UNPKG

ideogram

Version:

Chromosome visualization for the web

395 lines (394 loc) 16.9 kB
#chromosome arm band iscn_start iscn_stop bp_start bp_stop stain density 1 p 36.3 0 451 1 7100000 gneg 1 p 36.2 451 682 7100000 16100000 gpos 100 1 p 36.1 682 1259 16100000 27800000 gneg 1 p 35 1259 1583 27800000 34400000 gpos 100 1 p 34.3 1583 1779 34400000 39600000 gneg 1 p 34.2 1779 1999 39600000 43900000 gpos 25 1 p 34.1 1999 2184 43900000 46500000 gneg 1 p 33 2184 2519 46500000 51300000 gpos 75 1 p 32 2519 3050 51300000 60900000 gneg 1 p 31 3050 4598 60900000 84700000 gpos 100 1 p 22 4598 5430 84700000 94500000 gneg 1 p 21 5430 6274 94500000 107000000 gpos 100 1 p 13 6274 7094 107000000 117600000 gneg 1 p 12 7094 7279 117600000 120700000 gpos 50 1 p 11 7279 7394 120700000 124300000 acen 1 q 11 7394 7554 124300000 128000000 acen 1 q 12 7554 8672 128000000 142400000 gvar 1 q 21 8672 9350 142400000 153300000 gneg 1 q 22 9350 9685 153300000 154800000 gpos 50 1 q 23 9685 10160 154800000 163800000 gneg 1 q 24 10160 10565 163800000 171200000 gpos 100 1 q 25 10565 11005 171200000 184000000 gneg 1 q 31 11005 12207 184000000 197500000 gpos 100 1 q 32 12207 13272 197500000 212100000 gneg 1 q 41 13272 13920 212100000 222100000 gpos 100 1 q 42 13920 14406 222100000 234600000 gneg 1 q 43 14406 14776 234600000 241700000 gpos 75 1 q 44 14776 15100 241700000 247249719 gneg 10 p 15 0 456 1 6700000 gneg 10 p 14 456 841 6700000 12300000 gpos 75 10 p 13 841 1261 12300000 17300000 gneg 10 p 12 1261 1923 17300000 28300000 gpos 100 10 p 11.2 1923 2477 28300000 38800000 gneg 10 p 11.1 2477 2620 38800000 40300000 acen 10 q 11.1 2620 2762 40300000 42100000 acen 10 q 11.2 2762 3222 42100000 53300000 gneg 10 q 21 3222 4442 53300000 71300000 gpos 100 10 q 22 4442 5388 71300000 82000000 gneg 10 q 23 5388 6096 82000000 98000000 gpos 100 10 q 24 6096 6644 98000000 105700000 gneg 10 q 25 6644 7351 105700000 119100000 gpos 100 10 q 26 7351 8050 119100000 135374737 gneg 11 p 15 0 1149 1 21600000 gneg 11 p 14 1149 1957 21600000 31000000 gpos 100 11 p 13 1957 2262 31000000 36400000 gneg 11 p 12 2262 2639 36400000 43400000 gpos 100 11 p 11.2 2639 3186 43400000 48800000 gneg 11 p 11.1 3186 3348 48800000 52900000 acen 11 q 11 3348 3478 52900000 56400000 acen 11 q 12 3478 3999 56400000 63100000 gpos 100 11 q 13 3999 4842 63100000 76700000 gneg 11 q 14 4842 5599 76700000 92300000 gpos 100 11 q 21 5599 5703 92300000 96700000 gneg 11 q 22 5703 6363 96700000 110000000 gpos 100 11 q 23 6363 7311 110000000 120700000 gneg 11 q 24 7311 7658 120700000 130300000 gpos 100 11 q 25 7658 7980 130300000 134452384 gneg 12 p 13 0 760 1 14800000 gneg 12 p 12 760 1492 14800000 26300000 gpos 100 12 p 11.2 1492 1922 26300000 33200000 gneg 12 p 11.1 1922 2105 33200000 35400000 acen 12 q 11 2105 2202 35400000 