Nov: InterpretationSeasonality;
static Sep_Oct: InterpretationSeasonality;
static Spr_Sum: InterpretationSeasonality;
static Spring: InterpretationSeasonality;
static subannual: InterpretationSeasonality;
static Warmest_Month: InterpretationSeasonality;
static Wet_Season: InterpretationSeasonality;
static Win_Spr: InterpretationSeasonality;
}
declare class InterpretationVariable {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: InterpretationVariable): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): InterpretationVariable | null;
}
declare class InterpretationVariableConstants {
static C3C4Ratio: InterpretationVariable;
static circulationIndex: InterpretationVariable;
static circulationVariable: InterpretationVariable;
static dissolvedOxygen: InterpretationVariable;
static dust: InterpretationVariable;
static ELA: InterpretationVariable;
static evaporation: InterpretationVariable;
static fire: InterpretationVariable;
static growingDegreeDays: InterpretationVariable;
static hydrologicBalance: InterpretationVariable;
static lakeWaterIsotope: InterpretationVariable;
static meltwater: InterpretationVariable;
static needsToBeReplaced: InterpretationVariable;
static P_E: InterpretationVariable;
static precipitation: InterpretationVariable;
static precipitationDeuteriumExcess: InterpretationVariable;
static precipitationIsotope: InterpretationVariable;
static productivity: InterpretationVariable;
static relativeHumidity: InterpretationVariable;
static salinity: InterpretationVariable;
static seaIce: InterpretationVariable;
static seasonality: InterpretationVariable;
static seawaterIsotope: InterpretationVariable;
static streamflow: InterpretationVariable;
static sunlight: InterpretationVariable;
static surfacePressure: InterpretationVariable;
static temperature: InterpretationVariable;
static upwelling: InterpretationVariable;
static windSpeed: InterpretationVariable;
}
declare class Interpretation {
basis: string | null;
direction: string | null;
local: string | null;
mathematicalRelation: string | null;
notes: string | null;
rank: string | null;
scope: string | null;
seasonality: InterpretationSeasonality | null;
seasonalityGeneral: InterpretationSeasonality | null;
seasonalityOriginal: InterpretationSeasonality | null;
variable: InterpretationVariable | null;
variableDetail: string | null;
variableGeneral: string | null;
variableGeneralDirection: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Interpretation;
static fromData(id: string, data: Record<string, any>): Interpretation;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Interpretation;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getBasis(): string | null;
setBasis(basis: string): void;
getDirection(): string | null;
setDirection(direction: string): void;
getMathematicalRelation(): string | null;
setMathematicalRelation(mathematicalRelation: string): void;
getNotes(): string | null;
setNotes(notes: string): void;
getRank(): string | null;
setRank(rank: string): void;
getScope(): string | null;
setScope(scope: string): void;
getSeasonality(): InterpretationSeasonality | null;
setSeasonality(seasonality: InterpretationSeasonality): void;
getSeasonalityGeneral(): InterpretationSeasonality | null;
setSeasonalityGeneral(seasonalityGeneral: InterpretationSeasonality): void;
getSeasonalityOriginal(): InterpretationSeasonality | null;
setSeasonalityOriginal(seasonalityOriginal: InterpretationSeasonality): void;
getVariable(): InterpretationVariable | null;
setVariable(variable: InterpretationVariable): void;
getVariableDetail(): string | null;
setVariableDetail(variableDetail: string): void;
getVariableGeneral(): string | null;
setVariableGeneral(variableGeneral: string): void;
getVariableGeneralDirection(): string | null;
setVariableGeneralDirection(variableGeneralDirection: string): void;
isLocal(): string | null;
setLocal(local: string): void;
}
declare class PaleoProxy {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: PaleoProxy): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): PaleoProxy | null;
}
declare class PaleoProxyConstants {
static accumulation_rate: PaleoProxy;
static ACL: PaleoProxy;
static Al2O3: PaleoProxy;
static alkenone: PaleoProxy;
static amoeba: PaleoProxy;
static Ba_Al: PaleoProxy;
static Ba_Ca: PaleoProxy;
static biomarker: PaleoProxy;
static BIT: PaleoProxy;
static borehole: PaleoProxy;
static BSi: PaleoProxy;
static bubble_frequency: PaleoProxy;
static bulk_density: PaleoProxy;
static bulk_sediment: PaleoProxy;
static C_N: PaleoProxy;
static Ca_K: PaleoProxy;
static Ca_Ti: PaleoProxy;
static CaCO3: PaleoProxy;
static calcification_rate: PaleoProxy;
static calcite: PaleoProxy;
static carbonate: PaleoProxy;
static cellulose: PaleoProxy;
static charcoal: PaleoProxy;
static chironomid: PaleoProxy;
static chlorophyll: PaleoProxy;
static chrysophyte_assemblage: PaleoProxy;
static cladoceran: PaleoProxy;
static coccolithophore: PaleoProxy;
static d13C: PaleoProxy;
static d15N: PaleoProxy;
static d15N_d40Ar: PaleoProxy;
static d18O: PaleoProxy;
static dD: PaleoProxy;
static deuterium_excess: PaleoProxy;
static diatom: PaleoProxy;
static dinocyst: PaleoProxy;
static dry_bulk_density: PaleoProxy;
static Eu_Zr: PaleoProxy;
static Fe: PaleoProxy;
static Fe_Al: PaleoProxy;
static foraminifera: PaleoProxy;
static GDGT: PaleoProxy;
static grain_size: PaleoProxy;
static HBI: PaleoProxy;
static historical: PaleoProxy;
static humification: PaleoProxy;
static ice_accumulation: PaleoProxy;
static ice_melt: PaleoProxy;
static inorganic_carbon: PaleoProxy;
static IP25: PaleoProxy;
static lake_level: PaleoProxy;
static latewood_cellulose: PaleoProxy;
static LDI: PaleoProxy;
static macrofossils: PaleoProxy;
static magnetic: PaleoProxy;
static magnetic_susceptibility: PaleoProxy;
static mass_accumulation_rate: PaleoProxy;
static maximum_latewood_density: PaleoProxy;
static Mg: PaleoProxy;
static Mg_Ca: PaleoProxy;
static multiproxy: PaleoProxy;
static Ti: PaleoProxy;
static needs_to_be_changed: PaleoProxy;
static needsToBeChanged: PaleoProxy;
static ostracod: PaleoProxy;
static P_aqueous: PaleoProxy;
static peat_ash: PaleoProxy;
static pH: PaleoProxy;
static pollen: PaleoProxy;
static radiolaria: PaleoProxy;
static Rb: PaleoProxy;
static Rb_Sr: PaleoProxy;
static reflectance: PaleoProxy;
static ring_width: PaleoProxy;
static Sr: PaleoProxy;
static Sr_Ca: PaleoProxy;
static stratigraphy: PaleoProxy;
static sulfur: PaleoProxy;
static TEX86: PaleoProxy;
static Ti_Al: PaleoProxy;
static Ti_Ca: PaleoProxy;
static TOC: PaleoProxy;
static total_nitrogen: PaleoProxy;
static varve_thickness: PaleoProxy;
}
declare class PaleoProxyGeneral {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: PaleoProxyGeneral): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): PaleoProxyGeneral | null;
}
declare class PaleoProxyGeneralConstants {
static biogenic: PaleoProxyGeneral;
static cryophysical: PaleoProxyGeneral;
static dendrophysical: PaleoProxyGeneral;
static elemental: PaleoProxyGeneral;
static faunal_assemblage: PaleoProxyGeneral;
static floral_assemblage: PaleoProxyGeneral;
static isotopic: PaleoProxyGeneral;
static mineral: PaleoProxyGeneral;
static pyrogenic: PaleoProxyGeneral;
