grnsight/web-client/public/js/warnings.js

Web app and service for visualizing models of gene regulatory networks

export var displayWarnings = function (warnings) {
    $("#warningIntro").html("There were " + warnings.length + " warning(s) detected in this file. " +
      "The graph will be loaded, but may not be displayed accurately. Please note that" +
      " this file may not export properly if this error remains in the workbook. " +
      "We recommend you review your file and ensure that it is formatted correctly. " +
      "To view the details of the warning(s), please click on the \"Warnings List\" below.");
    var warningsString = "";
    var NUM_POSSIBLE_WARNINGS = 11;
    var warningCounts = {};
    var index = 0;
    // Fill printed with 0s programatically
    var printed = [];
    for (var i = 0; i < NUM_POSSIBLE_WARNINGS; i++) {
        printed.push(0);
    }

    var appendWarning = function (warning) {
        warningsString += warning.errorDescription + "<br><br>";
    };

    var createWarningsString = function (warningCount, index) {
        for (var i = 0; i < warningCount.length; i++) {
            if (warningCount.length <= 3) {
                appendWarning(warningCount[i]);
            } else if (printed[index] < 3) {
                appendWarning(warningCount[i]);
                printed[index]++;
            } else {
                warningsString += "<i> " + (+warningCount.length - 3) +
                " more warning(s) like this exist. </i> <br><br>";
                break;
            }
        }
    };

    for (let warning of warnings) {
        warningCounts[warning.warningCode] = (warningCounts[warning.warningCode]) ?
            [...warningCounts[warning.warningCode], warning] : [warning];
    }

    for (let warning in warningCounts) {
        createWarningsString(warningCounts[warning], index);
        index++;
    }

    $("#warningsList").html(warningsString);

    var screenHeight = $(window).height();
    var MIN_SCREEN_HEIGHT = 600;
    var BORDER = 425;
    var setPanel = (screenHeight - BORDER) + "px";
    var minPanel = (MIN_SCREEN_HEIGHT - BORDER) + "px";
    if (screenHeight > MIN_SCREEN_HEIGHT) {
        $("#list-frame").css({height: setPanel});
    } else {
        $("#list-frame").css({height: minPanel});
    }

    $("#warningsModal").modal("show");
};

export var displayPPINodeColorWarning = function (warningDisplayed) {
    if (warningDisplayed) {
        return;
    }

    $("#warningIntro").html("Protein-protein interaction node coloring warning.");
    $("#warningsList").html(
      ["You are displaying mRNA-level expression data on a protein-protein interaction network.",
          "Please note that this may not be the most appropriate representation of the data."].join(" ")
    );

    var screenHeight = $(window).height();
    var MIN_SCREEN_HEIGHT = 600;
    var BORDER = 425;
    var setPanel = screenHeight - BORDER + "px";
    var minPanel = MIN_SCREEN_HEIGHT - BORDER + "px";
    if (screenHeight > MIN_SCREEN_HEIGHT) {
        $("#list-frame").css({ height: setPanel });
    } else {
        $("#list-frame").css({ height: minPanel });
    }

    $("#warningsModal").modal("show");
};