UNPKG

hierarchic-heatmap-table-component

Version:

A visualisation tool for displaying rows in a hiearchic manner with heatmap capabilities

1,096 lines (1,095 loc) 52.8 kB
{ "entry" : { "overview" : { "history" : { "proteinExistence" : "Evidence_at_protein_level", "proteinExistenceInfo" : null, "nextprotIntegrationDate" : 1268045809554, "nextprotUpdateDate" : 1469654657297, "uniprotIntegrationDate" : 1101204000000, "uniprotUpdateDate" : 1465380000000, "uniprotVersion" : "153", "lastSequenceUpdate" : "2011-04-05", "sequenceVersion" : "3", "formattedNextprotUpdateDate" : "2016-07-27", "formattedUniprotIntegrationDate" : "2004-11-23", "formattedUniprotUpdateDate" : "2016-06-08", "proteinExistenceRaw" : "protein level", "proteinExistenceLevel" : 1, "formattedNextprotIntegrationDate" : "2010-03-08" }, "families" : [ { "familyId" : 68092, "accession" : "FA-03732", "name" : "Nav1.7/SCN9A", "level" : "Subfamily", "description" : "Belongs to the sodium channel (TC 1.A.1.10) family. Nav1.7/SCN9A subfamily.", "region" : null, "parent" : { "familyId" : 68082, "accession" : "FA-03722", "name" : "Sodium channel (TC 1.A.1.10)", "level" : "Family", "description" : null, "region" : null, "parent" : null } } ], "proteinNames" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845993", "category" : "protein", "name" : "Sodium channel protein type 9 subunit alpha", "parentId" : null, "mainEntityName" : null, "synonyms" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845985", "category" : "protein", "name" : "Neuroendocrine sodium channel", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "short", "id" : "PR_845977", "category" : "protein", "name" : "hNE-Na", "parentId" : "PR_845985", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "short name", "value" : "hNE-Na" } ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Neuroendocrine sodium channel" }, { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845981", "category" : "protein", "name" : "Peripheral sodium channel 1", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "short", "id" : "PR_845980", "category" : "protein", "name" : "PN1", "parentId" : "PR_845981", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "short name", "value" : "PN1" } ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Peripheral sodium channel 1" }, { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845989", "category" : "protein", "name" : "Sodium channel protein type IX subunit alpha", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Sodium channel protein type IX subunit alpha" }, { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845991", "category" : "protein", "name" : "Voltage-gated sodium channel subunit alpha Nav1.7", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Voltage-gated sodium channel subunit alpha Nav1.7" } ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Sodium channel protein type 9 subunit alpha" } ], "geneNames" : [ { "clazz" : "GENE_NAMES", "type" : "gene name", "qualifier" : null, "id" : "PR_1202718", "category" : "gene name", "name" : "SCN9A", "parentId" : null, "mainEntityName" : null, "synonyms" : [ { "clazz" : "GENE_NAMES", "type" : "gene name", "qualifier" : null, "id" : "PR_1202717", "category" : "gene name", "name" : "NENA", "parentId" : "PR_1202718", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "gene name", "value" : "NENA" } ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "gene name", "value" : "SCN9A" } ], "functionalRegionNames" : null, "cleavedRegionNames" : null, "additionalNames" : null, "isoformNames" : [ { "clazz" : null, "type" : "name", "qualifier" : null, "id" : null, "category" : null, "name" : "Iso 2", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "name", "value" : "Iso 2" }, { "clazz" : null, "type" : "name", "qualifier" : null, "id" : null, "category" : null, "name" : "Iso 3", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "name", "value" : "Iso 3" }, { "clazz" : null, "type" : "name", "qualifier" : null, "id" : null, "category" : null, "name" : "Iso 1", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "name", "value" : "Iso 1" }, { "clazz" : null, "type" : "name", "qualifier" : null, "id" : null, "category" : null, "name" : "Iso 4", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "name", "value" : "Iso 4" } ], "proteinExistenceInfo" : null, "mainProteinName" : "Sodium channel protein type 9 subunit alpha", "mainGeneName" : "SCN9A", "proteinExistence" : "Evidence_at_protein_level", "proteinExistenceLevel" : 1, "recommendedProteinName" : { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845993", "category" : "protein", "name" : "Sodium channel protein type 9 subunit alpha", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : true, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Sodium channel protein type 9 subunit alpha" }, "alternativeProteinNames" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845985", "category" : "protein", "name" : "Neuroendocrine sodium