generic-sequence-panel/dist/index.test.js

read feature and sequence data and produce highlighted fasta

"use strict";
var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
    return new (P || (P = Promise))(function (resolve, reject) {
        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
        step((generator = generator.apply(thisArg, _arguments || [])).next());
    });
};
var __importDefault = (this && this.__importDefault) || function (mod) {
    return (mod && mod.__esModule) ? mod : { "default": mod };
};
Object.defineProperty(exports, "__esModule", { value: true });
const jsx_runtime_1 = require("react/jsx-runtime");
/**
 * @vitest-environment jsdom
 */
const vitest_1 = require("vitest");
const react_1 = require("@testing-library/react");
const GenericGeneSeqPanel_1 = __importDefault(require("./components/GenericGeneSeqPanel"));
(0, vitest_1.test)("expect protein rendering", () => __awaiter(void 0, void 0, void 0, function* () {
    const { findByText } = (0, react_1.render)((0, jsx_runtime_1.jsx)(GenericGeneSeqPanel_1.default, { refseq: "X", start: 13201770, end: 13216729, gene: "WBGene00006749", nclistbaseurl: "https://s3.amazonaws.com/agrjbrowse/MOD-jbrowses/WormBase/WS287/c_elegans_PRJNA13758/", urltemplate: "tracks/Curated_Genes/{refseq}/trackData.jsonz", fastaurl: "https://s3.amazonaws.com/wormbase-modencode/fasta/current/c_elegans.PRJNA13758.WS284.genomic.fa.gz" }));
    yield findByText(/R12H7.1a.2/, {}, { timeout: 15000 });
}), 20000);