static sedimentology: PaleoProxyGeneral;
}
declare class PaleoUnit {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: PaleoUnit): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): PaleoUnit | null;
}
declare class PaleoUnitConstants {
static atomic_ratio: PaleoUnit;
static cgs: PaleoUnit;
static cm: PaleoUnit;
static cm_kyr: PaleoUnit;
static cm_yr: PaleoUnit;
static cm3: PaleoUnit;
static count: PaleoUnit;
static count_century: PaleoUnit;
static count_cm2: PaleoUnit;
static count_cm2_yr: PaleoUnit;
static count_cm3: PaleoUnit;
static count_g: PaleoUnit;
static count_kyr: PaleoUnit;
static count_mL: PaleoUnit;
static count_yr: PaleoUnit;
static cps: PaleoUnit;
static day: PaleoUnit;
static degC: PaleoUnit;
static degree: PaleoUnit;
static fraction: PaleoUnit;
static g: PaleoUnit;
static g_cm_yr: PaleoUnit;
static g_cm2: PaleoUnit;
static g_cm2_kyr: PaleoUnit;
static g_cm2_yr: PaleoUnit;
static g_cm3: PaleoUnit;
static g_L: PaleoUnit;
static g_m2: PaleoUnit;
static g_m2_yr: PaleoUnit;
static grayscale: PaleoUnit;
static kg_m2_yr: PaleoUnit;
static kg_m3: PaleoUnit;
static km2: PaleoUnit;
static km3: PaleoUnit;
static log_mg_L_: PaleoUnit;
static m: PaleoUnit;
static m3_kg: PaleoUnit;
static mg: PaleoUnit;
static mg_cm2_yr: PaleoUnit;
static mg_g: PaleoUnit;
static mg_kg: PaleoUnit;
static mg_L: PaleoUnit;
static mm: PaleoUnit;
static mm_day: PaleoUnit;
static mm_season: PaleoUnit;
static mm_yr: PaleoUnit;
static mmol_mol: PaleoUnit;
static months_year: PaleoUnit;
static needsToBeChanged: PaleoUnit;
static ng: PaleoUnit;
static ng_g: PaleoUnit;
static peak_area: PaleoUnit;
static percent: PaleoUnit;
static permil: PaleoUnit;
static pH: PaleoUnit;
static ppb: PaleoUnit;
static ppm: PaleoUnit;
static practical_salinity_unit: PaleoUnit;
static ratio: PaleoUnit;
static SI: PaleoUnit;
static ug_cm2_yr: PaleoUnit;
static ug_g: PaleoUnit;
static um: PaleoUnit;
static umol_mol: PaleoUnit;
static unitless: PaleoUnit;
static yr_14C_BP: PaleoUnit;
static yr_AD: PaleoUnit;
static yr_b2k: PaleoUnit;
static yr_BP: PaleoUnit;
static yr_ka: PaleoUnit;
static z_score: PaleoUnit;
}
declare class PaleoVariable {
private id;
private label;
static synonyms: any;
constructor(id: string, label: string);
equals(value: PaleoVariable): boolean;
getLabel(): string;
getId(): string;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): string;
static fromSynonym(synonym: string): PaleoVariable | null;
}
declare class PaleoVariableConstants {
static ACL: PaleoVariable;
static AET_PET: PaleoVariable;
static ARM_IRM: PaleoVariable;
static ARSTAN: PaleoVariable;
static Al: PaleoVariable;
static Al2O3: PaleoVariable;
static As: PaleoVariable;
static BIT: PaleoVariable;
static BSi: PaleoVariable;
static Ba: PaleoVariable;
static Ba_Al: PaleoVariable;
static Ba_Ca: PaleoVariable;
static Be: PaleoVariable;
static Br: PaleoVariable;
static C20n_alkenoicAcid: PaleoVariable;
static C21n_alkanoicAcid: PaleoVariable;
static C22n_alkanoicAcid: PaleoVariable;
static C23n_alkanoicAcid: PaleoVariable;
static C24n_alkanoicAcid: PaleoVariable;
static C25_2n_alkanoicAcid: PaleoVariable;
static C25n_alkanoicAcid: PaleoVariable;
static C26n_alkanoicAcid: PaleoVariable;
static C27n_alkanoicAcid: PaleoVariable;
static C28n_alkanoicAcid: PaleoVariable;
static C29n_alkanoicAcid: PaleoVariable;
static C30n_alkanoicAcid: PaleoVariable;
static C31n_alkanoicAcid: PaleoVariable;
static C37Alkenone: PaleoVariable;
static C37_2Alkenone: PaleoVariable;
static C37_3aAlkenone: PaleoVariable;
static C37_3bAlkenone: PaleoVariable;
static C37_4Alkenone: PaleoVariable;
static CBT: PaleoVariable;
static CCA1: PaleoVariable;
static CCA2: PaleoVariable;
static CPI: PaleoVariable;
static C_N: PaleoVariable;
static Ca: PaleoVariable;
static CaCO3: PaleoVariable;
static CaO: PaleoVariable;
static Ca_K: PaleoVariable;
static Ca_Sr: PaleoVariable;
static Ca_Ti: PaleoVariable;
static Ti_Ca: PaleoVariable;
static Cd: PaleoVariable;
static Cd_Mn: PaleoVariable;
static Cl: PaleoVariable;
static Co: PaleoVariable;
static Cr: PaleoVariable;
static Cu: PaleoVariable;
static DWHI: PaleoVariable;
static Dd2H: PaleoVariable;
static EPS: PaleoVariable;
static ElNinoEvent: PaleoVariable;
static Eu_Zr: PaleoVariable;
static Fe: PaleoVariable;
static Fe2O3: PaleoVariable;
static Fe_Al: PaleoVariable;
static Fe_Ca: PaleoVariable;
static Fe_K: PaleoVariable;
static Fe_Mn: PaleoVariable;
static GDGT: PaleoVariable;
static GDGT_0_Cren: PaleoVariable;
static IP25: PaleoVariable;
static IRM: PaleoVariable;
static ITCZ: PaleoVariable;
static JulianDay: PaleoVariable;
static K2O: PaleoVariable;
static K37: PaleoVariable;
static K_Al: PaleoVariable;
static LDI: PaleoVariable;
static LOI: PaleoVariable;
static La: PaleoVariable;
static MAR: PaleoVariable;
static MBT: PaleoVariable;
static MS: PaleoVariable;
static Si: PaleoVariable;
static MXD: PaleoVariable;
static Mg: PaleoVariable;
static MgO: PaleoVariable;
static Mg_Ca: PaleoVariable;
static Mn: PaleoVariable;
static MnO: PaleoVariable;
static Mn_Fe: PaleoVariable;
static Mn_Mo: PaleoVariable;
static Mo: PaleoVariable;
static NO3: PaleoVariable;
static nitrate: PaleoVariable;
static N_C: PaleoVariable;
static Na2O: PaleoVariable;
static Ni: PaleoVariable;
static PC1: PaleoVariable;
static PC3: PaleoVariable;
static PC2: PaleoVariable;
static Paq: PaleoVariable;
static Pb: PaleoVariable;
static Picea_Artemisia: PaleoVariable;
static Picea_Pinus: PaleoVariable;
static Pinus_Artemisia: PaleoVariable;
static Poaceae_Ephedra: PaleoVariable;
static R570_R630: PaleoVariable;
static R650_R700: PaleoVariable;
static RABD660670: PaleoVariable;
static RAN15: PaleoVariable;
static RBAR: PaleoVariable;
static Rb: PaleoVariable;
static Rb87_Sr86: PaleoVariable;
static SO4: PaleoVariable;
static sulfate: PaleoVariable;
static salinity: PaleoVariable;
static Sc: PaleoVariable;
static Si_Al: PaleoVariable;
static Si_Ti: PaleoVariable;
static Sr: PaleoVariable;
static Sr_Ca: PaleoVariable;
static TDS: PaleoVariable;
static TEX86: PaleoVariable;
static TIC: PaleoVariable;
static TOC: PaleoVariable;
static organicCarbon: PaleoVariable;
static TOC_TN: PaleoVariable;
static Ti: PaleoVariable;
static TiO2: PaleoVariable;
static Ti_Al: PaleoVariable;
static Uk37: PaleoVariable;
static UK37: PaleoVariable;
static Uk37_: PaleoVariable;
static V: PaleoVariable;
static V_Al: PaleoVariable;
static Y: PaleoVariable;
static Zn: PaleoVariable;
static Zr: PaleoVariable;
static Zr_Al: PaleoVariable;
static accumulation: PaleoVariable;
static age: PaleoVariable;
static age14C: PaleoVariable;
static ammonium: PaleoVariable;
static amps: PaleoVariable;
static aragonite: PaleoVariable;
static ash: PaleoVariable;
static boron: PaleoVariable;
static brGDGT_IIIa: PaleoVariable;
static brGDGT_Id: PaleoVariable;
static brGDGT_IIIa_: PaleoVariable;
static brGDGT_IIIb: PaleoVariable;
static brGDGT_IIIb_: PaleoVariable;
static brGDGT_IIIc: PaleoVariable;
static brGDGT_IIIc_: PaleoVariable;
static brGDGT_IIa: PaleoVariable;
static brGDGT_IIa_: PaleoVariable;
static brGDGT_IIb: PaleoVariable;
static brGDGT_IIb_: PaleoVariable;
static brGDGT_IIc: PaleoVariable;
static brGDGT_IIc_: PaleoVariable;
static brGDGT_Ia: PaleoVariable;
