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jQuery,K=!1;k.widget("ui.menu",{version:"1.9.2",defaultElement:"<ul>",delay:300,options:{icons:{submenu:"ui-icon-carat-1-e"},menus:"ul",position:{my:"left top",at:"right top"},role:"menu",blur:null,focus:null,select:null},_create:function(){this.activeMenu=this.element;this.element.uniqueId().addClass("ui-menu ui-widget ui-widget-content ui-corner-all").toggleClass("ui-menu-icons",!!this.element.find(".ui-icon").length).attr({role:this.options.role,tabIndex:0}).bind("click"+this.eventNamespace,k.proxy(function(a){this.options.disabled&&
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this.element.find(".ui-menu-item").removeClass("ui-menu-item").removeAttr("role").removeAttr("aria-disabled").children("a").removeUniqueId().removeClass("ui-corner-all ui-state-hover").removeAttr("tabIndex").removeAttr("role").removeAttr("aria-haspopup").children().each(function(){var a=k(this);a.data("ui-menu-submenu-carat")&&a.remove()});this.element.find(".ui-menu-divider").removeClass("ui-menu-divider ui-widget-content")},_keydown:function(a){function b(a){return a.replace(/[\-\[\]{}()*+?.,\\\^$|#\s]/g,
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k(this);/[^\-\u00e2\u20ac\u201d\u00e2\u20ac\u201c\s]/.test(a.text())||a.addClass("ui-widget-content ui-menu-divider")});a.children(".ui-state-disabled").attr("aria-disabled","true");this.active&&!k.contains(this.element[0],this.active[0])&&this.blur()},_itemRole:function(){return{menu:"menuitem",listbox:"option"}[this.options.role]},focus:function(a,b){var c;this.blur(a,a&&"focus"===a.type);this._scrollIntoView(b);this.active=b.first();c=this.active.children("a").addClass("ui-state-focus");this.options.role&&
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b&&b.length&&(this._open(b.parent()),this._delay(function(){this.focus(a,b)}))},next:function(a){this._move("next","first",a)},previous:function(a){this._move("prev","last",a)},isFirstItem:function(){return this.active&&!this.active.prevAll(".ui-menu-item").length},isLastItem:function(){return this.active&&!this.active.nextAll(".ui-menu-item").length},_move:function(a,b,c){var d;this.active&&("first"===a||"last"===a?d=this.active["first"===a?"prevAll":"nextAll"](".ui-menu-item").eq(-1):d=this.active[a+
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c,d;this.active?this.isFirstItem()||(this._hasScroll()?(c=this.active.offset().top,d=this.element.height(),this.active.prevAll(".ui-menu-item").each(function(){return b=k(this),0<b.offset().top-c+d}),this.focus(a,b)):this.focus(a,this.activeMenu.children(".ui-menu-item").first())):this.next(a)},_hasScroll:function(){return this.element.outerHeight()<this.element.prop("scrollHeight")},select:function(a){this.active=this.active||k(a.target).closest(".ui-menu-item");var b={item:this.active};this.active.has(".ui-menu").length||
