lcars-dash
Version:
LCARS inspired multi-window dashboard
556 lines (447 loc) • 17.9 kB
JavaScript
/*!
Copyright (c) The Cytoscape Consortium
Permission is hereby granted, free of charge, to any person obtaining a copy of
this software and associated documentation files (the “Software”), to deal in
the Software without restriction, including without limitation the rights to
use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
of the Software, and to permit persons to whom the Software is furnished to do
so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
*/
;(function(){ 'use strict';
// registers the extension on a cytoscape lib ref
var register = function( cytoscape, cola ){
if( !cytoscape || !cola ){ return; } // can't register if cytoscape unspecified
var raf = window.requestAnimationFrame || window.webkitRequestAnimationFrame || window.mozRequestAnimationFrame || window.msRequestAnimationFrame;
var isString = function(o){ return typeof o === typeof ''; };
var isNumber = function(o){ return typeof o === typeof 0; };
var isObject = function(o){ return o != null && typeof o === typeof {}; };
// default layout options
var defaults = {
animate: true, // whether to show the layout as it's running
refresh: 1, // number of ticks per frame; higher is faster but more jerky
maxSimulationTime: 4000, // max length in ms to run the layout
ungrabifyWhileSimulating: false, // so you can't drag nodes during layout
fit: true, // on every layout reposition of nodes, fit the viewport
padding: 30, // padding around the simulation
boundingBox: undefined, // constrain layout bounds; { x1, y1, x2, y2 } or { x1, y1, w, h }
nodeDimensionsIncludeLabels: undefined, // whether labels should be included in determining the space used by a node (default true)
// layout event callbacks
ready: function(){}, // on layoutready
stop: function(){}, // on layoutstop
// positioning options
randomize: false, // use random node positions at beginning of layout
avoidOverlap: true, // if true, prevents overlap of node bounding boxes
handleDisconnected: true, // if true, avoids disconnected components from overlapping
nodeSpacing: function( node ){ return 10; }, // extra spacing around nodes
flow: undefined, // use DAG/tree flow layout if specified, e.g. { axis: 'y', minSeparation: 30 }
alignment: undefined, // relative alignment constraints on nodes, e.g. function( node ){ return { x: 0, y: 1 } }
// different methods of specifying edge length
// each can be a constant numerical value or a function like `function( edge ){ return 2; }`
edgeLength: undefined, // sets edge length directly in simulation
edgeSymDiffLength: undefined, // symmetric diff edge length in simulation
edgeJaccardLength: undefined, // jaccard edge length in simulation
// iterations of cola algorithm; uses default values on undefined
unconstrIter: undefined, // unconstrained initial layout iterations
userConstIter: undefined, // initial layout iterations with user-specified constraints
allConstIter: undefined, // initial layout iterations with all constraints including non-overlap
// infinite layout options
infinite: false // overrides all other options for a forces-all-the-time mode
};
// constructor
// options : object containing layout options
function ColaLayout( options ){
var opts = this.options = {};
for( var i in defaults ){ opts[i] = defaults[i]; }
for( var i in options ){ opts[i] = options[i]; }
}
// runs the layout
ColaLayout.prototype.run = function(){
var layout = this;
var options = this.options;
layout.manuallyStopped = false;
var cy = options.cy; // cy is automatically populated for us in the constructor
var eles = options.eles;
var nodes = eles.nodes();
var edges = eles.edges();
var ready = false;
var bb = options.boundingBox || { x1: 0, y1: 0, w: cy.width(), h: cy.height() };
if( bb.x2 === undefined ){ bb.x2 = bb.x1 + bb.w; }
if( bb.w === undefined ){ bb.w = bb.x2 - bb.x1; }
if( bb.y2 === undefined ){ bb.y2 = bb.y1 + bb.h; }
if( bb.h === undefined ){ bb.h = bb.y2 - bb.y1; }
var typeoffn = typeof function(){};
var getOptVal = function( val, ele ){
if( typeof val === typeoffn ){
var fn = val;
return fn.apply( ele, [ ele ] );
} else {
return val;
}
};
var updateNodePositions = function(){
for( var i = 0; i < nodes.length; i++ ){
var node = nodes[i];
var dimensions = node.layoutDimensions( options );
var scratch = node.scratch('cola');
// update node dims
if( !scratch.updatedDims ){
var padding = getOptVal( options.nodeSpacing, node );
scratch.width = dimensions.w + 2*padding;
scratch.height = dimensions.h + 2*padding;
}
}