channel", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "short", "id" : "PR_845977", "category" : "protein", "name" : "hNE-Na", "parentId" : "PR_845985", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "short name", "value" : "hNE-Na" } ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Neuroendocrine sodium channel" }, { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845981", "category" : "protein", "name" : "Peripheral sodium channel 1", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "short", "id" : "PR_845980", "category" : "protein", "name" : "PN1", "parentId" : "PR_845981", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "short name", "value" : "PN1" } ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Peripheral sodium channel 1" }, { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845989", "category" : "protein", "name" : "Sodium channel protein type IX subunit alpha", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Sodium channel protein type IX subunit alpha" }, { "clazz" : "PROTEIN_NAMES", "type" : "name", "qualifier" : "full", "id" : "PR_845991", "category" : "protein", "name" : "Voltage-gated sodium channel subunit alpha Nav1.7", "parentId" : "PR_845993", "mainEntityName" : null, "synonyms" : [ ], "main" : false, "otherRecommendedEntityNames" : [ ], "composedName" : "full name", "value" : "Voltage-gated sodium channel subunit alpha Nav1.7" } ] }, "isoforms" : [ { "sequence" : "MAMLPPPGPQSFVHFTKQSLALIEQRIAERKSKEPKEEKKDDDEEAPKPSSDLEAGKQLPFIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRNSLENNETLESIMNTLESEEDFRKYFYYLEGSKDALLCGFSTDSGQCPEGYTCVKIGRNPDYGYTSFDTFSWAFLALFRLMTQDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKELEFQQMLDRLKKEQEEAEAIAAAAAEYTSIRRSRIMGLSESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESEDSIRRKSFHLGVEGHRRAHEKRLSTPNQSPLSIRGSLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSIFGDNESRRGSLFVPHRPQERRSSNISQASRSPPMLPVNGKMHSAVDCNGVVSLVDGRSALMLPNGQLLPEVIIDKATSDDSGTTNQIHKKRRCSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAIGNLVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINDDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLLSSFSSDNLTAIEEDPDANNLQIAVTRIKKGINYVKQTLREFILKAFSKKPKISREIRQAEDLNTKKENYISNHTLAEMSKGHNFLKEKDKISGFGSSVDKHLMEDSDGQSFIHNPSLTVTVPIAPGESDLENMNAEELSSDSDSEYSKVRLNRSSSSECSTVDNPLPGEGEEAEAEPMNSDEPEACFTDGCVWRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNFDNVGLGYLSLLQVATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNKKDMAFDNVNENSSPEKTDATSSTTSPPSYDSVTKPDKEKYEQDRTEKEDKGKDSKESKK", "md5" : "86708b0cf75ddd56b043666678ca3251", "isoformAccession" : "NX_Q15858-2", "swissProtDisplayedIsoform" : false, "mainEntityName" : { "clazz" : null, "type" : "name", "qualifier" : null, "id" : null, "category" : null, "name" : "Iso 2", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : null, "otherRecommendedEntityNames" : [ ], "composedName" : "name", "value" : "Iso 2" }, "synonyms" : [ ], "masterMapping" : [ { "lower" : 1, "upper" : 597 }, { "lower" : 688, "upper" : 6054 } ], "uniqueName" : "NX_Q15858-2", "sequenceLength" : 1988, "canonicalIsoform" : false, "isoelectricPointAsString" : "6.48", "massAsString" : "226359" }, { "sequence" : "MAMLPPPGPQSFVHFTKQSLALIEQRIAERKSKEPKEEKKDDDEEAPKPSSDLEAGKQLPFIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRNSLENNETLESIMNTLESEEDFRKYFYYLEGSKDALLCGFSTDSGQCPEGYTCVKIGRNPDYGYTSFDTFSWAFLALFRLMTQDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKELEFQQMLDRLKKEQEEAEAIAAAAAEYTSIRRSRIMGLSESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESEDSIRRKSFHLGVEGHRRAHEKRLSTPNQSPLSIRGSLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSIFGDNESRRGSLFVPHRPQERRSSNISQASRSPPMLPVNGKMHSAVDCNGVVSLVDGRSALMLPNGQLLPEGTTNQIHKKRRCSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAIGNLVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINDDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLLSSFSSDNLTAIEEDPDANNLQIAVTRIKKGINYVKQTLREFILKAFSKKPKISREIRQAEDLNTKKENYISNHTLAEMSKGHNFLKEKDKISGFGSSVDKHLMEDSDGQSFIHNPSLTVTVPIAPGESDLENMNAEELSSDSDSEYSKVRLNRSSSSECSTVDNPLPGEGEEAEAEPMNSDEPEACFTDGCVWRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNFDNVGLGYLSLLQVATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNKKDMAFDNVNENSSPEKTDATSSTTSPPSYDSVTKPDKEKYEQDRTEKEDKGKDSKESKK", "md5" : "2129f449126e48287bf2410b2d60bad9", "isoformAccession" : "NX_Q15858-3", "swissProtDisplayedIsoform" : false, "mainEntityName" : { "clazz" : null, "type" : "name", "qualifier" : null, "id" : null, "category" : null, "name" : "Iso 3", "parentId" : null, "mainEntityName" : null, "synonyms" : [ ], "main" : null, "otherRecommendedEntityNames" : [ ], "composedName" : "name", "value" : "Iso 3" }, "synonyms" : [ ], "masterMapping" : [ { "lower" : 1, "upper" : 687 }, { "lower" : 778, "upper" : 2031 }, { "lower" : 2065, "upper" : 6054 } ], "uniqueName" : "NX_Q15858-3", "sequenceLength" : 1977, "canonicalIsoform" : false, "isoelectricPointAsString" : "6.72", "massAsString" : "225227" }, { "sequence" : 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