this.collapseAll(a,!0);this._trigger("select",a,b)}})}catch(gb){System.out.println("JSmolMenu failed to load jQuery.ui.menu -- jQuery version conflict?")}var p=Jmol.Swing;p.menuInitialized||(p.menuCounter=0,p.menuInitialized=1,p.__getMenuStyle=function(a){return"\t.jmolPopupMenu{font-family:Arial,sans-serif;font-size:11px;position:absolute;z-index:"+Jmol._getZ(a,"menu")+'}\t.jmolPopupMenu,.jmolPopupMenu .ui-corner-all{border-radius:5px}\t.jmolPopupMenu,.jmolPopupMenu .ui-widget-content{border:1px solid #a6c9e2;background-color:#fcfdfd;color:#222}\t.jmolPopupMenu a{color:#222;font-size:10px;}\t.jmolPopupMenu input[type="checkbox"]{vertical-align:middle;}\t.jmolPopupMenu,.jmolPopupMenu .ui-menu{list-style:none;padding:2px;margin:0;display:block;outline:none;box-shadow:1px 1px 5px rgba(50,50,50,0.75)}\t.jmolPopupMenu .ui-menu{margin-top:-3px;position:absolute}\t.jmolPopupMenu .ui-menu-item{cursor:pointer;margin:0 2ex 0 0;padding:0;width:100%}\t.jmolPopupMenu .ui-menu-divider{margin:3px 1px;height:0;font-size:0;line-height:0;border-width:1px 0 0 0}\t.jmolPopupMenu .ui-menu-item a{text-decoration:none;display:block;padding:0.05em 0.4em;white-space:nowrap;border:1px solid transparent}\t.jmolPopupMenu .ui-menu-icons{position:relative}\t.jmolPopupMenu .ui-menu-icons .ui-menu-item a{position:relative;padding-left:2em}\t.jmolPopupMenu .ui-icon{display:block;text-indent:-99999px;overflow:hidden;background-repeat:no-repeat;position:absolute;top:.2em;left:.2em}\t.jmolPopupMenu .ui-menu-icon{position:static;float:right}\t.jmolPopupMenu .ui-icon-carat-1-e{min-width:2ex;text-align:right;background-image:none;background-position:0 0}\t.jmolPopupMenu .ui-icon-carat-1-e:after{content:"\\25B8"}\t.jmolPopupMenu .ui-state-default{border:1px solid #c5dbec;background:#dfeffc;color:#2e6e9e}\t.jmolPopupMenu .ui-state-default a{color:#2e6e9e;text-decoration:none}\t.jmolPopupMenu .ui-state-hover,.jmolPopupMenu .ui-state-focus{border:1px solid #79b7e7;background:#d0e5f5;color:#1d5987}\t.jmolPopupMenu .ui-state-hover a{color:#1d5987;text-decoration:none}\t.jmolPopupMenu .ui-state-active{border:1px solid #79b7e7;background:#f5f8f9;color:#e17009}\t.jmolPopupMenu .ui-state-active a{color:#e17009;text-decoration:none}\t.jmolPopupMenu .ui-state-highlight{border:1px solid #fad42e;background:#fbec88;color:#363636}\t.jmolPopupMenu .ui-state-highlight a{color:#363636}\t.jmolPopupMenu .ui-state-disabled *{color:#d6d6d6!important;font-weight:normal;cursor:default}\t.jmolPopupMenu .ui-state-disabled a:hover{background-color:transparent!important;border-color:transparent!important}\t.jmolPopupMenu .ui-state-disabled .ui-icon{filter:Alpha(Opacity=35)}'},
p.setMenu=function(a){p.__getMenuStyle&&Jmol.$after("head","<style>"+p.__getMenuStyle(a.applet)+"</style>");p.__getStyle=null;a.tainted=!0;a.popupMenu=a;a.id="top";a.id=p.getMenuID(a);a.applet._menus||(a.applet._menus={});a.applet._menus[a.name]=a;Jmol.$after("body",'<ul id="'+a.id+'" class="jmolPopupMenu"></ul>');a.setContainer(Jmol.$("#"+a.id))},p.showMenu=function(a,b,c){Jmol._showMenuCallback&&Jmol._showMenuCallback(a,b,c);a.tainted&&(a.container.html(a.toHTML()),a.tainted=!1,p.bindMenuActionCommands(a,