36500000 acen 12 q 12 2202 2697 36500000 44600000 gpos 100 12 q 13 2697 3430 44600000 56300000 gneg 12 q 14 3430 3942 56300000 66000000 gpos 100 12 q 15 3942 4286 66000000 69800000 gneg 12 q 21 4286 5293 69800000 91200000 gpos 100 12 q 22 5293 5716 91200000 94800000 gneg 12 q 23 5716 6229 94800000 107500000 gpos 100 12 q 24.1 6229 6714 107500000 112800000 gneg 12 q 24.2 6714 6917 112800000 119100000 gpos 100 12 q 24.3 6917 7500 119100000 132349534 gneg 13 p 13 0 301 1 3800000 gvar 13 p 12 301 602 3800000 8300000 stalk 13 p 11.2 602 1004 8300000 13500000 gvar 13 p 11.1 1004 1204 13500000 16000000 acen 13 q 11 1204 1351 16000000 18400000 acen 13 q 12 1351 2019 18400000 31100000 gneg 13 q 13 2019 2295 31100000 39500000 gpos 100 13 q 14 2295 3028 39500000 52200000 gneg 13 q 21 3028 4093 52200000 72100000 gpos 100 13 q 22 4093 4625 72100000 77800000 gneg 13 q 31 4625 5280 77800000 93800000 gpos 100 13 q 32 5280 5742 93800000 100500000 gneg 13 q 33 5742 6065 100500000 109100000 gpos 100 13 q 34 6065 6510 109100000 114142980 gneg 14 p 13 0 305 1 3100000 gvar 14 p 12 305 611 3100000 6700000 stalk 14 p 11.2 611 1018 6700000 13600000 gvar 14 p 11.1 1018 1222 13600000 15600000 acen 14 q 11.1 1222 1421 15600000 19100000 acen 14 q 11.2 1421 1808 19100000 23600000 gneg 14 q 12 1808 2243 23600000 31800000 gpos 100 14 q 13 2243 2633 31800000 36900000 gneg 14 q 21 2633 3441 36900000 48300000 gpos 100 14 q 22 3441 3894 48300000 55800000 gneg 14 q 23 3894 4169 55800000 67000000 gpos 100 14 q 24 4169 5084 67000000 78400000 gneg 14 q 31 5084 5599 78400000 88900000 gpos 100 14 q 32 5599 6300 88900000 106368585 gneg 15 p 13 0 319 1 3500000 gvar 15 p 12 319 637 3500000 7900000 stalk 15 p 11.2 637 1062 7900000 14100000 gvar 15 p 11.1 1062 1275 14100000 17000000 acen 15 q 11.1 1275 1498 17000000 18400000 acen 15 q 11.2 1498 1657 18400000 23300000 gneg 15 q 12 1657 1862 23300000 25700000 gpos 50 15 q 13 1862 2043 25700000 31400000 gneg 15 q 14 2043 2411 31400000 37900000 gpos 75 15 q 15 2411 2832 37900000 42700000 gneg 15 q 21 2832 3600 42700000 55800000 gpos 100 15 q 22 3600 4203 55800000 65300000 gneg 15 q 23 4203 4471 65300000 70400000 gpos 25 15 q 24 4471 5002 70400000 76100000 gneg 15 q 25 5002 5381 76100000 86900000 gpos 100 15 q 26 5381 6070 86900000 100338915 gneg 16 p 13.3 0 410 1 6300000 gneg 16 p 13.2 410 638 6300000 10300000 gpos 50 16 p 13.1 638 1012 10300000 16700000 gneg 16 p 12 1012 1522 16700000 27600000 gpos 100 16 p 11.2 1522 2060 27600000 34400000 gneg 16 p 11.1 2060 2187 34400000 38200000 acen 16 q 11.1 2187 2310 38200000 40700000 acen 16 q 11.2 2310 2811 40700000 45500000 gvar 16 q 12.1 2811 2969 45500000 51200000 gneg 16 q 12.2 2969 3118 51200000 54500000 gpos 50 16 q 13 3118 3364 54500000 56700000 gneg 16 q 21 3364 3750 56700000 65200000 gpos 