ideogram
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Chromosome visualization for the web
32 lines (30 loc) • 1.13 kB
HTML
<html>
<head>
<title>Custom organism | Ideogram</title>
<style>
body {font: 14px Arial; line-height: 19.6px; padding: 0 15px;}
a, a:visited {text-decoration: none;}
a:hover {text-decoration: underline;}
a, a:hover, a:visited, a:active {color: #0366d6;}
</style>
<script type="text/javascript" src="../../dist/js/ideogram.min.js"></script>
<link rel="icon" type="image/x-icon" href="img/ideogram_favicon.ico">
</head>
<body>
<h1>Custom organism | Ideogram</h1>
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<a href="https://github.com/eweitz/ideogram/blob/gh-pages/custom.html" target="_blank">Source</a>
<p>
A custom genome is depicted below. This example shows how you can fetch chromosome data via API and plot it with Ideogram.</a>.
</p>
<script type="text/javascript">
var ideogram = new Ideogram({
organism: 'customjsonnoextension',
dataDir: 'https://raw.githubusercontent.com/eweitz/ideogram/aff3866b022b55e76b8ad7d45ba216361019a186/data/bands/native/'
});
</script>
</body>
</html>