!0));a.setPosition();a.container.hide().menu().menu("refresh").show();a.visible=!0;a.timestamp=System.currentTimeMillis();a.dragBind(!0);a.container.unbind("clickoutjsmol");a.container.bind("clickoutjsmol mousemoveoutjsmol",function(){1E3<System.currentTimeMillis()-a.timestamp&&p.hideMenu(a)});a.container.bind("contextmenu",function(){return!1})},p.disposeMenu=function(a){p.hideMenu(a);p.bindMenuActionCommands(a,!1);delete a.applet._menus[a.name]},p.initMenuItem=function(a){a.applet=a.popupMenu.applet;
a.id=p.getMenuID(a);a.icon&&(a.icon='<img src="'+a.applet._j2sPath+"/"+a.icon+'" style="max-height: 20px;" />')},p.getMenuID=function(a){var b=a.popupMenu;return b.applet._id+"_"+b.name+"_"+a.id+"_"+ ++p.menuCounter},p.hideMenu=function(a){a.visible&&(a.dragBind(!1),a.container.hide(),a.visible=a.isDragging=!1)},p.bindMenuActionCommands=function(a,b){for(var c=a.getComponentCount(),d=0;d<c;d++)p.bindMenuActionCommands(a.getComponent(d),b);Jmol.$documentOff("click",a.id);b&&Jmol.$documentOn("click",
a.id,function(){a.itemListener?(a.selected=a.btnType==javajs.swing.JMenuItem.TYPE_CHECKBOX?Jmol.$prop(a.id+"-cb","checked"):!0,p.hideMenus(a.applet),a.itemListener.itemStateChanged({getSource:function(){return a}})):a.actionListener&&(p.hideMenus(a.applet),a.actionListener.actionPerformed({getSource:function(){return a},getActionCommand:function(){return a.actionCommand}}))})});y("J.popup");B(["J.popup.PopupResource"],"J.popup.MainPopupResourceBundle",["JU.PT","J.i18n.GT","JV.JC","$.Viewer"],function(){c$=
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b=["jmolMenu","Jmol","version",JV.JC.version,"date",JV.JC.date,"jmolorg","http://www.jmol.org","help",J.i18n.GT._("Jmol Script Commands"),"mouse",J.i18n.GT._("Mouse Manual"),"translations",J.i18n.GT._("Translations"),"systemMenu",J.i18n.GT._("System"),"os",JV.Viewer.strOSName,"JAVAmemTotal","?","JAVAmemMax","?","JAVAprocessors","?","javaVender",JV.Viewer.strJavaVendor,"javaVersion",JV.Viewer.strJavaVersion,"modelSetMenu",J.i18n.GT._("No atoms loaded"),"configurationComputedMenu",J.i18n.GT._("Configurations"),
"elementsComputedMenu",J.i18n.GT._("Element"),"FRAMESbyModelComputedMenu",J.i18n.GT._("Model/Frame"),"languageComputedMenu",J.i18n.GT._("Language"),"PDBaaResiduesComputedMenu",J.i18n.GT._("By Residue Name"),"PDBnucleicResiduesComputedMenu",J.i18n.GT._("By Residue Name"),"PDBcarboResiduesComputedMenu",J.i18n.GT._("By Residue Name"),"PDBheteroComputedMenu",J.i18n.GT._("By HETATM"),"surfMoComputedMenuText",J.i18n.GT._("Molecular Orbitals ({0})"),"SYMMETRYSelectComputedMenu",J.i18n.GT._("Symmetry"),"SYMMETRYShowComputedMenu",
J.i18n.GT._("Space Group"),"SYMMETRYhide",J.i18n.GT._("Hide Symmetry"),"hiddenModelSetText",J.i18n.GT._("Model information"),"selectMenuText",J.i18n.GT._("Select ({0})"),"allModelsText",J.i18n.GT._("All {0} models"),"configurationMenuText",J.i18n.GT._("Configurations ({0})"),"modelSetCollectionText",J.i18n.GT._("Collection of {0} models"),"atomsText",J.i18n.GT._("atoms: {0}"),"bondsText",J.i18n.GT._("bonds: {0}"),"groupsText",J.i18n.GT._("groups: {0}"),"chainsText",J.i18n.GT._("chains: {0}"),"polymersText",