static brGDGT_Ib: PaleoVariable;
static brGDGT_Ic: PaleoVariable;
static sampleID: PaleoVariable;
static bubbleNumberDensity: PaleoVariable;
static bulkDensity: PaleoVariable;
static calcificationRate: PaleoVariable;
static calcite: PaleoVariable;
static carbon: PaleoVariable;
static carbonate: PaleoVariable;
static charcoal: PaleoVariable;
static chloride: PaleoVariable;
static circulationIndex: PaleoVariable;
static clay: PaleoVariable;
static cluster: PaleoVariable;
static index: PaleoVariable;
static composite: PaleoVariable;
static concentration: PaleoVariable;
static core: PaleoVariable;
static correction: PaleoVariable;
static correlationCoefficient: PaleoVariable;
static sampleCount: PaleoVariable;
static count: PaleoVariable;
static d13C: PaleoVariable;
static d15N: PaleoVariable;
static d18O: PaleoVariable;
static d2H: PaleoVariable;
static d2HUncertaintyHigh80: PaleoVariable;
static d2HUncertaintyLow80: PaleoVariable;
static deleteMe: PaleoVariable;
static needsToBeChanged: PaleoVariable;
static deltaRelativeHumidity: PaleoVariable;
static deltaTemperature: PaleoVariable;
static density: PaleoVariable;
static depth: PaleoVariable;
static depthBottom: PaleoVariable;
static depthTop: PaleoVariable;
static deuteriumExcess: PaleoVariable;
static diatom: PaleoVariable;
static diatomCount: PaleoVariable;
static dinocyst: PaleoVariable;
static dolomite: PaleoVariable;
static dryBulkDensity: PaleoVariable;
static duration: PaleoVariable;
static dust: PaleoVariable;
static effectivePrecipitation: PaleoVariable;
static elevation: PaleoVariable;
static zscore: PaleoVariable;
static epsilonC28C22: PaleoVariable;
static epsilonC28C24: PaleoVariable;
static epsilonC29C23: PaleoVariable;
static equilibriumLineAltitude: PaleoVariable;
static event: PaleoVariable;
static eventLayer: PaleoVariable;
static facies: PaleoVariable;
static feldspar: PaleoVariable;
static flood: PaleoVariable;
static fluorine: PaleoVariable;
static foraminifera: PaleoVariable;
static gamma: PaleoVariable;
static glacierCoverage: PaleoVariable;
static globigerinoidesRuber: PaleoVariable;
static grainSize: PaleoVariable;
static lithics: PaleoVariable;
static grayscale: PaleoVariable;
static growing_degree_days: PaleoVariable;
static growthRate: PaleoVariable;
static hasGap: PaleoVariable;
static hasHiatus: PaleoVariable;
static hole: PaleoVariable;
static humidificationIndex: PaleoVariable;
static iceMelt: PaleoVariable;
static iceRaftedDebris: PaleoVariable;
static inc_coh: PaleoVariable;
static isReliable: PaleoVariable;
static lakeArea: PaleoVariable;
static lakeLevel: PaleoVariable;
static lakeTrend: PaleoVariable;
static lakeVolume: PaleoVariable;
static landscapeCover: PaleoVariable;
static percent: PaleoVariable;
static latitude: PaleoVariable;
static layerThickness: PaleoVariable;
static longitude: PaleoVariable;
static material: PaleoVariable;
static mineralogy: PaleoVariable;
static sulfur: PaleoVariable;
static needsToBeSplitIntoMultipleColumns: PaleoVariable;
static nitrogen: PaleoVariable;
static notes: PaleoVariable;
static organicMatter: PaleoVariable;
static organicNitrogen: PaleoVariable;
static oxygen: PaleoVariable;
static pH: PaleoVariable;
static peat: PaleoVariable;
static phosphorus: PaleoVariable;
static potassium: PaleoVariable;
static precipitation: PaleoVariable;
static productivity: PaleoVariable;
static pyrite: PaleoVariable;
static quartz: PaleoVariable;
static reflectance: PaleoVariable;
static relativeHumidity: PaleoVariable;
static residualChronology: PaleoVariable;
static ringWidth: PaleoVariable;
static sand: PaleoVariable;
static seaIce: PaleoVariable;
static section: PaleoVariable;
static sedimentDry: PaleoVariable;
static sedimentationRate: PaleoVariable;
static segmentLength: PaleoVariable;
static sequence: PaleoVariable;
static silt: PaleoVariable;
static site: PaleoVariable;
static siteCount: PaleoVariable;
static sodium: PaleoVariable;
static solarIrradiance: PaleoVariable;
static streamflow: PaleoVariable;
static temperature: PaleoVariable;
static thickness: PaleoVariable;
static totalCarbon: PaleoVariable;
static totalNitrogen: PaleoVariable;
static totalPollen: PaleoVariable;
static treeCover: PaleoVariable;
static uncertainty: PaleoVariable;
static uncertainty1s: PaleoVariable;
static uncertainty2s: PaleoVariable;
static uncertaintyHigh: PaleoVariable;
static uncertaintyHigh1s: PaleoVariable;
static uncertaintyLow95: PaleoVariable;
static uncertaintyHigh50: PaleoVariable;
static uncertaintyHigh90: PaleoVariable;
static uncertaintyHigh95: PaleoVariable;
static uncertaintyLow: PaleoVariable;
static uncertaintyLow1s: PaleoVariable;
static uncertaintyLow90: PaleoVariable;
static upwelling: PaleoVariable;
static uranium: PaleoVariable;
static varveThickness: PaleoVariable;
static volume: PaleoVariable;
static waterContent: PaleoVariable;
static waterTableDepth: PaleoVariable;
static wetBulkDensity: PaleoVariable;
static year: PaleoVariable;
}
declare class PhysicalSample {
housedAt: string | null;
iGSN: string | null;
name: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): PhysicalSample;
static fromData(id: string, data: Record<string, any>): PhysicalSample;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): PhysicalSample;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getHousedAt(): string | null;
setHousedAt(housedAt: string): void;
getIGSN(): string | null;
setIGSN(iGSN: string): void;
getName(): string | null;
setName(name: string): void;
}
declare class Resolution {
maxValue: number | null;
meanValue: number | null;
medianValue: number | null;
minValue: number | null;
units: PaleoUnit | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Resolution;
static fromData(id: string, data: Record<string, any>): Resolution;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Resolution;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getMaxValue(): number | null;
setMaxValue(maxValue: number): void;
getMeanValue(): number | null;
setMeanValue(meanValue: number): void;
getMedianValue(): number | null;
setMedianValue(medianValue: number): void;
getMinValue(): number | null;
setMinValue(minValue: number): void;
getUnits(): PaleoUnit | null;
setUnits(units: PaleoUnit): void;
}
declare class Variable {
archiveType: ArchiveType | null;
calibratedVias: Calibration[];
columnNumber: number | null;
composite: boolean | null;
description: string | null;
foundInDataset: object | null;
foundInTable: object | null;
instrument: object | null;
interpretations: Interpretation[];
maxValue: number | null;
meanValue: number | null;
medianValue: number | null;
minValue: number | null;
missingValue: string | null;
name: string | null;
notes: string | null;
partOfCompilations: Compilation[];
physicalSamples: PhysicalSample[];
primary: boolean | null;
proxy: PaleoProxy | null;
proxyGeneral: PaleoProxyGeneral | null;
resolution: Resolution | null;
standardVariable: PaleoVariable | null;
uncertainty: string | null;
uncertaintyAnalytical: string | null;
uncertaintyReproducibility: string | null;
units: PaleoUnit | null;
values: string | null;
variableId: string | null;
variableType: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Variable;
