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HiGlass Hi-C / genomic / large data viewer

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export default HeatmapTiledPixiTrack; declare class HeatmapTiledPixiTrack extends TiledPixiTrack<any> { constructor(context: any, options: any); pubSub: any; is2d: boolean; animate: any; uid: string; scaleBrush: import("d3-brush").BrushBehavior<any>; onTrackOptionsChanged: any; isShowGlobalMousePosition: any; isValueScaleLocked: any; pColorbarArea: import("pixi.js").Graphics; pColorbar: import("pixi.js").Graphics; axis: AxisPixi; colorScale: number[][]; gBase: import("d3-selection").Selection<SVGGElement, any, null, undefined>; gMain: import("d3-selection").Selection<SVGGElement, any, null, undefined>; gColorscaleBrush: import("d3-selection").Selection<SVGGElement, any, null, undefined>; brushing: boolean; prevIndUpperLeftTile: string; onMouseMoveZoom: any; dataLens: Float32Array<ArrayBuffer>; mouseMoveHandlerBound: (e: Object) => void; hideMousePosition: Function | undefined; /** * Mouse move handler * * @param {Object} e Event object. */ mouseMoveHandler(e: Object): void; mouseX: any; mouseY: any; /** * Mouse move and zoom handler. Is triggered on both events. * * @param {Number} absX Absolute X coordinate. * @param {Number} absY Absolute Y coordinate */ mouseMoveZoomHandler(absX?: number, absY?: number): void; scheduleRerender(): void; handleRerender(): void; /** * Get absolute (i.e., display) tile dimension and position. * * @param {Number} zoomLevel Current zoom level. * @param {Array} tilePos Tile position. * @return {Object} Object holding the absolute x, y, width, and height. */ getAbsTileDim(zoomLevel: number, tilePos: any[], mirrored: any): Object; updateValueScale(): (string | import("d3-scale").ScaleLinear<number, number, never>)[]; valueScale: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleLogarithmic<number, number, never> | undefined; limitedValueScale: import("d3-scale").ScaleLinear<number, number, never> | undefined; rerender(options: any, force: any): void; tileDataToCanvas(pixData: any): HTMLCanvasElement; exportData(): void; /** * Position sprite (the rendered tile) * * @param {Object} sprite PIXI sprite object. * @param {Number} zoomLevel Current zoom level. * @param {Array} tilePos X,Y position of tile. * @param {Boolean} mirrored If `true` tile is mirrored. */ setSpriteProperties(sprite: Object, zoomLevel: number, tilePos: any[], mirrored: boolean): void; refXScale(_: any): void; refYScale(_: any): void; newBrushOptions(selection: any): any; brushStart(): void; brushMoved(event: any): void; brushEnd(): void; setPosition(newPosition: any): void; setDimensions(newDimensions: any): void; removeColorbar(): void; drawColorbar(): void; colorbarHeight: number | undefined; northHandle: import("d3-selection").Selection<SVGRectElement, { type: string; }, SVGGElement, any> | undefined; exportColorBarSVG(): HTMLElement; /** * Set data lens size * * @param {Integer} newDataLensSize New data lens size. Needs to be an odd * integer. */ setDataLensSize(newDataLensSize: Integer): void; dataLensPadding: number | undefined; dataLensSize: number | undefined; binsPerTile(): any; /** * Get the data in the visible rectangle * * The parameter coordinates are in pixel coordinates * * @param {int} x: The upper left corner of the rectangle in pixel coordinates * @param {int} y: The upper left corner of the rectangle in pixel coordinates * @param {int} width: The width of the rectangle (pixels) * @param {int} height: The height of the rectangle (pixels) * * @returns {Array} A numjs array containing the data in the visible region * */ getVisibleRectangleData(x: int, y: int, width: int, height: int): any[]; /** * Convert the raw tile data to a rendered array of values which can be represented as a sprite. * * @param tile: The data structure containing all the tile information. Relevant to * this function are tile.tileData = \{'dense': [...], ...\} * and tile.graphics */ initTile(tile: any): void; updateTile(tile: any): void; destroyTile(tile: any): void; pixDataFunction(tile: any, pixData: any): void; /** * Render / draw a tile. * * @param {Object} tile Tile data to be rendered. */ renderTile(tile: Object): void; refScalesChanged(refXScale: any, refYScale: any): void; /** * Bypass this track's exportSVG function */ superSVG(): [HTMLElement, HTMLElement]; exportSVG(): HTMLElement[]; getVisiblePartOfUppLeftTile(): (string | number)[] | null; getIndicesOfVisibleDataInTile(tile: any): number[]; zoomed(newXScale: any, newYScale: any, k: any, tx: any, ty: any): void; /** * Helper method for adding a tile ID in place. Used by `tilesToId()`. * * @param {Array} tiles Array tile ID should be added to. * @param {Integer} zoomLevel Zoom level. * @param {Integer} row Column ID, i.e., y. * @param {Integer} column Column ID, i.e., x. * @param {Objwect} dataTransform ?? * @param {Boolean} mirrored If `true` tile is mirrored. */ addTileId(tiles: any[], zoomLevel: Integer, row: Integer, column: Integer, dataTransform: Objwect, mirrored?: boolean): void; /** * Convert tile positions to tile IDs * * @param {Array} xTiles X positions of tiles * @param {Array} yTiles Y positions of tiles * @param {Array} zoomLevel Current zoom level * @return {Array} List of tile IDs */ tilesToId(xTiles: any[], yTiles: any[], zoomLevel: any[]): any[]; calculateVisibleTiles(): void; zoomLevel: number | undefined; xTiles: number[] | undefined; yTiles: number[] | undefined; mirrorTiles(): boolean; contextMenuItems(trackX: any, trackY: any): never[]; getMouseOverHtml(trackX: any, trackY: any): string; /** * Get the tile's position in its coordinate system. * * @description * Normally the absolute coordinate system are the genome basepair positions */ getTilePosAndDimensions(zoomLevel: any, tilePos: any, binsPerTileIn: any): { tileX: number; tileY: number; tileWidth: number; tileHeight: number; }; /** * The local tile identifier * * @param {array} tile Tile definition array to be converted to id. Tile * array must contain `[zoomLevel, xPos, yPos]` and two props `mirrored` and * `dataTransform`. */ tileToLocalId(tile: array): string; /** * The tile identifier used on the server */ tileToRemoteId(tile: any): string; localToRemoteId(remoteId: any): any; } import TiledPixiTrack from './TiledPixiTrack'; import AxisPixi from './AxisPixi';