100 16 q 22 3750 4189 65200000 73300000 gneg 16 q 23 4189 4655 73300000 82700000 gpos 100 16 q 24 4655 5120 82700000 88827254 gneg 17 p 13 0 602 1 11200000 gneg 17 p 12 602 1051 11200000 15900000 gpos 75 17 p 11.2 1051 1492 15900000 22100000 gneg 17 p 11.1 1492 1618 22100000 22200000 acen 17 q 11.1 1618 1762 22200000 23200000 acen 17 q 11.2 1762 2050 23200000 28800000 gneg 17 q 12 2050 2383 28800000 35400000 gpos 50 17 q 21 2383 3149 35400000 47600000 gneg 17 q 22 3149 3680 47600000 54900000 gpos 75 17 q 23 3680 3950 54900000 59900000 gneg 17 q 24 3950 4441 59900000 68400000 gpos 100 17 q 25 4441 4950 68400000 78774742 gneg 18 p 11.3 0 623 1 7200000 gpos 100 18 p 11.2 623 1190 7200000 15400000 gneg 18 p 11.1 1190 1301 15400000 16100000 acen 18 q 11.1 1301 1433 16100000 17300000 acen 18 q 11.2 1433 1862 17300000 23300000 gneg 18 q 12 1862 2721 23300000 41800000 gpos 100 18 q 21 2721 3449 41800000 59800000 gneg 18 q 22 3449 4229 59800000 71300000 gpos 100 18 q 23 4229 4650 71300000 76117153 gneg 19 p 13.3 0 668 1 6900000 gneg 19 p 13.2 668 1069 6900000 12600000 gpos 25 19 p 13.1 1069 1461 12600000 19800000 gneg 19 p 12 1461 1746 19800000 26700000 gvar 19 p 11 1746 1880 26700000 28500000 acen 19 q 11 1880 2019 28500000 30200000 acen 19 q 12 2019 2342 30200000 37100000 gvar 19 q 13.1 2342 2943 37100000 43400000 gneg 19 q 13.2 2943 3344 43400000 47800000 gpos 100 19 q 13.3 3344 3710 47800000 57600000 gneg 19 q 13.4 3710 4120 57600000 63811651 gpos 100 2 p 25 0 475 1 12800000 gneg 2 p 24 475 931 12800000 23900000 gpos 100 2 p 23 931 1558 23900000 31900000 gneg 2 p 22 1558 2145 31900000 41600000 gpos 100 2 p 21 2145 2650 41600000 47600000 gneg 2 p 16 2650 3439 47600000 61100000 gpos 100 2 p 15 3439 3682 61100000 64000000 gneg 2 p 14 3682 3976 64000000 70500000 gpos 50 2 p 13 3976 4572 70500000 75400000 gneg 2 p 12 4572 5068 75400000 83700000 gpos 100 2 p 11.2 5068 5534 83700000 91000000 gneg 2 p 11.1 5534 5665 91000000 93300000 acen 2 q 11.1 5665 5828 93300000 95700000 acen 2 q 11.2 5828 6181 95700000 102100000 gneg 2 q 12 6181 6602 102100000 108600000 gpos 100 2 q 13 6602 6928 108600000 113800000 gneg 2 q 14.1 6928 7254 113800000 118600000 gpos 50 2 q 14.2 7254 7336 118600000 122100000 gneg 2 q 14.3 7336 7662 122100000 129600000 gpos 50 2 q 21 7662 8314 129600000 136600000 gneg 2 q 22 8314 9048 136600000 148400000 gpos 100 2 q 23 9048 9374 148400000 154600000 gneg 2 q 24 9374 10202 154600000 169500000 gpos 100 2 q 31 10202 10854 169500000 182700000 gneg 2 q 32 10854 11792 182700000 197100000 gpos 100 2 q 33 11792 12362 197100000 209100000 gneg 2 q 34 12362 12811 209100000 215100000 gpos 100 2 q 35 12811 13164 215100000 221300000 gneg 2 q 36 13164 13653 221300000 230700000 gpos 100 2 q 37 13653 14400 230700000 242951149 gneg 20 p 13 0 471 1 5000000 