static fromData(id: string, data: Record<string, any>): Variable;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Variable;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getArchiveType(): ArchiveType | null;
setArchiveType(archiveType: ArchiveType): void;
getCalibratedVias(): Calibration[];
setCalibratedVias(calibratedVias: Calibration[]): void;
addCalibratedVia(calibratedVias: Calibration): void;
getColumnNumber(): number | null;
setColumnNumber(columnNumber: number): void;
getDescription(): string | null;
setDescription(description: string): void;
getFoundInDataset(): object | null;
setFoundInDataset(foundInDataset: object): void;
getFoundInTable(): object | null;
setFoundInTable(foundInTable: object): void;
getInstrument(): object | null;
setInstrument(instrument: object): void;
getInterpretations(): Interpretation[];
setInterpretations(interpretations: Interpretation[]): void;
addInterpretation(interpretations: Interpretation): void;
getMaxValue(): number | null;
setMaxValue(maxValue: number): void;
getMeanValue(): number | null;
setMeanValue(meanValue: number): void;
getMedianValue(): number | null;
setMedianValue(medianValue: number): void;
getMinValue(): number | null;
setMinValue(minValue: number): void;
getMissingValue(): string | null;
setMissingValue(missingValue: string): void;
getName(): string | null;
setName(name: string): void;
getNotes(): string | null;
setNotes(notes: string): void;
getPartOfCompilations(): Compilation[];
setPartOfCompilations(partOfCompilations: Compilation[]): void;
addPartOfCompilation(partOfCompilations: Compilation): void;
getPhysicalSamples(): PhysicalSample[];
setPhysicalSamples(physicalSamples: PhysicalSample[]): void;
addPhysicalSample(physicalSamples: PhysicalSample): void;
getProxy(): PaleoProxy | null;
setProxy(proxy: PaleoProxy): void;
getProxyGeneral(): PaleoProxyGeneral | null;
setProxyGeneral(proxyGeneral: PaleoProxyGeneral): void;
getResolution(): Resolution | null;
setResolution(resolution: Resolution): void;
getStandardVariable(): PaleoVariable | null;
setStandardVariable(standardVariable: PaleoVariable): void;
getUncertainty(): string | null;
setUncertainty(uncertainty: string): void;
getUncertaintyAnalytical(): string | null;
setUncertaintyAnalytical(uncertaintyAnalytical: string): void;
getUncertaintyReproducibility(): string | null;
setUncertaintyReproducibility(uncertaintyReproducibility: string): void;
getUnits(): PaleoUnit | null;
setUnits(units: PaleoUnit): void;
getValues(): string | null;
setValues(values: string): void;
getVariableId(): string | null;
setVariableId(variableId: string): void;
getVariableType(): string | null;
setVariableType(variableType: string): void;
isComposite(): boolean | null;
setComposite(composite: boolean): void;
isPrimary(): boolean | null;
setPrimary(primary: boolean): void;
}
interface VariableMetadata {
hasValues?: boolean;
[key: string]: any;
}
type DataFrameData = {
[K in string]: any[];
};
interface DataFrame {
data: DataFrameData;
metadata: Record<string, VariableMetadata>;
}
interface DataList {
data: any[];
metadata: VariableMetadata[];
}
declare class DataTable {
fileName: string | null;
missingValue: string | null;
variables: Variable[];
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): DataTable;
static fromData(id: string, data: Record<string, any>): DataTable;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): DataTable;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getFileName(): string | null;
setFileName(fileName: string): void;
getMissingValue(): string | null;
setMissingValue(missingValue: string): void;
getVariables(): Variable[];
setVariables(variables: Variable[]): void;
addVariable(variables: Variable): void;
/**
* Get data as a DataFrame-like structure
* @param useStandardNames Whether to use standard variable names instead of custom names
* @returns Object containing data and metadata
*/
getDataFrame(useStandardNames?: boolean): DataFrame;
getDataList(): DataList;
/**
* Set data from a DataFrame-like structure
* @param data Object containing data and metadata
*/
setDataFrame(data: DataFrame): void;
/**
* Set data from a DataFrame-like structure
* @param data Object containing data and metadata
*/
setDataList(data: DataList): void;
}
declare class Model {
code: string | null;
distributionTables: DataTable[];
ensembleTables: DataTable[];
summaryTables: DataTable[];
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Model;
static fromData(id: string, data: Record<string, any>): Model;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Model;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getCode(): string | null;
setCode(code: string): void;
getDistributionTables(): DataTable[];
setDistributionTables(distributionTables: DataTable[]): void;
addDistributionTable(distributionTables: DataTable): void;
getEnsembleTables(): DataTable[];
setEnsembleTables(ensembleTables: DataTable[]): void;
addEnsembleTable(ensembleTables: DataTable): void;
getSummaryTables(): DataTable[];
setSummaryTables(summaryTables: DataTable[]): void;
addSummaryTable(summaryTables: DataTable): void;
}
declare class ChronData {
measurementTables: DataTable[];
modeledBy: Model[];
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): ChronData;
static fromData(id: string, data: Record<string, any>): ChronData;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): ChronData;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getMeasurementTables(): DataTable[];
setMeasurementTables(measurementTables: DataTable[]): void;
addMeasurementTable(measurementTables: DataTable): void;
getModeledBy(): Model[];
setModeledBy(modeledBy: Model[]): void;
addModeledBy(modeledBy: Model): void;
}
declare class Person {
name: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Person;
static fromData(id: string, data: Record<string, any>): Person;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Person;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getName(): string | null;
setName(name: string): void;
}
declare class Funding {
fundingAgency: string | null;
fundingCountry: string | null;
grants: string[];
investigators: Person[];
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Funding;
static fromData(id: string, data: Record<string, any>): Funding;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Funding;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getFundingAgency(): string | null;
setFundingAgency(fundingAgency: string): void;
getFundingCountry(): string | null;
setFundingCountry(fundingCountry: string): void;
getGrants(): string[];
setGrants(grants: string[]): void;
addGrant(grants: string): void;
getInvestigators(): Person[];
setInvestigators(investigators: Person[]): void;
addInvestigator(investigators: Person): void;
}
declare class Location {
continent: string | null;
coordinates: string | null;
coordinatesFor: object | null;
country: string | null;
countryOcean: string | null;
description: string | null;
elevation: string | null;
geometryType: string | null;
latitude: string | null;
locationName: string | null;
locationType: string | null;
longitude: string | null;
notes: string | null;
ocean: string | null;
siteName: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Location;
