ibowankenobi-i-pv
Version:
Interactive Protein Sequence VIsualization/Viewer - Interactive Circos
163 lines (141 loc) • 3.85 kB
Plain Text
# RGB color definition. Colors are refered to within configuration files
# by their name. In order to use a color, you must define it here.
#
# Common colors (red, green, blue, etc) are already defined in 7
# tones, based on 7 color Brewer palettes, where available.
#
# vvlHUE (very very light HUE, e.g. vvlred)
# vlHUE (very light HUE, e.g. vlred)
# lHUE (light HUE, e.g. red)
# HUE (e.g. red)
# dHUE (dark HUE, e.g. dred)
# vdHUE (very dark HUE, e.g. vdred))
# vvdHUE (very very dark HUE, e.g. vvdred))
#
# Pure colors are prefixed with "p" (e.g. pred, dpred, vdpred) and
# are based on 10% luminance steps from a pure hue color. Use these
# at your discretion.
#
# Boutique colors are not. If you really must use 'bisque', then add
#
# bisque = 255,228,196
#
# See colors.unixnames.txt for a large number of named color definitions.
#
# In addition to hues, two other color groups are defined.
#
# - cytogenetic band colors (e.g. gposNNN, acen, stalk, etc.) which
# correspond to colors on ideogram bands
# - UCSC chromosome color palette (e.g. chrNN, chrUn, chrNA)
# - included from ucsc.conf
#
# Another useful list of colors is in brewer.conf, which defines
# Brewer Palettes (www.colorbrewer.org), and corresponding lists.
#
#
#
white = 255,255,255
vvvvlgrey = greys-9-seq-1
vvvlgrey = greys-9-seq-1
vvlgrey = greys-9-seq-2
vlgrey = greys-9-seq-3
lgrey = greys-9-seq-4
grey = greys-9-seq-5
dgrey = greys-9-seq-6
vdgrey = greys-9-seq-7
vvdgrey = greys-9-seq-8
vvvdgrey = greys-9-seq-9
vvvvdgrey = greys-9-seq-9
black = 0,0,0
transparent = 0,0,1
vvlred = reds-7-seq-1
vlred = reds-7-seq-2
lred = reds-7-seq-3
red = reds-7-seq-4
dred = reds-7-seq-5
vdred = reds-7-seq-6
vvdred = reds-7-seq-7
vvlpred = 255,82,82
vlpred = 255,63,63
lpred = 255,41,41
pred = 255,0,0
dpred = 237,0,0
vdpred = 219,0,0
vvdpred = 201,0,0
vvlgreen = greens-7-seq-1
vlgreen = greens-7-seq-2
lgreen = greens-7-seq-3
green = greens-7-seq-4
dgreen = greens-7-seq-5
vdgreen = greens-7-seq-6
vvdgreen = greens-7-seq-7
vvlpgreen = 145,255,145
vlpgreen = 112,255,112
lpgreen = 75,255,75
pgreen = 0,255,0
dpgreen = 0,229,0
vdpgreen = 0,204,0
vvdpgreen = 0,180,0
vvlblue = blues-7-seq-1
vlblue = blues-7-seq-2
lblue = blues-7-seq-3
blue = blues-7-seq-4
dblue = blues-7-seq-5
vdblue = blues-7-seq-6
vvdblue = blues-7-seq-7
vvlpblue = 120,224,250
vlpblue = 95,206,255
lpblue = 64,188,255
pblue = 0,170,255
dpblue = 0,153,237
vdpblue = 0,136,220
vvdpblue = 0,120,204
vvlpurple = purples-7-seq-1
vlpurple = purples-7-seq-2
lpurple = purples-7-seq-3
purple = purples-7-seq-4
dpurple = purples-7-seq-5
vdpurple = purples-7-seq-6
vvdpurple = purples-7-seq-7
vvlppurple = 166,158,255
vlppurple = 151,143,255
lppurple = 136,128,255
ppurple = 122,112,255
dppurple = 107,97,243
vdppurple = 92,80,232
vvdppurple = 77,62,224
vvlorange = oranges-7-seq-1
vlorange = oranges-7-seq-2
lorange = oranges-7-seq-3
orange = oranges-7-seq-4
dorange = oranges-7-seq-5
vdorange = oranges-7-seq-6
vvdorange = oranges-7-seq-7
vvlporange = 255,182,106
vlporange = 255,164,82
lporange = 255,146,54
porange = 255,127,0
dporange = 234,110,0
vdporange = 213,92,0
vvdporange = 193,75,0
# there is no sequential yellow Brewer palette - use CMYK ladder
vvlyellow = 255,252,213
vlyellow = 255,249,174
lyellow = 255,246,133
yellow = 255,244,80
dyellow = 255,242,0
vdyellow = 227,210,0
vvdyellow = 193,180,0
vvlpyellow = vvlyellow
vlpyellow = vlyellow
lpyellow = lyellow
pyellow = yellow
dpyellow = dyellow
vdpyellow = vdyellow
vvdpyellow = vvdyellow
# Brewer palette
<<include colors.brewer.conf>>
# chromosome color map (UCSC)
<<include colors.ucsc.conf>>
# HSV pure colors
<<include colors.hsv.conf>>