J.i18n.GT._("polymers: {0}"),"modelMenuText",J.i18n.GT._("model {0}"),"viewMenuText",J.i18n.GT._("View {0}"),"mainMenuText",J.i18n.GT._("Main Menu"),"biomoleculesMenuText",J.i18n.GT._("Biomolecules"),"biomoleculeText",J.i18n.GT._("biomolecule {0} ({1} atoms)"),"loadBiomoleculeText",J.i18n.GT._("load biomolecule {0} ({1} atoms)"),"selectAll",J.i18n.GT._("All"),"selectNone",J.i18n.GT._("None"),"hideNotSelectedCB",J.i18n.GT._("Display Selected Only"),"invertSelection",J.i18n.GT._("Invert Selection"),
"viewMenu",J.i18n.GT._("View"),"best",J.i18n.GT._("Best"),"front",J.i18n.GT._("Front"),"left",J.i18n.GT._("Left"),"right",J.i18n.GT._("Right"),"top",JU.PT.split(J.i18n.GT._('Top[as in "view from the top, from above" - (translators: remove this bracketed part]'),"[")[0],"bottom",J.i18n.GT._("Bottom"),"back",J.i18n.GT._("Back"),"axisX",J.i18n.GT._("Axis x"),"axisY",J.i18n.GT._("Axis y"),"axisZ",J.i18n.GT._("Axis z"),"axisA",J.i18n.GT._("Axis a"),"axisB",J.i18n.GT._("Axis b"),"axisC",J.i18n.GT._("Axis c"),
"sceneComputedMenu",J.i18n.GT._("Scenes"),"PDBproteinMenu",J.i18n.GT._("Protein"),"allProtein",J.i18n.GT._("All"),"proteinBackbone",J.i18n.GT._("Backbone"),"proteinSideChains",J.i18n.GT._("Side Chains"),"polar",J.i18n.GT._("Polar Residues"),"nonpolar",J.i18n.GT._("Nonpolar Residues"),"positiveCharge",J.i18n.GT._("Basic Residues (+)"),"negativeCharge",J.i18n.GT._("Acidic Residues (-)"),"noCharge",J.i18n.GT._("Uncharged Residues"),"PDBnucleicMenu",J.i18n.GT._("Nucleic"),"allNucleic",J.i18n.GT._("All"),
"DNA",J.i18n.GT._("DNA"),"RNA",J.i18n.GT._("RNA"),"nucleicBackbone",J.i18n.GT._("Backbone"),"nucleicBases",J.i18n.GT._("Bases"),"atPairs",J.i18n.GT._("AT pairs"),"gcPairs",J.i18n.GT._("GC pairs"),"auPairs",J.i18n.GT._("AU pairs"),"PDBheteroMenu",J.i18n.GT._("Hetero"),"allHetero",J.i18n.GT._('All PDB "HETATM"'),"Solvent",J.i18n.GT._("All Solvent"),"Water",J.i18n.GT._("All Water"),"nonWaterSolvent",J.i18n.GT._("Nonaqueous Solvent")+" (solvent and not water)","exceptWater",J.i18n.GT._("Nonaqueous HETATM")+
" (hetero and not water)","Ligand",J.i18n.GT._("Ligand"),"allCarbo",J.i18n.GT._("All"),"PDBcarboMenu",J.i18n.GT._("Carbohydrate"),"PDBnoneOfTheAbove",J.i18n.GT._("None of the above"),"renderMenu",J.i18n.GT._("Style"),"renderSchemeMenu",J.i18n.GT._("Scheme"),"renderCpkSpacefill",J.i18n.GT._("CPK Spacefill"),"renderBallAndStick",J.i18n.GT._("Ball and Stick"),"renderSticks",J.i18n.GT._("Sticks"),"renderWireframe",J.i18n.GT._("Wireframe"),"PDBrenderCartoonsOnly",J.i18n.GT._("Cartoon"),"PDBrenderTraceOnly",
J.i18n.GT._("Trace"),"atomMenu",J.i18n.GT._("Atoms"),"atomNone",J.i18n.GT._("Off"),"atom15",J.i18n.GT.i(J.i18n.GT._("{0}% van der Waals"),15),"atom20",J.i18n.GT.i(J.i18n.GT._("{0}% van der Waals"),20),"atom25",J.i18n.GT.i(J.i18n.GT._("{0}% van der Waals"),25),"atom50",J.i18n.GT.i(J.i18n.GT._("{0}% van der Waals"),50),"atom75",J.i18n.GT.i(J.i18n.GT._("{0}% van der Waals"),75),"atom100",J.i18n.GT.i(J.i18n.GT._("{0}% van der Waals"),100),"bondMenu",J.i18n.GT._("Bonds"),"bondNone",J.i18n.GT._("Off"),