static fromData(id: string, data: Record<string, any>): Location;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Location;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getContinent(): string | null;
setContinent(continent: string): void;
getCoordinates(): string | null;
setCoordinates(coordinates: string): void;
getCoordinatesFor(): object | null;
setCoordinatesFor(coordinatesFor: object): void;
getCountry(): string | null;
setCountry(country: string): void;
getCountryOcean(): string | null;
setCountryOcean(countryOcean: string): void;
getDescription(): string | null;
setDescription(description: string): void;
getElevation(): string | null;
setElevation(elevation: string): void;
getGeometryType(): string | null;
setGeometryType(geometryType: string): void;
getLatitude(): string | null;
setLatitude(latitude: string): void;
getLocationName(): string | null;
setLocationName(locationName: string): void;
getLocationType(): string | null;
setLocationType(locationType: string): void;
getLongitude(): string | null;
setLongitude(longitude: string): void;
getNotes(): string | null;
setNotes(notes: string): void;
getOcean(): string | null;
setOcean(ocean: string): void;
getSiteName(): string | null;
setSiteName(siteName: string): void;
}
declare class PaleoData {
measurementTables: DataTable[];
modeledBy: Model[];
name: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): PaleoData;
static fromData(id: string, data: Record<string, any>): PaleoData;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): PaleoData;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getMeasurementTables(): DataTable[];
setMeasurementTables(measurementTables: DataTable[]): void;
addMeasurementTable(measurementTables: DataTable): void;
getModeledBy(): Model[];
setModeledBy(modeledBy: Model[]): void;
addModeledBy(modeledBy: Model): void;
getName(): string | null;
setName(name: string): void;
}
declare class Publication {
abstract: string | null;
authors: Person[];
citation: string | null;
citeKey: string | null;
dOI: string | null;
dataUrls: string[];
firstAuthor: Person | null;
institution: string | null;
issue: string | null;
journal: string | null;
pages: string | null;
publicationType: string | null;
publisher: string | null;
report: string | null;
title: string | null;
urls: string[];
volume: string | null;
year: number | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Publication;
static fromData(id: string, data: Record<string, any>): Publication;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Publication;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getAbstract(): string | null;
setAbstract(abstract: string): void;
getAuthors(): Person[];
setAuthors(authors: Person[]): void;
addAuthor(authors: Person): void;
getCitation(): string | null;
setCitation(citation: string): void;
getCiteKey(): string | null;
setCiteKey(citeKey: string): void;
getDOI(): string | null;
setDOI(dOI: string): void;
getDataUrls(): string[];
setDataUrls(dataUrls: string[]): void;
addDataUrl(dataUrls: string): void;
getFirstAuthor(): Person | null;
setFirstAuthor(firstAuthor: Person): void;
getInstitution(): string | null;
setInstitution(institution: string): void;
getIssue(): string | null;
setIssue(issue: string): void;
getJournal(): string | null;
setJournal(journal: string): void;
getPages(): string | null;
setPages(pages: string): void;
getPublicationType(): string | null;
setPublicationType(publicationType: string): void;
getPublisher(): string | null;
setPublisher(publisher: string): void;
getReport(): string | null;
setReport(report: string): void;
getTitle(): string | null;
setTitle(title: string): void;
getUrls(): string[];
setUrls(urls: string[]): void;
addUrl(urls: string): void;
getVolume(): string | null;
setVolume(volume: string): void;
getYear(): number | null;
setYear(year: number): void;
}
declare class Dataset {
archiveType: ArchiveType | null;
changeLogs: ChangeLog[];
chronData: ChronData[];
collectionName: string | null;
collectionYear: string | null;
compilationNest: string | null;
contributors: Person[];
creators: Person[];
dataSource: string | null;
datasetId: string | null;
fundings: Funding[];
investigators: Person[];
location: Location | null;
name: string | null;
notes: string | null;
originalDataUrl: string | null;
paleoData: PaleoData[];
publications: Publication[];
spreadsheetLink: string | null;
version: string | null;
protected _id: string;
protected _type: string;
protected _misc: Record<string, any>;
protected _ontns: string;
protected _ns: string;
constructor();
getId(): string;
getType(): string;
getMisc(): Record<string, any>;
static fromDictionary(data: Record<string, any>): Dataset;
static fromData(id: string, data: Record<string, any>): Dataset;
toData(data?: Record<string, any>): Record<string, any>;
toJson(): Record<string, any>;
static fromJson(data: Record<string, any>): Dataset;
setNonStandardProperty(key: string, value: unknown): void;
getNonStandardProperty(key: string): unknown;
getAllNonStandardProperties(): Record<string, unknown>;
addNonStandardProperty(key: string, value: unknown): void;
getArchiveType(): ArchiveType | null;
setArchiveType(archiveType: ArchiveType): void;
getChangeLogs(): ChangeLog[];
setChangeLogs(changeLogs: ChangeLog[]): void;
addChangeLog(changeLogs: ChangeLog): void;
getChronData(): ChronData[];
setChronData(chronData: ChronData[]): void;
addChronData(chronData: ChronData): void;
getCollectionName(): string | null;
setCollectionName(collectionName: string): void;
getCollectionYear(): string | null;
setCollectionYear(collectionYear: string): void;
getCompilationNest(): string | null;
setCompilationNest(compilationNest: string): void;
getContributors(): Person[];
setContributors(contributors: Person[]): void;
addContributor(contributors: Person): void;
getCreators(): Person[];
setCreators(creators: Person[]): void;
addCreator(creators: Person): void;
getDataSource(): string | null;
setDataSource(dataSource: string): void;
getDatasetId(): string | null;
setDatasetId(datasetId: string): void;
getFundings(): Funding[];
setFundings(fundings: Funding[]): void;
addFunding(fundings: Funding): void;
getInvestigators(): Person[];
setInvestigators(investigators: Person[]): void;
addInvestigator(investigators: Person): void;
getLocation(): Location | null;
setLocation(location: Location): void;
getName(): string | null;
setName(name: string): void;
getNotes(): string | null;
setNotes(notes: string): void;
getOriginalDataUrl(): string | null;
setOriginalDataUrl(originalDataUrl: string): void;
getPaleoData(): PaleoData[];
setPaleoData(paleoData: PaleoData[]): void;
addPaleoData(paleoData: PaleoData): void;
getPublications(): Publication[];
setPublications(publications: Publication[]): void;
addPublication(publications: Publication): void;
getSpreadsheetLink(): string | null;
setSpreadsheetLink(spreadsheetLink: string): void;
getVersion(): string | null;
setVersion(version: string): void;
}
declare class LiPD extends RDFGraph {
/**
* The LiPD class describes a LiPD (Linked Paleo Data) object. It contains an RDF Graph which is serialization
* of the LiPD data into an RDF graph containing terms from the LiPD Ontology.
