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ibowankenobi-i-pv

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Interactive Protein Sequence VIsualization/Viewer - Interactive Circos

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show_ticks = yes show_tick_labels = yes show_grid = yes <ticks> tick_label_font = light radius = dims(ideogram,radius_outer) + 180p label_offset = 5p label_size = 16p multiplier = 1e-6 color = black thickness = 1p # 25 Mb ticks, all chromosomes, with labels <tick> spacing = 25u size = 12p show_label = yes format = %d </tick> # 5 Mb ticks, all chromosomes, with labels # labels must be separated by at least 1px, which # avoids overlap on human chrs <tick> label_separation = 1p spacing = 5u size = 7p show_label = yes format = %d </tick> # 5 Mb ticks with grid on rn1 and mm1, drawn only # for their grid (note size=0p) <tick> chromosomes_display_default = no chromosomes = rn1;mm1 spacing = 5u size = 0p force_display = yes grid_start = 0.45r grid_end = dims(ideogram,radius_outer) + 180p grid_color = grey grid_thickness = 1p grid = yes </tick> # 20% relative ticks on human chromosomes <tick> chromosomes = -rn1;-mm1 radius = 0.95r spacing_type = relative rspacing = 0.20 size = 6p show_label = yes label_relative = yes rmultiplier = 100 format = %d suffix = % skip_last_label= yes grid_start = 0.885r grid_end = 0.95r grid_color = grey grid_thickness = 1p grid = yes </tick> # relative ticks at start and end of human chromosomes # with grid <tick> spacing_type = relative rspacing = 1 size = 6p grid_start = 0.45r grid_end = dims(ideogram,radius_outer) + 180p grid_color = grey grid_thickness = 1p grid = yes </tick> <tick> chromosomes = -rn1;-mm1 radius = 0.95r spacing_type = relative rspacing = 0.10 size = 3p show_label = no grid_start = 0.885r grid_end = 0.95r grid_color = lgrey grid_thickness = 1p grid = yes </tick> # 25% relative ticks on human chromosomes <tick> chromosomes = -rn1;-mm1 radius = 0.82r spacing_type = relative rspacing = 0.25 size = 6p show_label = yes label_relative = yes rmultiplier = 100 format = %d skip_last_label= yes grid_start = 0.755r grid_end = 0.82r grid_color = grey grid_thickness = 1p grid = yes </tick> </ticks>