"bondWireframe",J.i18n.GT._("On"),"bond100",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.10"),"bond150",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.15"),"bond200",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.20"),"bond250",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.25"),"bond300",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.30"),"hbondMenu",J.i18n.GT._("Hydrogen Bonds"),"hbondNone",J.i18n.GT._("Off"),"hbondCalc",J.i18n.GT._("Calculate"),"hbondWireframe",J.i18n.GT._("On"),"PDBhbondSidechain",J.i18n.GT._("Set H-Bonds Side Chain"),
"PDBhbondBackbone",J.i18n.GT._("Set H-Bonds Backbone"),"hbond100",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.10"),"hbond150",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.15"),"hbond200",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.20"),"hbond250",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.25"),"hbond300",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.30"),"ssbondMenu",J.i18n.GT._("Disulfide Bonds"),"ssbondNone",J.i18n.GT._("Off"),"ssbondWireframe",J.i18n.GT._("On"),"PDBssbondSidechain",J.i18n.GT._("Set SS-Bonds Side Chain"),
"PDBssbondBackbone",J.i18n.GT._("Set SS-Bonds Backbone"),"ssbond100",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.10"),"ssbond150",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.15"),"ssbond200",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.20"),"ssbond250",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.25"),"ssbond300",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.30"),"PDBstructureMenu",J.i18n.GT._("Structures"),"structureNone",J.i18n.GT._("Off"),"backbone",J.i18n.GT._("Backbone"),"cartoon",J.i18n.GT._("Cartoon"),"cartoonRockets",
J.i18n.GT._("Cartoon Rockets"),"ribbons",J.i18n.GT._("Ribbons"),"rockets",J.i18n.GT._("Rockets"),"strands",J.i18n.GT._("Strands"),"trace",J.i18n.GT._("Trace"),"VIBRATIONMenu",J.i18n.GT._("Vibration"),"vibrationOff",J.i18n.GT._("Off"),"vibrationOn",J.i18n.GT._("On"),"vibration20","*2","vibration05","/2","VIBRATIONvectorMenu",J.i18n.GT._("Vectors"),"spectraMenu",J.i18n.GT._("Spectra"),"hnmrMenu",J.i18n.GT._("1H-NMR"),"cnmrMenu",J.i18n.GT._("13C-NMR"),"vectorOff",J.i18n.GT._("Off"),"vectorOn",J.i18n.GT._("On"),
"vector3",J.i18n.GT.i(J.i18n.GT._("{0} pixels"),3),"vector005",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.05"),"vector01",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.10"),"vectorScale02",J.i18n.GT.o(J.i18n.GT._("Scale {0}"),"0.2"),"vectorScale05",J.i18n.GT.o(J.i18n.GT._("Scale {0}"),"0.5"),"vectorScale1",J.i18n.GT.o(J.i18n.GT._("Scale {0}"),"1"),"vectorScale2",J.i18n.GT.o(J.i18n.GT._("Scale {0}"),"2"),"vectorScale5",J.i18n.GT.o(J.i18n.GT._("Scale {0}"),"5"),"stereoMenu",J.i18n.GT._("Stereographic"),"stereoNone",