* @param store Optional N3 store to initialize with
* @param quiet Whether to suppress log messages
* @param endpoint Optional SPARQL endpoint URL
* @param auth Optional authentication credentials for the SPARQL endpoint
*/
constructor(store?: Store, quiet?: boolean, endpoint?: string, auth?: AuthCredentials);
/**
* Load LiPD files from a directory
* @param dirPath Path to the directory containing LiPD files
* @param standardize Whether to standardize the data
* @param addLabels Whether to add labels
*/
loadFromDir(dirPath: string, standardize?: boolean, addLabels?: boolean): Promise<void>;
/**
* Load LiPD files
* @param lipdFiles Array of paths to LiPD files (can also be URLs)
* @param standardize Whether to standardize the data
* @param addLabels Whether to add labels
*/
load(lipdFiles: string | string[], standardize?: boolean, addLabels?: boolean): Promise<void>;
/**
* Load LiPD file from a File object (for browser file input)
* @param file File object from HTML5 file input
* @param standardize Whether to standardize the data
* @param addLabels Whether to add labels
*/
loadFromFile(file: File, standardize?: boolean, addLabels?: boolean): Promise<void>;
/**
* Get LiPD JSON for a dataset
* @param dsname Dataset ID
* @returns LiPD JSON
*/
getLipd(dsname: string): any;
/**
* Create LiPD file for a dataset
* @param dsname Dataset ID
* @param lipdFile Path to LiPD file
* @returns LiPD JSON
*/
createLipd(dsname: string, lipdFile: string): Promise<any>;
/**
* Get dataset(s) from the graph and returns the popped LiPD object
* @param dsnames Dataset name(s) to get
* @returns LiPD object with the retrieved dataset(s)
*/
get(dsnames: string | string[]): LiPD;
/**
* Pop dataset(s) from the graph and returns the popped LiPD object
* @param dsnames Dataset name(s) to be popped
* @returns LiPD object with the popped dataset(s)
*/
pop(dsnames: string | string[]): LiPD;
/**
* Remove dataset(s) from the graph
* @param dsnames Dataset name(s) to be removed
*/
remove(dsnames: string | string[]): void;
/**
* Get all dataset names
* @returns List of dataset names
*/
getAllDatasetNames(): Promise<string[]>;
/**
* Get all dataset IDs
* @returns List of dataset IDs
*/
getAllDatasetIds(): Promise<string[]>;
/**
* Get all archive types
* @returns List of archive types
*/
getAllArchiveTypes(): Promise<string[]>;
/**
* Get all datasets as Dataset class instances
* @returns List of Dataset objects
*
* @example
* ```typescript
* const lipd = new LiPD();
* lipd.load('path/to/file.lpd').then(() => {
* lipd.getDatasets().then(datasets => {
* // Work with dataset objects
* console.log(datasets[0].getName());
* });
* });
* ```
*/
getDatasets(): Promise<Dataset[]>;
/**
* Loads instances of Dataset class into the LiPD graph
* @param datasets List of Dataset objects
*
* @example
* ```typescript
* // Load datasets from one LiPD object to another
* const lipd1 = new LiPD();
* lipd1.load('path/to/file.lpd').then(() => {
* lipd1.getDatasets().then(datasets => {
* // Modify datasets if needed
*
* // Create a new LiPD instance and load the datasets
* const lipd2 = new LiPD();
* lipd2.loadDatasets(datasets);
* });
* });
* ```
*/
loadDatasets(datasets: Dataset[]): void;
/**
* Generate a unique ID with a given prefix
* @param prefix Prefix for the ID (default: 'PYD')
* @returns Unique formatted ID
* @private
*/
private _generateUniqueId;
/**
* Fix missing IDs in a dataset
* @param ds Dataset to fix
* @private
*/
private _fixMissingIds;
/**
* Convert the LiPD object to a LiPDSeries object
* @returns LiPDSeries object
*/
toLipdSeries(): LiPDSeries;
/**
* Filter datasets by name
* @param datasetName Dataset name to filter by
* @returns New LiPD object with filtered datasets
*/
filterByDatasetName(datasetName: string): Promise<LiPD>;
/**
* Filter datasets by compilation name
* @param compilationName Compilation name to filter by
* @returns New LiPD object with filtered datasets
*/
filterByCompilationName(compilationName: string): Promise<LiPD>;
serialize(type?: string): Promise<string>;
/**
* Filter datasets by time interval
* @param timeBound Minimum and maximum age values
* @param timeBoundType Type of querying to perform
* @param recordLength Minimum record length
* @returns New LiPD object with filtered datasets
*/
filterByTime(timeBound: [number, number], timeBoundType?: 'any' | 'entire' | 'entirely', recordLength?: number): Promise<LiPD>;
/**
* Updates local LiPD Graph for datasets to remote endpoint
* @param dsnames Array of dataset names
* @param batchSize Number of quads to include in each update batch (default: 100)
*
* @example
* ```typescript
* // Update datasets to remote endpoint
* const lipd = new LiPD();
* lipd.setEndpoint("https://linkedearth.graphdb.mint.isi.edu/repositories/LiPDVerse-dynamic");
* // Set authentication if needed
* lipd.setAuth({ username: "user", password: "pass" });
* lipd.updateRemoteDatasets(["MyDataset1", "MyDataset2"], 100);
* ```
*/
updateRemoteDatasets(dsnames: string | string[], batchSize?: number): Promise<void>;
/**
* Convert an array of quads to an N-Quads string
*/
private _quadsToNQuads;
/**
* Derive the /statements endpoint from this.endpoint
*/
private _getStatementsEndpoint;
/**
* Builds an INSERT DATA query for a batch of quads
* @param quads Array of quads to insert
* @param graphUri URI of the graph to insert into
* @returns SPARQL INSERT query
* @private
*/
private _buildInsertQuery;
/**
* Loads remote datasets into cache if a remote endpoint is set
* @param dsnames Array of dataset names
* @param loadDefaultGraph Whether to load the default graph (default: true)
*
* @example
* ```typescript
* // Fetch LiPD data from remote RDF Graph
* const lipd = new LiPD();
* lipd.setEndpoint("https://linkedearth.graphdb.mint.isi.edu/repositories/LiPDVerse-dynamic");
* // Set authentication if needed
* lipd.setAuth({ username: "user", password: "pass" });
* lipd.loadRemoteDatasets(["Ocn-MadangLagoonPapuaNewGuinea.Kuhnert.2001", "MD98_2181.Stott.2007"]);
* lipd.getAllDatasetNames().then(names => console.log(names));
* ```
*/
loadRemoteDatasets(dsnames: string | string[], loadDefaultGraph?: boolean): Promise<void>;
/**
* Build a full LiPD (BagIt) archive entirely in-memory – browser-safe
* @param dsname Dataset name to export
* @param opts Options { includeCsv?: boolean }
* @returns Blob in browsers, Buffer in Node
*/
createLipdBrowser(dsname: string, opts?: {
includeCsv?: boolean;
}): Promise<Blob | Uint8Array>;
private _generateCsvData;
private _tableToCsv;
/**
* Remove values from variables in a LiPD JSON object.