gneg 20 p 12 471 1005 5000000 17800000 gpos 100 20 p 11.2 1005 1593 17800000 25700000 gneg 20 p 11.1 1593 1729 25700000 27100000 acen 20 q 11.1 1729 1870 27100000 28400000 acen 20 q 11.2 1870 2362 28400000 37100000 gneg 20 q 12 2362 2732 37100000 41100000 gpos 75 20 q 13.1 2732 3075 41100000 49200000 gneg 20 q 13.2 3075 3409 49200000 54400000 gpos 75 20 q 13.3 3409 3770 54400000 62435964 gneg 21 p 13 0 301 1 2900000 gvar 21 p 12 301 601 2900000 6300000 stalk 21 p 11.2 601 1002 6300000 10000000 gvar 21 p 11.1 1002 1203 10000000 12300000 acen 21 q 11.1 1203 1341 12300000 13200000 acen 21 q 11.2 1341 1514 13200000 15300000 gneg 21 q 21 1514 2204 15300000 30500000 gpos 100 21 q 22 2204 3200 30500000 46944323 gneg 22 p 13 0 308 1 3000000 gvar 22 p 12 308 604 3000000 6600000 stalk 22 p 11.2 604 1093 6600000 9600000 gvar 22 p 11.1 1093 1232 9600000 11800000 acen 22 q 11.1 1232 1371 11800000 16300000 acen 22 q 11.2 1371 1887 16300000 24300000 gneg 22 q 12 1887 2287 24300000 35900000 gpos 100 22 q 13 2287 3400 35900000 49691432 gneg 3 p 26 0 257 1 8700000 gpos 100 3 p 25 257 649 8700000 14700000 gneg 3 p 24 649 1355 14700000 30800000 gpos 100 3 p 23 1355 1574 30800000 32100000 gneg 3 p 22 1574 1966 32100000 43600000 gpos 100 3 p 21 1966 3302 43600000 54400000 gneg 3 p 14 3302 4103 54400000 71800000 gpos 100 3 p 13 4103 4456 71800000 74200000 gneg 3 p 12 4456 5439 74200000 87200000 gpos 100 3 p 11 5439 5573 87200000 91700000 acen 3 q 11.1 5573 5733 91700000 93200000 acen 3 q 11.2 5733 6034 93200000 99800000 gvar 3 q 12 6034 6175 99800000 104400000 gneg 3 q 13.1 6175 6665 104400000 112800000 gpos 100 3 q 13.2 6665 6806 112800000 115000000 gneg 3 q 13.3 6806 7389 115000000 123400000 gpos 100 3 q 21 7389 7926 123400000 131500000 gneg 3 q 22 7926 8255 131500000 140400000 gpos 100 3 q 23 8255 8538 140400000 144400000 gneg 3 q 24 8538 9206 144400000 150400000 gpos 100 3 q 25 9206 9639 150400000 161200000 gneg 3 q 26.1 9639 10147 161200000 169200000 gpos 100 3 q 26.2 10147 10269 169200000 172500000 gneg 3 q 26.3 10269 10702 172500000 184200000 gpos 100 3 q 27 10702 11022 184200000 189400000 gneg 3 q 28 11022 11352 189400000 193800000 gpos 75 3 q 29 11352 11700 193800000 199501827 gneg 4 p 16 0 843 1 10900000 gneg 4 p 15.3 843 1330 10900000 23100000 gpos 100 4 p 15.2 1330 1449 23100000 27900000 gneg 4 p 15.1 1449 1857 27900000 35500000 gpos 100 4 p 14 1857 2292 35500000 40900000 gneg 4 p 13 2292 2647 40900000 45600000 gpos 50 4 p 12 2647 2950 45600000 48700000 gneg 4 p 11 2950 3095 48700000 50700000 acen 4 q 11 3095 3211 50700000 52400000 acen 4 q 12 3211 3649 52400000 59200000 gneg 4 q 13 3649 4422 59200000 76500000 gpos 100 4 q 21 4422 5169 76500000 88200000 gneg 4 q 22 5169 5735 88200000 99100000 gpos 100 4 q 23 5735 5838 99100000 102500000 gneg 4 q 24 5838 