J.i18n.GT._("None"),"stereoRedCyan",J.i18n.GT._("Red+Cyan glasses"),"stereoRedBlue",J.i18n.GT._("Red+Blue glasses"),"stereoRedGreen",J.i18n.GT._("Red+Green glasses"),"stereoCrossEyed",J.i18n.GT._("Cross-eyed viewing"),"stereoWallEyed",J.i18n.GT._("Wall-eyed viewing"),"labelMenu",J.i18n.GT._("Labels"),"labelNone",J.i18n.GT._("None"),"labelSymbol",J.i18n.GT._("With Element Symbol"),"labelName",J.i18n.GT._("With Atom Name"),"labelNumber",J.i18n.GT._("With Atom Number"),"labelPositionMenu",J.i18n.GT._("Position Label on Atom"),
"labelCentered",J.i18n.GT._("Centered"),"labelUpperRight",J.i18n.GT._("Upper Right"),"labelLowerRight",J.i18n.GT._("Lower Right"),"labelUpperLeft",J.i18n.GT._("Upper Left"),"labelLowerLeft",J.i18n.GT._("Lower Left"),"colorMenu",J.i18n.GT._("Color"),"[color_atoms]Menu",J.i18n.GT._("Atoms"),"schemeMenu",J.i18n.GT._("By Scheme"),"cpk",J.i18n.GT._("Element (CPK)"),"altloc#PDB",J.i18n.GT._("Alternative Location"),"molecule",J.i18n.GT._("Molecule"),"property_vxyz#VIBRATION",J.i18n.GT._("Vectors"),"formalcharge",
J.i18n.GT._("Formal Charge"),"partialcharge#CHARGE",J.i18n.GT._("Partial Charge"),"relativeTemperature#BFACTORS",J.i18n.GT._("Temperature (Relative)"),"fixedTemperature#BFACTORS",J.i18n.GT._("Temperature (Fixed)"),"amino#PDB",J.i18n.GT._("Amino Acid"),"structure#PDB",J.i18n.GT._("Secondary Structure"),"chain#PDB",J.i18n.GT._("Chain"),"group#PDB",J.i18n.GT._("Group"),"monomer#PDB",J.i18n.GT._("Monomer"),"shapely#PDB",J.i18n.GT._("Shapely"),"none",J.i18n.GT._("Inherit"),"black",J.i18n.GT._("Black"),
"white",J.i18n.GT._("White"),"cyan",J.i18n.GT._("Cyan"),"red",J.i18n.GT._("Red"),"orange",J.i18n.GT._("Orange"),"yellow",J.i18n.GT._("Yellow"),"green",J.i18n.GT._("Green"),"blue",J.i18n.GT._("Blue"),"indigo",J.i18n.GT._("Indigo"),"violet",J.i18n.GT._("Violet"),"salmon",J.i18n.GT._("Salmon"),"olive",J.i18n.GT._("Olive"),"maroon",J.i18n.GT._("Maroon"),"gray",J.i18n.GT._("Gray"),"slateblue",J.i18n.GT._("Slate Blue"),"gold",J.i18n.GT._("Gold"),"orchid",J.i18n.GT._("Orchid"),"opaque",J.i18n.GT._("Make Opaque"),
"translucent",J.i18n.GT._("Make Translucent"),"[color_bonds]Menu",J.i18n.GT._("Bonds"),"[color_hbonds]Menu",J.i18n.GT._("Hydrogen Bonds"),"[color_ssbonds]Menu",J.i18n.GT._("Disulfide Bonds"),"colorPDBStructuresMenu",J.i18n.GT._("Structures"),"[color_backbone]Menu",J.i18n.GT._("Backbone"),"[color_trace]Menu",J.i18n.GT._("Trace"),"[color_cartoon]sMenu",J.i18n.GT._("Cartoon"),"[color_ribbon]sMenu",J.i18n.GT._("Ribbons"),"[color_rockets]Menu",J.i18n.GT._("Rockets"),"[color_strands]Menu",J.i18n.GT._("Strands"),
"[color_labels]Menu",J.i18n.GT._("Labels"),"[color_background]Menu",J.i18n.GT._("Background"),"[color_isosurface]Menu",J.i18n.GT._("Surfaces"),"[color_vectors]Menu",J.i18n.GT._("Vectors"),"[color_axes]Menu",J.i18n.GT._("Axes"),"[color_boundbox]Menu",J.i18n.GT._("Boundbox"),"[color_UNITCELL]Menu",J.i18n.GT._("Unit cell"),"zoomMenu",J.i18n.GT._("Zoom"),"zoom50","50%","zoom100","100%","zoom150","150%","zoom200","200%","zoom400","400%","zoom800","800%","zoomIn",J.i18n.GT._("Zoom In"),"zoomOut",J.i18n.GT._("Zoom Out"),
