enome
Version:
A genome generation and evolution library.
111 lines • 7.52 kB
JavaScript
;
var __extends = (this && this.__extends) || (function () {
var extendStatics = Object.setPrototypeOf ||
({ __proto__: [] } instanceof Array && function (d, b) { d.__proto__ = b; }) ||
function (d, b) { for (var p in b) if (b.hasOwnProperty(p)) d[p] = b[p]; };
return function (d, b) {
extendStatics(d, b);
function __() { this.constructor = d; }
d.prototype = b === null ? Object.create(b) : (__.prototype = b.prototype, new __());
};
})();
var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
return new (P || (P = Promise))(function (resolve, reject) {
function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
function step(result) { result.done ? resolve(result.value) : new P(function (resolve) { resolve(result.value); }).then(fulfilled, rejected); }
step((generator = generator.apply(thisArg, _arguments || [])).next());
});
};
var __generator = (this && this.__generator) || function (thisArg, body) {
var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
function verb(n) { return function (v) { return step([n, v]); }; }
function step(op) {
if (f) throw new TypeError("Generator is already executing.");
while (_) try {
if (f = 1, y && (t = y[op[0] & 2 ? "return" : op[0] ? "throw" : "next"]) && !(t = t.call(y, op[1])).done) return t;
if (y = 0, t) op = [0, t.value];
switch (op[0]) {
case 0: case 1: t = op; break;
case 4: _.label++; return { value: op[1], done: false };
case 5: _.label++; y = op[1]; op = [0]; continue;
case 7: op = _.ops.pop(); _.trys.pop(); continue;
default:
if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) { _ = 0; continue; }
if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
if (op[0] === 6 && _.label < t[1]) { _.label = t[1]; t = op; break; }
if (t && _.label < t[2]) { _.label = t[2]; _.ops.push(op); break; }
if (t[2]) _.ops.pop();
_.trys.pop(); continue;
}
op = body.call(thisArg, _);
} catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
}
};
Object.defineProperty(exports, "__esModule", { value: true });
var enviro_rx_1 = require("enviro-rx");
var index_1 = require("../index");
var Organism = (function (_super) {
__extends(Organism, _super);
function Organism(genotype, options) {
var _this = _super.call(this) || this;
_this.genotype = genotype;
_this.options = options;
_this.alive = new index_1.ReactiveProperty(true);
_this.phenotype = _this.createPhenotype(_this.genotype);
return _this;
}
Object.defineProperty(Organism.prototype, "id", {
get: function () {
return this.genotype.id;
},
enumerable: true,
configurable: true
});
Organism.prototype.evaluation = function (env, evaluations) {
var _this = this;
return env
.agentInteractions(this.id)
.map(function (i) { return _this.observeInteraction(i); })
.bufferCount(this.options.interactions)
.map(function (d) { return Promise.all(d); })
.map(function (d) { return _this.evaluateObservations(d); })
.take(1)
.subscribe(function (e) { return __awaiter(_this, void 0, void 0, function () {
var _a, _b;
return __generator(this, function (_c) {
switch (_c.label) {
case 0:
_b = (_a = evaluations).next;
return [4, e];
case 1:
_b.apply(_a, [_c.sent()]);
return [2];
}
});
}); });
};
Organism.prototype.observeInteraction = function (interaction) {
return __awaiter(this, void 0, void 0, function () {
var _this = this;
return __generator(this, function (_a) {
return [2, Promise.resolve(interaction).then(function (i) { return _this.observe(i); })];
});
});
};
Organism.prototype.evaluateObservations = function (observations) {
return __awaiter(this, void 0, void 0, function () {
var _this = this;
return __generator(this, function (_a) {
return [2, observations.then(function (o) {
return _this.evaluate(o, _this.genotype, _this.phenotype);
})];
});
});
};
return Organism;
}(enviro_rx_1.Agent));
exports.Organism = Organism;
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