nodes.positions(function(node, i){
// Perform 2.x and 1.x backwards compatibility check
if( isNumber(node) ){
node = i;
}
var scratch = node.scratch().cola;
var retPos;
if( !node.grabbed() && !node.isParent() ){
retPos = {
x: bb.x1 + scratch.x,
y: bb.y1 + scratch.y
};
if( !isNumber(retPos.x) || !isNumber(retPos.y) ){
retPos = undefined;
}
}
return retPos;
});
nodes.updateCompoundBounds(); // because the way this layout sets positions is buggy for some reason; ref #878
if( !ready ){
onReady();
ready = true;
}
if( options.fit ){
cy.fit( options.padding );
}
};
var onDone = function(){
if( options.ungrabifyWhileSimulating ){
grabbableNodes.grabify();
}
cy.off('destroy', destroyHandler);
nodes.off('grab free position', grabHandler);
nodes.off('lock unlock', lockHandler);
// trigger layoutstop when the layout stops (e.g. finishes)
layout.one('layoutstop', options.stop);
layout.trigger({ type: 'layoutstop', layout: layout });
};
var onReady = function(){
// trigger layoutready when each node has had its position set at least once
layout.one('layoutready', options.ready);
layout.trigger({ type: 'layoutready', layout: layout });
};
var ticksPerFrame = options.refresh;
var tickSkip = 1; // frames until a tick; used to slow down sim for debugging
if( options.refresh < 0 ){
tickSkip = Math.abs( options.refresh );
ticksPerFrame = 1;
} else {
ticksPerFrame = Math.max( 1, ticksPerFrame ); // at least 1
}
var adaptor = layout.adaptor = cola.adaptor({
trigger: function( e ){ // on sim event
var TICK = cola.EventType ? cola.EventType.tick : null;
var END = cola.EventType ? cola.EventType.end : null;
switch( e.type ){
case 'tick':
case TICK:
if( options.animate ){
updateNodePositions();
}
break;
case 'end':
case END:
updateNodePositions();
if( !options.infinite ){ onDone(); }
break;
}
},
kick: function(){ // kick off the simulation
//var skip = 0;
var inftick = function(){
if( layout.manuallyStopped ){
onDone();
return true;
}
var ret = adaptor.tick();
if( ret && options.infinite ){ // resume layout if done
adaptor.resume(); // resume => new kick
}
return ret; // allow regular finish b/c of new kick
};
var multitick = function(){ // multiple ticks in a row
var ret;
// skip ticks to slow down layout for debugging
// var thisSkip = skip;
// skip = (skip + 1) % tickSkip;
// if( thisSkip !== 0 ){
// return false;
// }
for( var i = 0; i < ticksPerFrame && !ret; i++ ){
ret = ret || inftick(); // pick up true ret vals => sim done
}
return ret;
};
if( options.animate ){
var frame = function(){
if( multitick() ){ return; }
raf( frame );
};
raf( frame );
} else {
while( !inftick() ){}
}
},
on: function( type, listener ){}, // dummy; not needed
drag: function(){} // not needed for our case
});
layout.adaptor = adaptor;
// if set no grabbing during layout
var grabbableNodes = nodes.filter(':grabbable');
if( options.ungrabifyWhileSimulating ){
grabbableNodes.ungrabify();
}
var destroyHandler;
cy.one('destroy', destroyHandler = function(e){
layout.stop();
});
// handle node dragging
var grabHandler;
nodes.on('grab free position', grabHandler = function(e){
var node = this;
var scrCola = node.scratch().cola;
var pos = node.position();
var nodeIsTarget = e.cyTarget === node || e.target === node;
if( !nodeIsTarget ){ return; }
switch( e.type ){
case 'grab':
adaptor.dragstart( scrCola );
adaptor.resume();
break;
case 'free':
adaptor.dragend( scrCola );
break;
case 'position':
// only update when different (i.e. manual .position() call or drag) so we don't loop needlessly
if( scrCola.px !== pos.x - bb.x1 || scrCola.py !== pos.y - bb.y1 ){
scrCola.px = pos.x - bb.x1;
scrCola.py = pos.y - bb.y1;
adaptor.resume();
}
break;
}
});
var lockHandler;
nodes.on('lock unlock', lockHandler = function(e){
var node = this;
var scrCola = node.scratch().cola;
scrCola.fixed = node.locked();
if( node.locked() ){
adaptor.dragstart( scrCola );
} else {
adaptor.dragend( scrCola );
}
});
var nonparentNodes = nodes.stdFilter(function( node ){
return !node.isParent();
});
// add nodes to cola
adaptor.nodes( nonparentNodes.map(function( node, i ){
var padding = getOptVal( options.nodeSpacing, node );
var pos = node.position();
var dimensions = node.layoutDimensions( options );
var struct = node.scratch().cola = {
x: options.randomize || pos.x === undefined ? Math.round( Math.random() * bb.w ) : pos.x,
y: options.randomize || pos.y === undefined ? Math.round( Math.random() * bb.h ) : pos.y,
width: dimensions.w + 2*padding,
height: dimensions.h + 2*padding,
index: i,
fixed: node.locked()
};
return struct;
}) );
if( options.alignment ){ // then set alignment constraints
