ideogram/src/js/assembly-manifest.js

Chromosome visualization with D3.js

assemblyManifest = {   'anopheles-gambiae': ['GCA_000005575.1', 'anopheles_gambiae_core_37_90_4'],
    'aspergillus-fumigatus': [   'GCA_000002655.1',
                                 'aspergillus_fumigatus_core_37_90_2'],
    'aspergillus-nidulans': [   'GCA_000011425.1',
                                'aspergillus_nidulans_core_37_90_6'],
    'aspergillus-niger': ['GCA_000002855.1', 'aspergillus_niger_core_31_84_1'],
    'aspergillus-oryzae': [   'GCA_000184455.1',
                              'aspergillus_oryzae_core_31_84_2'],
    'chlorocebus-sabaeus': ['GCF_000409795.2', 'Chlorocebus_sabeus 1.1'],
    'ciona-intestinalis': ['GCF_000224145.2', 'KH'],
    'drosophila-melanogaster': [   'GCA_000001215.4',
                                   'drosophila_melanogaster_core_37_90_6'],
    'felis-catus': ['GCF_000181335.2', 'Felis_catus_8.0'],
    'gorilla-gorilla': ['GCF_000151905.2', 'gorGor4'],
    'homo-sapiens': ['GCF_000306695.2', 'CHM1_1.1'],
    'hordeum-vulgare': ['GCA_000326085.1', 'hordeum_vulgare_core_35_88_2'],
    'macaca-fascicularis': ['GCF_000364345.1', 'Macaca_fascicularis_5.0'],
    'macaca-mulatta': ['GCF_000772875.2', 'Mmul_8.0.1'],
    'mus-musculus': ['GCF_000001635.26', 'GRCm38.p6'],
    'nomascus-leucogenys': ['GCF_000146795.2', 'Nleu_3.0'],
    'ornithorhynchus-anatinus': [   'GCF_000002275.2',
                                    'Ornithorhynchus_anatinus-5.0.1'],
    'oryza-sativa': ['GCA_001433935.1', 'oryza_sativa_core_37_90_7'],
    'pan-paniscus': ['GCF_000258655.2', 'panpan1.1'],
    'pan-troglodytes': ['GCF_000001515.7', 'Pan_tro 3.0'],
    'pongo-abelii': ['GCF_000001545.4', 'P_pygmaeus_2.0.2'],
    'xenopus-laevis': ['taeGut2', ''],
    'zea-mays': ['GCA_000005005.5', 'zea_mays_core_31_84_6']}