"spinMenu",J.i18n.GT._("Spin"),"spinOn",J.i18n.GT._("On"),"spinOff",J.i18n.GT._("Off"),"[set_spin_X]Menu",J.i18n.GT._("Set X Rate"),"[set_spin_Y]Menu",J.i18n.GT._("Set Y Rate"),"[set_spin_Z]Menu",J.i18n.GT._("Set Z Rate"),"[set_spin_FPS]Menu",J.i18n.GT._("Set FPS"),"s0","0","s5","5","s10","10","s20","20","s30","30","s40","40","s50","50","FRAMESanimateMenu",J.i18n.GT._("Animation"),"animModeMenu",J.i18n.GT._("Animation Mode"),"onceThrough",J.i18n.GT._("Play Once"),"palindrome",J.i18n.GT._("Palindrome"),
"loop",J.i18n.GT._("Loop"),"play",J.i18n.GT._("Play"),"pause",J.i18n.GT._("Pause"),"resume",J.i18n.GT._("Resume"),"stop",J.i18n.GT._("Stop"),"nextframe",J.i18n.GT._("Next Frame"),"prevframe",J.i18n.GT._("Previous Frame"),"rewind",J.i18n.GT._("Rewind"),"playrev",J.i18n.GT._("Reverse"),"restart",J.i18n.GT._("Restart"),"FRAMESanimFpsMenu",J.i18n.GT._("Set FPS"),"animfps5","5","animfps10","10","animfps20","20","animfps30","30","animfps50","50","measureMenu",J.i18n.GT._("Measurements"),"measureOff",J.i18n.GT._("Double-Click begins and ends all measurements"),
"measureDistance",J.i18n.GT._("Click for distance measurement"),"measureAngle",J.i18n.GT._("Click for angle measurement"),"measureTorsion",J.i18n.GT._("Click for torsion (dihedral) measurement"),"PDBmeasureSequence",J.i18n.GT._("Click two atoms to display a sequence in the console"),"measureDelete",J.i18n.GT._("Delete measurements"),"measureList",J.i18n.GT._("List measurements"),"distanceNanometers",J.i18n.GT._("Distance units nanometers"),"distanceAngstroms",J.i18n.GT._("Distance units Angstroms"),
"distancePicometers",J.i18n.GT._("Distance units picometers"),"pickingMenu",J.i18n.GT._("Set picking"),"pickOff",J.i18n.GT._("Off"),"pickCenter",J.i18n.GT._("Center"),"pickIdent",J.i18n.GT._("Identity"),"pickLabel",J.i18n.GT._("Label"),"pickAtom",J.i18n.GT._("Select atom"),"PDBpickChain",J.i18n.GT._("Select chain"),"pickElement",J.i18n.GT._("Select element"),"modelKitMode",J.i18n.GT._("modelKitMode"),"PDBpickGroup",J.i18n.GT._("Select group"),"pickMolecule",J.i18n.GT._("Select molecule"),"SYMMETRYpickSite",
J.i18n.GT._("Select site"),"SYMMETRYpickSymmetry",J.i18n.GT._("Show symmetry operation"),"pickSpin",J.i18n.GT._("Spin"),"showMenu",J.i18n.GT._("Show"),"showConsole",J.i18n.GT._("Console"),"JSConsole","JavaScript Console","showFile",J.i18n.GT._("File Contents"),"showFileHeader",J.i18n.GT._("File Header"),"showHistory",J.i18n.GT._("History"),"showIsosurface",J.i18n.GT._("Isosurface JVXL data"),"showMeasure",J.i18n.GT._("Measurements"),"showMo",J.i18n.GT._("Molecular orbital JVXL data"),"showModel",
J.i18n.GT._("Model"),"showOrient",J.i18n.GT._("Orientation"),"showSpacegroup",J.i18n.GT._("Space group"),"SYMMETRYshowSymmetry",J.i18n.GT._("Symmetry"),"showState",J.i18n.GT._("Current state"),"fileMenu",J.i18n.GT._("File"),"loadMenu",J.i18n.GT._("Load"),"saveMenu",J.i18n.GT._("Save"),"exportMenu",J.i18n.GT._("Export"),"reload",J.i18n.GT._("Reload"),"SIGNEDloadPdb",J.i18n.GT._("Open from PDB"),"SIGNEDloadFile",J.i18n.GT._("Open local file"),"SIGNEDloadUrl",J.i18n.GT._("Open URL"),"SIGNEDloadFileUnitCell",