var offsetsX = [];
var offsetsY = [];
nonparentNodes.forEach(function( node ){
var align = getOptVal( options.alignment, node );
var scrCola = node.scratch().cola;
var index = scrCola.index;
if( !align ){ return; }
if( align.x != null ){
offsetsX.push({
node: index,
offset: align.x
});
}
if( align.y != null ){
offsetsY.push({
node: index,
offset: align.y
});
}
});
// add alignment constraints on nodes
var constraints = [];
if( offsetsX.length > 0 ){
constraints.push({
type: 'alignment',
axis: 'x',
offsets: offsetsX
});
}
if( offsetsY.length > 0 ){
constraints.push({
type: 'alignment',
axis: 'y',
offsets: offsetsY
});
}
adaptor.constraints( constraints );
}
// add compound nodes to cola
adaptor.groups( nodes.stdFilter(function( node ){
return node.isParent();
}).map(function( node, i ){ // add basic group incl leaf nodes
var optPadding = getOptVal( options.nodeSpacing, node );
var getPadding = function(d){
return parseFloat( node.style('padding-'+d) );
};
var pleft = getPadding('left') + optPadding;
var pright = getPadding('right') + optPadding;
var ptop = getPadding('top') + optPadding;
var pbottom = getPadding('bottom') + optPadding;
node.scratch().cola = {
index: i,
padding: Math.max( pleft, pright, ptop, pbottom ),
// leaves should only contain direct descendants (children),
// not the leaves of nested compound nodes or any nodes that are compounds themselves
leaves: node.children().stdFilter(function( child ){
return !child.isParent();
}).map(function( child ){
return child[0].scratch().cola.index;
}),
fixed: node.locked()
};
return node;
}).map(function( node ){ // add subgroups
node.scratch().cola.groups = node.children().stdFilter(function( child ){
return child.isParent();
}).map(function( child ){
return child.scratch().cola.index;
});
return node.scratch().cola;
}) );
// get the edge length setting mechanism
var length;
var lengthFnName;
if( options.edgeLength != null ){
length = options.edgeLength;
lengthFnName = 'linkDistance';
} else if( options.edgeSymDiffLength != null ){
length = options.edgeSymDiffLength;
lengthFnName = 'symmetricDiffLinkLengths';
} else if( options.edgeJaccardLength != null ){
length = options.edgeJaccardLength;
lengthFnName = 'jaccardLinkLengths';
} else {
length = 100;
lengthFnName = 'linkDistance';
}
var lengthGetter = function( link ){
return link.calcLength;
};
// add the edges to cola
adaptor.links( edges.stdFilter(function( edge ){
return !edge.source().isParent() && !edge.target().isParent();
}).map(function( edge, i ){
var c = edge.scratch().cola = {
source: edge.source()[0].scratch().cola.index,
target: edge.target()[0].scratch().cola.index
};
if( length != null ){
c.calcLength = getOptVal( length, edge );
}
return c;
}) );
adaptor.size([ bb.w, bb.h ]);
if( length != null ){
adaptor[ lengthFnName ]( lengthGetter );
}
// set the flow of cola
if( options.flow ){
var flow;
var defAxis = 'y';
var defMinSep = 50;
if( isString(options.flow) ){
flow = {
axis: options.flow,
minSeparation: defMinSep
};
} else if( isNumber(options.flow) ){
flow = {
axis: defAxis,
minSeparation: options.flow
};
} else if( isObject(options.flow) ){
flow = options.flow;
flow.axis = flow.axis || defAxis;
flow.minSeparation = flow.minSeparation != null ? flow.minSeparation : defMinSep;
} else { // e.g. options.flow: true
flow = {
axis: defAxis,
minSeparation: defMinSep
};
}
adaptor.flowLayout( flow.axis , flow.minSeparation );
}
layout.trigger({ type: 'layoutstart', layout: layout });
adaptor
.avoidOverlaps( options.avoidOverlap )
.handleDisconnected( options.handleDisconnected )
.start( options.unconstrIter, options.userConstIter, options.allConstIter)
;
if( !options.infinite ){
setTimeout(function(){
if( !layout.manuallyStopped ){
adaptor.stop();
}
}, options.maxSimulationTime);
}
return this; // chaining
};
// called on continuous layouts to stop them before they finish
ColaLayout.prototype.stop = function(){
if( this.adaptor ){
this.manuallyStopped = true;
this.adaptor.stop();
}
return this; // chaining
};
cytoscape('layout', 'cola', ColaLayout);
};
if( typeof module !== 'undefined' && module.exports ){ // expose as a commonjs module
module.exports = function( cytoscape, cola ){
register( cytoscape, cola || require('webcola') );
};
} else if( typeof define !== 'undefined' && define.amd ){ // expose as an amd/requirejs module
define('cytoscape-cola', function(){
return register;
});
}
if( typeof cytoscape !== 'undefined' && typeof cola !== 'undefined' ){ // expose to global cytoscape (i.e. window.cytoscape)
register( cytoscape, cola );
}
})();