dicom-microscopy-viewer
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Interactive web-based viewer for DICOM Microscopy Images
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<h1 class="page-title">Source: dicom-microscopy-viewer.js</h1>
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<pre class="prettyprint source linenums"><code>import EVENTS from './events.js'
import { AnnotationGroup } from './annotation.js'
import { ParameterMapping } from './mapping.js'
import {
ColormapNames,
createColormap,
PaletteColorLookupTable,
buildPaletteColorLookupTable
} from './color.js'
import {
Comprehensive3DSR,
MicroscopyBulkSimpleAnnotations,
ParametricMap,
Segmentation,
VLWholeSlideMicroscopyImage,
formatMetadata,
groupMonochromeInstances,
groupColorInstances
} from './metadata.js'
import { ROI } from './roi.js'
import {
Point,
Multipoint,
Polyline,
Polygon,
Ellipsoid,
Ellipse
} from './scoord3d.js'
import {
applyInverseTransform,
applyTransform,
buildInverseTransform,
buildTransform,
computeRotation,
mapSlideCoordToPixelCoord,
mapPixelCoordToSlideCoord
} from './utils.js'
import {
LabelImageViewer,
OverviewImageViewer,
VolumeImageViewer
} from './viewer.js'
import {
OpticalPath
} from './opticalPath.js'
import {
Segment
} from './segment.js'
/**
* Namespace for annotations of DICOM Micrsocopy Bulk Simple Annotations
* instances.
*
* @namespace annotation
*/
const annotation = {
AnnotationGroup
}
/**
* Namespace for the viewer.
*
* @namespace api
* @deprecated use the viewer namespace instead
*/
const api = {
VLWholeSlideMicroscopyImageViewer: VolumeImageViewer
}
/**
* Namespace for the viewer.
*
* @namespace viewer
*/
const viewer = {
LabelImageViewer,
OverviewImageViewer,
VolumeImageViewer
}
/**
* Namespace for parameter mappings of DICOM Parametric Map instances.
*
* @namespace mapping
*/
const mapping = {
ParameterMapping
}
/**
* Namespace for working with DICOM Metadata.
*
* @namespace metadata
*/
const metadata = {
formatMetadata,
groupMonochromeInstances,
groupColorInstances,
MicroscopyBulkSimpleAnnotations,
ParametricMap,
Segmentation,
VLWholeSlideMicroscopyImage,
Comprehensive3DSR
}
/**
* Namespace for color.
*
* @namespace color
*/
const color = {
ColormapNames,
createColormap,
PaletteColorLookupTable,
buildPaletteColorLookupTable
}
/**
* Namespace for optical paths.
*
* @namespace opticalPath
*/
const opticalPath = {
OpticalPath
}
/**
* Namespace for 3-dimensional spatial coordinates (SCOORD3D).
*
* @namespace scoord3d
*/
const scoord3d = {
Point,
Multipoint,
Polyline,
Polygon,
Ellipsoid,
Ellipse
}
/**
* Namespace for regions of interest (ROIs).
*
* @namespace roi
*/
const roi = {
ROI
}
/**
* Namespace for segments of DICOM Segmentation instances.
*
* @namespace segment
*/
const segment = {
Segment
}
/**
* Namespace for viewer events.
*
* @namespace events
*/
const events = {
EVENTS
}
/**
* Namespace for various utilities.
*
* @namespace utils
*/
const utils = {
applyInverseTransform,
applyTransform,
buildInverseTransform,
buildTransform,
computeRotation,
mapSlideCoordToPixelCoord,
mapPixelCoordToSlideCoord
}
export {
annotation,
api,
color,
events,
mapping,
metadata,
opticalPath,
roi,
scoord3d,
segment,
utils,
viewer
}
</code></pre>
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<h2><a href="index.html">Home</a></h2><h3>Namespaces</h3><ul><li><a href="annotation.html">annotation</a></li><li><a href="api.html">api</a></li><li><a href="color.html">color</a></li><li><a href="events.html">events</a></li><li><a href="mapping.html">mapping</a></li><li><a href="metadata.html">metadata</a></li><li><a href="opticalPath.html">opticalPath</a></li><li><a href="roi.html">roi</a></li><li><a href="scoord3d.html">scoord3d</a></li><li><a href="segment.html">segment</a></li><li><a href="utils.html">utils</a></li><li><a href="viewer.html">viewer</a></li></ul><h3>Classes</h3><ul><li><a href="annotation.AnnotationGroup.html">AnnotationGroup</a></li><li><a href="color.PaletteColorLookupTable.html">PaletteColorLookupTable</a></li><li><a href="mapping.ParameterMapping.html">ParameterMapping</a></li><li><a href="mapping.Transformation.html">Transformation</a></li><li><a href="metadata.Comprehensive3DSR.html">Comprehensive3DSR</a></li><li><a href="metadata.MicroscopyBulkSimpleAnnotations.html">MicroscopyBulkSimpleAnnotations</a></li><li><a href="metadata.ParametricMap.html">ParametricMap</a></li><li><a href="metadata.Segmentation.html">Segmentation</a></li><li><a href="metadata.SOPClass.html">SOPClass</a></li><li><a href="metadata.VLWholeSlideMicroscopyImage.html">VLWholeSlideMicroscopyImage</a></li><li><a href="module.exports_module.exports.html">exports</a></li><li><a href="opticalPath.OpticalPath.html">OpticalPath</a></li><li><a href="roi.ROI.html">ROI</a></li><li><a href="scoord3d.Ellipse.html">Ellipse</a></li><li><a href="scoord3d.Ellipsoid.html">Ellipsoid</a></li><li><a href="scoord3d.Multipoint.html">Multipoint</a></li><li><a href="scoord3d.Point.html">Point</a></li><li><a href="scoord3d.Polygon.html">Polygon</a></li><li><a href="scoord3d.Polyline.html">Polyline</a></li><li><a href="scoord3d.Scoord3D.html">Scoord3D</a></li><li><a href="segment.Segment.html">Segment</a></li><li><a href="viewer.LabelImageViewer.html">LabelImageViewer</a></li><li><a href="viewer.OverviewImageViewer.html">OverviewImageViewer</a></li><li><a href="viewer.VolumeImageViewer.html">VolumeImageViewer</a></li></ul><h3>Global</h3><ul><li><a href="global.html#addTask">addTask</a></li><li><a href="global.html#cancelTask">cancelTask</a></li><li><a href="global.html#decode">decode</a></li><li><a href="global.html#getStatistics">getStatistics</a></li><li><a href="global.html#handleMessageFromWorker">handleMessageFromWorker</a></li><li><a href="global.html#initialize">initialize</a></li><li><a href="global.html#loadWebWorkerTask">loadWebWorkerTask</a></li><li><a href="global.html#setTaskPriority">setTaskPriority</a></li><li><a href="global.html#spawnWebWorker">spawnWebWorker</a></li><li><a href="global.html#startTaskOnWebWorker">startTaskOnWebWorker</a></li><li><a href="global.html#terminateAllWebWorkers">terminateAllWebWorkers</a></li><li><a href="global.html#transform">transform</a></li></ul>
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