6353 102500000 107900000 gpos 50 4 q 25 6353 6560 107900000 114100000 gneg 4 q 26 6560 7294 114100000 120600000 gpos 75 4 q 27 7294 7577 120600000 124000000 gneg 4 q 28 7577 8440 124000000 139500000 gpos 100 4 q 31.1 8440 8813 139500000 141700000 gneg 4 q 31.2 8813 9071 141700000 151000000 gpos 100 4 q 31.3 9071 9431 151000000 155100000 gneg 4 q 32 9431 10050 155100000 170400000 gpos 100 4 q 33 10050 10281 170400000 172200000 gneg 4 q 34 10281 10732 172200000 182600000 gpos 100 4 q 35 10732 11170 182600000 191273063 gneg 5 p 15.3 0 574 1 8200000 gneg 5 p 15.2 574 815 8200000 15100000 gpos 50 5 p 15.1 815 1028 15100000 18500000 gneg 5 p 14 1028 1897 18500000 29300000 gpos 100 5 p 13 1897 2444 29300000 42400000 gneg 5 p 12 2444 2712 42400000 45800000 gpos 50 5 p 11 2712 2845 45800000 47700000 acen 5 q 11.1 2845 2990 47700000 50500000 acen 5 q 11.2 2990 3518 50500000 58900000 gneg 5 q 12 3518 3966 58900000 66500000 gpos 100 5 q 13 3966 4691 66500000 76400000 gneg 5 q 14 4691 5496 76400000 91900000 gpos 100 5 q 15 5496 5747 91900000 97300000 gneg 5 q 21 5747 6577 97300000 109600000 gpos 100 5 q 22 6577 6802 109600000 115200000 gneg 5 q 23 6802 7751 115200000 130400000 gpos 100 5 q 31 7751 8740 130400000 143100000 gneg 5 q 32 8740 9189 143100000 147200000 gpos 75 5 q 33 9189 9558 147200000 159900000 gneg 5 q 34 9558 10138 159900000 167400000 gpos 100 5 q 35 10138 10600 167400000 180857866 gneg 6 p 25 0 405 1 7000000 gneg 6 p 24 405 643 7000000 13500000 gpos 100 6 p 23 643 1047 13500000 15500000 gneg 6 p 22 1047 1773 15500000 29900000 gpos 100 6 p 21.3 1773 2428 29900000 36800000 gneg 6 p 21.2 2428 2571 36800000 40600000 gpos 25 6 p 21.1 2571 2999 40600000 45200000 gneg 6 p 12 2999 3618 45200000 57200000 gpos 100 6 p 11.2 3618 3714 57200000 58400000 gneg 6 p 11.1 3714 3856 58400000 60500000 acen 6 q 11 3856 3999 60500000 63500000 acen 6 q 12 3999 4439 63500000 70000000 gpos 100 6 q 13 4439 4701 70000000 75900000 gneg 6 q 14 4701 5129 75900000 87500000 gpos 100 6 q 15 5129 5402 87500000 92100000 gneg 6 q 16 5402 6068 92100000 104800000 gpos 100 6 q 21 6068 6746 104800000 113900000 gneg 6 q 22 6746 7793 113900000 130400000 gpos 100 6 q 23 7793 8221 130400000 139100000 gneg 6 q 24 8221 8851 139100000 149100000 gpos 100 6 q 25 8851 9386 149100000 160900000 gneg 6 q 26 9386 9696 160900000 164400000 gpos 50 6 q 27 9696 10100 164400000 170899992 gneg 7 p 22 0 470 1 7200000 gneg 7 p 21 470 1300 7200000 19500000 gpos 100 7 p 15 1300 1894 19500000 31800000 gneg 7 p 14 1894 2339 31800000 43300000 gpos 100 7 p 13 2339 2698 43300000 46600000 gneg 7 p 12 2698 3069 46600000 53900000 gpos 100 7 p 11.2 3069 3267 53900000 57400000 gneg 7 p 11.1 3267 3391 57400000 59100000 acen 7 q 11.1 3391 3513 59100000 61100000 acen 7 q 11.2 3513 4605 61100000 77400000 gneg 7 q 21 