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cttv.genome

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Lightweight genome browser for CTTV targets based on TnT Genome

CTTV/targetGenomeBrowser

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<!DOCTYPE html> <head> <meta charset="utf-8"> <link rel="stylesheet" href="../node_modules/mocha/mocha.css" /> </head> <body> <div id="mocha"></div> <!-- <div id="TestID"></div> --> <script src="../node_modules/mocha/mocha.js"></script> <script src="../node_modules/chai/chai.js"></script> <script src="../node_modules/lodash/lodash-min.js"></script> <script> mocha.ui('bdd'); mocha.reporter('html'); assert = chai.assert; </script> <script src="http://d3js.org/d3.v3.min.js"></script> <link rel="stylesheet" href="../lib/tnt.css" type="text/css" /> <script src="../build/cttv.targetGenomeBrowser.js"></script> <!-- Here we include all the test files --> <script src="rest/rest.js"></script> <script src="utils/utils.js"></script> <script src="tree/node.js"></script> <script src="tree/label.js"></script> <script src="tree/tree_vis.js"></script> <!-- Test the themes --> <h1>Themes</h1> <!-- Track themes --> <h2>Tracks</h2> <h3>Minimal</h3> <div id="minimal"></div> <script src="../themes/track/minimal/minimal.js"></script> <h3>Legend</h3> <div id="legend"></div> <script src="../themes/track/legend/legend.js"></script> <h3>Tooltips</h3> <div id="tooltips"></div> <script src="../themes/track/tooltips/tooltips.js"></script> <h3>Resizable-div</h3> <div id="resizable-div"></div> <script src="../themes/track/resizable-div/resizable-div.js"></script> <h3>Resize</h3> <div id="resize"></div> <script src="../themes/track/resize/resize.js"></script> <h3>Compact</h3> <div id="compact"></div> <link rel="stylesheet" href="../themes/track/compact/css/compact.css" type="text/css" /> <script src="../themes/track/compact/compact.js"></script> <h3>Buttons</h3> <div id="buttons"></div> <script src="../themes/track/buttons/buttons.js"></script> <!-- <h3>Mobile</h3> --> <!-- <div id="mobile"></div> --> <!-- <script src="../themes/track/mobile/mobile.js"></script> --> <h3>Comparative</h3> <div id="comparative"></div> <script src="../themes/track/comparative/comparative.js"></script> <h3>Minimal track</h3> <div id="track_minimal"></div> <script src="../themes/track/track_minimal/track_minimal.js"></script> <h3>Sequence Track</h3> <div id="sequence_track"></div> <script src="../themes/track/sequence_track/sequence_track.js"></script> <h3>Line Track</h3> <div id="line_track"></div> <script src="../themes/track/line_track/line_track.js"></script> <h3>Swap tracks</h3> <div id="swap_tracks"></div> <script src="../themes/track/swap_tracks/swap_tracks.js"></script> <h3>Switch Tracks</h3> <div id="switch_tracks"></div> <script src="../themes/track/switch_tracks/switch_tracks.js"></script> <h3>Dynamic Track</h3> <div id="dynamic_track"></div> <script src="../themes/track/dynamic_track/dynamic_track.js"></script> <h3>2 Data and Features track</h3> <div id="2_data_and_features"></div> <script src="../themes/track/2_data_and_features/2_data_and_features.js"></script> <!-- <script src="../themes/track/orthologues_tree/orthologues_tree.js"></script> --> <!-- Tree themes --> <h2>Trees</h2> <h3>Sort nodes</h3> <div id="sort_nodes"></div> <script src="../themes/tree/sort_nodes/sort_nodes.js"></script> <h3>Ensembl species</h3> <div id="ensembl_species"></div> <script src="../themes/tree/ensembl_species/ensembl_species.js"></script> <h3>Swap Nodes</h3> <div id="swap_nodes"></div> <script src="../themes/tree/swap_nodes/swap_nodes.js"></script> <h3>Tooltips</h3> <div id="tree_tooltips"></div> <script src="../themes/tree/tooltip/tooltip.js"></script> <h3>Ensembl Gene Tree</h3> <div id="ensembl_gene_tree"></div> <script src="../themes/tree/ensembl_gene_tree/ensembl_gene_tree.js"></script> <h3>Scaled Branches</h3> <div id="scaled_branches"></div> <script src="../themes/tree/scaled_branches/scaled_branches.js"></script> <h3>Labels</h3> <div id="labels"></div> <script src="../themes/tree/labels/labels.js"></script> <h3>Colors</h3> <div id="colors"></div> <script src="../themes/tree/colors/colors.js"></script> <h3>Collapse Nodes</h3> <div id="collapse_nodes"></div> <script src="../themes/tree/collapse_nodes/collapse_nodes.js"></script> <h3>Layout Transition</h3> <div id="layout_transition"></div> <script src="../themes/tree/layout_transition/layout_transition.js"></script> <h3>Simple Annotation</h3> <div id="simple_annotation"></div> <script src="../themes/tree_annot/tree_annotation_simple/tree_annotation_simple.js"></script> <h3>Front</h3> <div id="front"></div> <script src="../themes/tree_annot/front/front.js"></script> <h3>TreeFam tree</h3> <div id="treefam_tree"></div> <script src="../themes/tree_annot/treefam_tree/treefam_tree.js"></script> <script src="themes/themes.js"></script> <script> if (window.mochaPhantomJS) { mochaPhantomJS.run(); } else { mocha.run(); } </script> </body> </html>