* This is necessary because values are typically stored in CSV files,
* not directly in the metadata.jsonld file.
* @param lipdJson The LiPD JSON object to process.
* @returns A new LiPD JSON object with values removed from variables.
* @private
*/
private _removeValuesFromVariables;
/**
* Helper to check if an object looks like a variable object.
* Variables typically have properties like variableId, variableName, values, units, etc.
* @param obj The object to check.
* @returns True if it looks like a variable object, false otherwise.
* @private
*/
private _isVariableObject;
}
/**
* Log levels enum
*/
declare enum LogLevel {
DEBUG = 0,
INFO = 1,
WARN = 2,
ERROR = 3
}
/**
* Logger class for handling logs in the extension
*/
declare class Logger {
private static instance;
private outputChannel;
private logLevel;
/**
* Get the singleton instance of Logger
*/
static getInstance(): Logger;
/**
* Private constructor to enforce singleton pattern
*/
private constructor();
/**
* Initialize the logger with an output channel
* @param channel VS Code output channel
* @param level Initial log level
*/
initialize(channel?: any, level?: LogLevel): void;
/**
* Set the current log level
* @param level Log level to set
*/
setLogLevel(level: LogLevel): void;
/**
* Get the current log level
* @returns Current log level
*/
getLogLevel(): LogLevel;
/**
* Log a debug message
* @param message Message to log
* @param args Additional arguments for formatting
*/
debug(message: string, ...args: any[]): void;
/**
* Log an info message
* @param message Message to log
* @param args Additional arguments for formatting
*/
info(message: string, ...args: any[]): void;
/**
* Log a warning message
* @param message Message to log
* @param args Additional arguments for formatting
*/
warn(message: string, ...args: any[]): void;
/**
* Log an error message
* @param message Message to log
* @param args Additional arguments for formatting
*/
error(message: string, ...args: any[]): void;
/**
* Show the output channel
*/
show(): void;
/**
* Internal log method
* @param level Log level as string
* @param message Message to log
* @param args Additional arguments for formatting
*/
private log;
/**
* Format a message with arguments (simple printf-like format)
* @param message Base message with placeholders
* @param args Arguments to insert
* @returns Formatted message
*/
private formatMessage;
}
interface SynonymEntry {
id: string;
label: string;
}
interface SynonymCollection {
[key: string]: SynonymEntry;
}
interface ArchiveTypes {
ArchiveType?: SynonymCollection;
}
interface InterpretationTypes {
InterpretationVariable?: SynonymCollection;
InterpretationSeasonality?: SynonymCollection;
}
interface VariableTypes {
PaleoVariable?: SynonymCollection;
ChronVariable?: SynonymCollection;
}
interface UnitTypes {
PaleoUnit?: SynonymCollection;
ChronUnit?: SynonymCollection;
}
interface ProxyTypes {
PaleoProxy?: SynonymCollection;
PaleoProxyGeneral?: SynonymCollection;
ChronProxy?: SynonymCollection;
ChronProxyGeneral?: SynonymCollection;
}
interface SynonymsType {
ARCHIVES: ArchiveTypes;
INTERPRETATION: InterpretationTypes;
VARIABLES?: VariableTypes;
PROXIES?: ProxyTypes;
UNITS?: UnitTypes;
}
declare const SCHEMA: {
Dataset: {
'@id': string[];
'@toJson_pre': string[];
datasetId: {
name: string;
};
dataSetName: {
name: string;
alternates: string[];
};
dataSource: {
name: string;
};
originalDataURL: {
name: string;
alternates: string[];
};
dataContributor: {
name: string;
schema: string;
alternates: string[];
fromJson: string;
multiple: boolean;
};
archiveType: {
name: string;
alternates: string[];
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
changelog: {
name: string;
schema: string;
multiple: boolean;
};
notes: {
name: string;
};
collectionName: {
name: string;
alternates: string[];
};
collectionYear: {
name: string;
};
investigator: {
name: string;
alternates: string[];
schema: string;
multiple: boolean;
fromJson: string;
};
creator: {
name: string;
schema: string;
multiple: boolean;
fromJson: string;
};
funding: {
name: string;
multiple: boolean;
schema: string;
};
pub: {
name: string;
multiple: boolean;
schema: string;
};
geo: {
name: string;
schema: string;
fromJson: string;
toJson: string;
};
paleoData: {
name: string;
multiple: boolean;
schema: string;
};
chronData: {
name: string;
multiple: boolean;
schema: string;
};
googleSpreadSheetKey: {
name: string;
fromJson: string;
toJson: string;
};
dataSetVersion: {
name: string;
};
compilation_nest: {
name: string;
alternates: string[];
};
};
Compilation: {
'@id': string[];
compilationName: {
name: string;
};
compilationVersion: {
name: string;
multiple: boolean;
};
};
ChangeLog: {
'@id': string[];
'@category': string;
curator: {
name: string;
};
version: {
name: string;
};
lastVersion: {
name: string;
};
timestamp: {
name: string;
};
changes: {
name: string;
multiple: boolean;
type: string;
schema: string;
fromJson: string;
toJson: string;
};
notes: {
name: string;
};
};
Change: {
'@id': string[];
name: {
name: string;
};
notes: {
name: string;
multiple: boolean;
};
};
Funding: {
'@id': string[];
agency: {
name: string;
alternates: string[];
};
grant: {
name: string;
multiple: boolean;
alternates: string[];
};
country: {
name: string;
alternates: string[];
};
investigator: {
name: string;
schema: string;
multiple: boolean;
fromJson: string;
};
};
Publication: {
'@id': string[];
title: {
name: string;
};
abstract: {
name: string;
};
institution: {
name: string;
};
issue: {
name: string;
};
journal: {
name: string;
};
volume: {
name: string;
type: string;
};
pages: {
name: string;
};
year: {
name: string;
type: string;
alternates: string[];
};
publisher: {
name: string;
};
report: {
name: string;
};
type: {
name: string;
};
citation: {
name: string;
type: string;
};
citeKey: {
name: string;
type: string;
};
url: {
name: string;
alternates: string[];
multiple: boolean;
};
dataUrl: {
name: string;
alternates: string[];
multiple: boolean;
};
doi: {
name: string;
type: string;
alternates: string[];
};
author: {
name: string;
alternates: string[];
schema: string;
multiple: boolean;
fromJson: string;
};
firstauthor: {
name: string;
alternates: string[];
schema: string;
fromJson: string;
};
};
PaleoData: {
'@id': string[];