4605 5612 77400000 97900000 gpos 100 7 q 22 5612 6292 97900000 107200000 gneg 7 q 31 6292 7517 107200000 126900000 gpos 100 7 q 32 7517 7966 126900000 132400000 gneg 7 q 33 7966 8221 132400000 137300000 gpos 50 7 q 34 8221 8440 137300000 142800000 gneg 7 q 35 8440 8719 142800000 147500000 gpos 75 7 q 36 8719 9350 147500000 158821424 gneg 8 p 23 0 610 1 12700000 gneg 8 p 22 610 1138 12700000 19100000 gpos 100 8 p 21 1138 1656 19100000 29700000 gneg 8 p 12 1656 2266 29700000 38500000 gpos 75 8 p 11.2 2266 2611 38500000 43200000 gneg 8 p 11.1 2611 2743 43200000 45200000 acen 8 q 11.1 2743 2891 45200000 48100000 acen 8 q 11.2 2891 3148 48100000 55600000 gneg 8 q 12 3148 3641 55600000 66100000 gpos 100 8 q 13 3641 4145 66100000 74000000 gneg 8 q 21.1 4145 4756 74000000 84900000 gpos 100 8 q 21.2 4756 4885 84900000 87200000 gneg 8 q 21.3 4885 5506 87200000 93500000 gpos 100 8 q 22 5506 6276 93500000 106100000 gneg 8 q 23 6276 7026 106100000 117700000 gpos 100 8 q 24.1 7026 7628 117700000 127300000 gneg 8 q 24.2 7628 7885 127300000 140000000 gpos 100 8 q 24.3 7885 8250 140000000 146274826 gneg 9 p 24 0 355 1 9000000 gneg 9 p 23 355 841 9000000 14100000 gpos 75 9 p 22 841 942 14100000 19900000 gneg 9 p 21 942 1661 19900000 32800000 gpos 100 9 p 13 1661 2148 32800000 40200000 gneg 9 p 12 2148 2522 40200000 42400000 gpos 50 9 p 11 2522 2634 42400000 51800000 acen 9 q 11 2634 2773 51800000 60300000 acen 9 q 12 2773 3695 60300000 70000000 gvar 9 q 13 3695 3864 70000000 70500000 gneg 9 q 21 3864 4865 70500000 89600000 gpos 100 9 q 22 4865 5857 89600000 101600000 gneg 9 q 31 5857 6373 101600000 113900000 gpos 100 9 q 32 6373 6571 113900000 116700000 gneg 9 q 33 6571 6958 116700000 129300000 gpos 100 9 q 34 6958 7950 129300000 140273252 gneg X p 22.3 0 428 1 9500000 gneg X p 22.2 428 642 9500000 17100000 gpos 100 X p 22.1 642 1131 17100000 24900000 gneg X p 21 1131 1977 24900000 37500000 gpos 100 X p 11.4 1977 2252 37500000 42300000 gneg X p 11.3 2252 2446 42300000 47300000 gpos 75 X p 11.2 2446 3108 47300000 56600000 gneg X p 11.1 3108 3241 56600000 59500000 acen X q 11 3241 3341 59500000 65100000 acen X q 12 3341 3672 65100000 67700000 gpos 50 X q 13 3672 4405 67700000 76000000 gneg X q 21 4405 5559 76000000 98200000 gpos 100 X q 22 5559 5951 98200000 110500000 gneg X q 23 5951 6352 110500000 116800000 gpos 75 X q 24 6352 6653 116800000 120700000 gneg X q 25 6653 7195 120700000 129800000 gpos 100 X q 26 7195 7647 129800000 137800000 gneg X q 27 7647 8168 137800000 146900000 gpos 100 X q 28 8168 8610 146900000 154913754 gneg Y p 11.3 0 286 1 3300000 gpos 100 Y p 11.2 286 751 3300000 11200000 gneg Y p 11.1 751 883 11200000 11300000 acen Y q 11.1 883 1002 11300000 12500000 acen Y q 11.2 1002 2169 12500000 27200000 gneg Y q 12 2169 3650 27200000 57772954 gvar