clanviewer/examples/example2.json

A component to visualise the relationships between the Pfam families in a clan

{
  "clan_acc":"CL0124",
  "clan_id":"Peptidase_PA",
  "total_occurrences":154021,
  "members":[
    {"pfama_acc":"PF03761","pfama_id":"DUF316","num_full":189},
    {"pfama_acc":"PF00949","pfama_id":"Peptidase_S7","num_full":4286},
    {"pfama_acc":"PF00863","pfama_id":"Peptidase_C4","num_full":1471},
    {"pfama_acc":"PF01577","pfama_id":"Peptidase_S30","num_full":1862},
    {"pfama_acc":"PF00089","pfama_id":"Trypsin","num_full":45666},
    {"pfama_acc":"PF00944","pfama_id":"Peptidase_S3","num_full":1093},
    {"pfama_acc":"PF00548","pfama_id":"Peptidase_C3","num_full":5564},
    {"pfama_acc":"PF01732","pfama_id":"DUF31","num_full":532},
    {"pfama_acc":"PF02907","pfama_id":"Peptidase_S29","num_full":17261},
    {"pfama_acc":"PF02395","pfama_id":"Peptidase_S6","num_full":3984},
    {"pfama_acc":"PF02122","pfama_id":"Peptidase_S39","num_full":571},
    {"pfama_acc":"PF03510","pfama_id":"Peptidase_C24","num_full":142},
    {"pfama_acc":"PF00947","pfama_id":"Pico_P2A","num_full":2892},
    {"pfama_acc":"PF05409","pfama_id":"Peptidase_C30","num_full":1017},
    {"pfama_acc":"PF05416","pfama_id":"Peptidase_C37","num_full":836},
    {"pfama_acc":"PF05578","pfama_id":"Peptidase_S31","num_full":304},
    {"pfama_acc":"PF05579","pfama_id":"Peptidase_S32","num_full":481},
    {"pfama_acc":"PF05580","pfama_id":"Peptidase_S55","num_full":1627},
    {"pfama_acc":"PF09342","pfama_id":"DUF1986","num_full":40},
    {"pfama_acc":"PF10459","pfama_id":"Peptidase_S46","num_full":1393},
    {"pfama_acc":"PF12380","pfama_id":"Peptidase_C62","num_full":13},
    {"pfama_acc":"PF12381","pfama_id":"Peptidase_C3G","num_full":50},
    {"pfama_acc":"PF13365","pfama_id":"Trypsin_2","num_full":62642},
    {"pfama_acc":"PF13611","pfama_id":"Peptidase_S76","num_full":105}
  ],
  "relationships":[
    {"pfama_acc_1":"PF03761","pfama_acc_2":"PF00089","evalue":1.9e-05},
    {"pfama_acc_1":"PF00949","pfama_acc_2":"PF01732","evalue":3.1e-12},
    {"pfama_acc_1":"PF00949","pfama_acc_2":"PF13365","evalue":0.00096},
    {"pfama_acc_1":"PF00949","pfama_acc_2":"PF10459","evalue":0.0054},
    {"pfama_acc_1":"PF00863","pfama_acc_2":"PF13365","evalue":0.00023},
    {"pfama_acc_1":"PF01577","pfama_acc_2":"PF13611","evalue":2.1e-09},
    {"pfama_acc_1":"PF00089","pfama_acc_2":"PF13365","evalue":3e-11},
    {"pfama_acc_1":"PF00089","pfama_acc_2":"PF09342","evalue":7.5e-09},
    {"pfama_acc_1":"PF00089","pfama_acc_2":"PF03761","evalue":1.6e-05},
    {"pfama_acc_1":"PF00944","pfama_acc_2":"PF13365","evalue":0.0035},
    {"pfama_acc_1":"PF01732","pfama_acc_2":"PF00949","evalue":8.9e-12},
    {"pfama_acc_1":"PF02122","pfama_acc_2":"PF13365","evalue":0.001},
    {"pfama_acc_1":"PF03510","pfama_acc_2":"PF05416","evalue":2.1e-07},
    {"pfama_acc_1":"PF05416","pfama_acc_2":"PF03510","evalue":2.5e-06},
    {"pfama_acc_1":"PF05579","pfama_acc_2":"PF13365","evalue":1.2e-06},
    {"pfama_acc_1":"PF05580","pfama_acc_2":"PF13365","evalue":0.0025},
    {"pfama_acc_1":"PF09342","pfama_acc_2":"PF00089","evalue":1e-09},
    {"pfama_acc_1":"PF10459","pfama_acc_2":"PF13365","evalue":0.00079},
    {"pfama_acc_1":"PF10459","pfama_acc_2":"PF00949","evalue":0.0017},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF00089","evalue":1.6e-12},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF05579","evalue":4.2e-06},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF10459","evalue":0.00016},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF00949","evalue":0.00028},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF05580","evalue":0.00034},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF02122","evalue":0.00055},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF01732","evalue":0.005},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF10459","evalue":0.0053},
    {"pfama_acc_1":"PF13365","pfama_acc_2":"PF00863","evalue":0.0071},
    {"pfama_acc_1":"PF13611","pfama_acc_2":"PF01577","evalue":3.9e-10}
  ]
}