paleoDataName: {
name: string;
};
measurementTable: {
alternates: string[];
name: string;
multiple: boolean;
schema: string;
};
model: {
alternates: string[];
name: string;
multiple: boolean;
schema: string;
};
};
ChronData: {
'@id': string[];
measurementTable: {
alternates: string[];
name: string;
multiple: boolean;
schema: string;
};
model: {
alternates: string[];
name: string;
multiple: boolean;
schema: string;
};
};
Model: {
'@id': string[];
method: {
name: string;
};
summaryTable: {
name: string;
multiple: boolean;
schema: string;
};
ensembleTable: {
name: string;
multiple: boolean;
schema: string;
};
distributionTable: {
name: string;
multiple: boolean;
schema: string;
};
};
DataTable: {
'@id': string[];
toJson: string[];
fromJson: string[];
filename: {
name: string;
};
columns: {
name: string;
multiple: boolean;
schema: string;
};
missingValue: {
name: string;
};
};
Variable: {
'@id': string[];
'@fromJson': string[];
'@toJson_pre': string[];
'@toJson': string[];
number: {
name: string;
type: string;
};
TSid: {
name: string;
alternates: string[];
};
variableName: {
name: string;
};
variableType: {
name: string;
};
archiveType: {
name: string;
alternates: string[];
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
units: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
missingValue: {
name: string;
};
hasMaxValue: {
name: string;
alternates: string[];
type: string;
};
hasMinValue: {
name: string;
alternates: string[];
type: string;
};
hasMeanValue: {
name: string;
alternates: string[];
type: string;
};
hasMedianValue: {
name: string;
alternates: string[];
type: string;
};
description: {
name: string;
};
isPrimary: {
name: string;
type: string;
};
isComposite: {
name: string;
type: string;
};
measurementInstrument: {
name: string;
type: string;
category: string;
};
calibration: {
name: string;
schema: string;
type: string;
multiple: boolean;
};
interpretation: {
name: string;
schema: string;
category: string;
type: string;
multiple: boolean;
};
resolution: {
name: string;
category: string;
schema: string;
type: string;
alternates: string[];
};
physicalSample: {
name: string;
schema: string;
category: string;
alternates: string[];
type: string;
multiple: boolean;
};
uncertainty: {
name: string;
};
uncertaintyAnalytical: {
name: string;
};
uncertaintyReproducibility: {
name: string;
};
proxy: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
proxyGeneral: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
inCompilationBeta: {
name: string;
schema: string;
category: string;
type: string;
multiple: boolean;
};
notes: {
name: string;
alternates: string[];
};
hasValues: {
type: string;
};
foundInTable: {
type: string;
};
foundInDataset: {
type: string;
};
hasStandardVariable: {
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
};
PhysicalSample: {
hasidentifier: {
name: string;
};
hasname: {
name: string;
};
housedat: {
name: string;
};
};
Resolution: {
'@id': string[];
'@toJson_pre': string[];
hasMaxValue: {
name: string;
alternates: string[];
type: string;
};
hasMinValue: {
name: string;
alternates: string[];
type: string;
};
hasMeanValue: {
name: string;
alternates: string[];
type: string;
};
hasMedianValue: {
name: string;
alternates: string[];
type: string;
};
units: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
};
Location: {
'@id': string[];
coordinates: {
type: string;
class_type: string;
};
coordinatesFor: {
type: string;
};
type: {
name: string;
};
continent: {
name: string;
};
country: {
name: string;
};
countryOcean: {
name: string;
};
description: {
name: string;
};
elevation: {
name: string;
};
geometryType: {
name: string;
};
latitude: {
name: string;
};
longitude: {
name: string;
};
locationName: {
name: string;
alternates: string[];
};
ocean: {
name: string;
alternates: string[];
};
siteName: {
name: string;
};
notes: {
name: string;
};
};
Interpretation: {
'@id': string[];
'@fromJson': string[];
'@toJson_pre': string[];
variable: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
variableGeneral: {
name: string;
alternates: string[];
};
variableGeneralDirection: {
name: string;
alternates: string[];
};
variableDetail: {
name: string;
alternates: string[];
};
seasonality: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
seasonalityOriginal: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
seasonalityGeneral: {
name: string;
type: string;
synonyms: SynonymCollection | undefined;
class_range: string;
skip_auto_convert_to_json: boolean;
};
notes: {
name: string;
};
rank: {
name: string;
};
basis: {
name: string;
};
scope: {
name: string;
};
mathematicalRelation: {
name: string;
};
direction: {
name: string;
alternates: string[];
};
isLocal: {
name: string;
alternates: string[];
};
};
Calibration: {
'@id': string[];
'@fromJson': string[];
'@toJson': string[];
datasetRange: {
name: string;
};
doi: {
name: string;
alternates: string[];
};
equation: {
name: string;
alternates: string[];
};
equationIntercept: {
name: string;
};
equationR2: {
name: string;
};
equationSlope: {
name: string;
};
equationSlopeUncertainty: {
name: string;
};
method: {
name: string;
};
methodDetail: {
name: string;
};
proxyDataset: {
name: string;
alternates: string[];
};
targetDataset: {
name: string;
alternates: string[];
};
hasSeasonality: {
name: string;
alternates: string[];
};
notes: {
name: string;
alternates: string[];
};
uncertainty: {
name: string;
alternates: string[];
};
};
Person: {
'@id': string[];
name: {
name: string;
};
};
};
declare const SYNONYMS: SynonymsType;
declare const RSYNONYMS: {
[id: string]: string;
};
export { ArchiveType, ArchiveTypeConstants, ArchiveTypes, Calibration, Change, ChangeLog, ChronData, Compilation, DataTable, Dataset, Funding, Interpretation, InterpretationSeasonality, InterpretationSeasonalityConstants, InterpretationTypes, InterpretationVariable, InterpretationVariableConstants, LiPD, LiPDSeries, Location, LogLevel, Logger, Model, PaleoData, PaleoProxy, PaleoProxyConstants, PaleoProxyGeneral, PaleoProxyGeneralConstants, PaleoUnit, PaleoUnitConstants, PaleoVariable, PaleoVariableConstants, Person, PhysicalSample, ProxyTypes, Publication, RSYNONYMS, Resolution, SCHEMA, SYNONYMS, SynonymCollection, SynonymEntry, SynonymsType, UnitTypes, Variable, VariableTypes };