J.i18n.GT._("Load full unit cell"),"SIGNEDloadScript",J.i18n.GT._("Open script"),"SIGNEDJAVAcaptureMenuSPECIAL",J.i18n.GT._("Capture"),"SIGNEDJAVAcaptureRock",J.i18n.GT._("Capture rock"),"SIGNEDJAVAcaptureSpin",J.i18n.GT._("Capture spin"),"SIGNEDJAVAcaptureBegin",J.i18n.GT._("Start capturing"),"SIGNEDJAVAcaptureEnd",J.i18n.GT._("End capturing"),"SIGNEDJAVAcaptureOff",J.i18n.GT._("Disable capturing"),"SIGNEDJAVAcaptureOn",J.i18n.GT._("Re-enable capturing"),"SIGNEDJAVAcaptureFpsSPECIAL",J.i18n.GT._("Set capture replay rate"),
"SIGNEDJAVAcaptureLoopingSPECIAL",J.i18n.GT._("Toggle capture looping"),"writeFileTextVARIABLE",J.i18n.GT._("Save a copy of {0}"),"writeState",J.i18n.GT._("Save script with state"),"writeHistory",J.i18n.GT._("Save script with history"),"SIGNEDNOGLwriteJpg",J.i18n.GT.o(J.i18n.GT._("Export {0} image"),"JPG"),"SIGNEDNOGLwritePng",J.i18n.GT.o(J.i18n.GT._("Export {0} image"),"PNG"),"SIGNEDNOGLwritePngJmol",J.i18n.GT.o(J.i18n.GT._("Export {0} image"),"PNG+JMOL"),"SIGNEDNOGLwriteGif",J.i18n.GT.o(J.i18n.GT._("Export {0} image"),
"GIF"),"SIGNEDNOGLwritePovray",J.i18n.GT.o(J.i18n.GT._("Export {0} image"),"POV-Ray"),"SIGNEDwriteJmol",J.i18n.GT._("Save as PNG/JMOL (image+zip)"),"SIGNEDwriteIsosurface",J.i18n.GT._("Save JVXL isosurface"),"SIGNEDNOGLwriteVrml",J.i18n.GT.o(J.i18n.GT._("Export {0} 3D model"),"VRML"),"SIGNEDNOGLwriteX3d",J.i18n.GT.o(J.i18n.GT._("Export {0} 3D model"),"X3D"),"SIGNEDNOGLwriteIdtf",J.i18n.GT.o(J.i18n.GT._("Export {0} 3D model"),"IDTF"),"SIGNEDNOGLwriteMaya",J.i18n.GT.o(J.i18n.GT._("Export {0} 3D model"),
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J.i18n.GT.o(J.i18n.GT._("Solvent-Accessible Surface (VDW + {0} Angstrom)"),"1.4"),"CHARGEsurfMEP",J.i18n.GT._("Molecular Electrostatic Potential (range ALL)"),"CHARGEsurf2MEP",J.i18n.GT._("Molecular Electrostatic Potential (range -0.1 0.1)"),"surfOpaque",J.i18n.GT._("Make Opaque"),"surfTranslucent",J.i18n.GT._("Make Translucent"),"surfOff",J.i18n.GT._("Off"),"FILEUNITMenu",J.i18n.GT._("Symmetry"),"FILEMOLload",J.i18n.GT.o(J.i18n.GT._("Reload {0}"),"(molecular)"),"FILEUNITone",J.i18n.GT.o(J.i18n.GT._("Reload {0}"),
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1),"3p",J.i18n.GT.i(J.i18n.GT._("{0} px"),3),"5p",J.i18n.GT.i(J.i18n.GT._("{0} px"),5),"10p",J.i18n.GT.i(J.i18n.GT._("{0} px"),10),"byAngstromMenu",J.i18n.GT._("Angstrom Width"),"10a",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.10"),"20a",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.20"),"25a",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.25"),"50a",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"0.50"),"100a",J.i18n.GT.o(J.i18n.GT._("{0} \u00c5"),"1.0"),"showSelectionsCB",J.i18n.GT._("Selection Halos"),"showHydrogensCB",
J.i18n.GT._("Show Hydrogens"),"showMeasurementsCB",J.i18n.GT._("Show Measurements"),"perspectiveDepthCB",J.i18n.GT._("Perspective Depth"),"showBoundBoxCB",J.i18n.GT._("Boundbox"),"showAxesCB",J.i18n.GT._("Axes"),"showUNITCELLCB",J.i18n.GT._("Unit cell"),"colorrasmolCB",J.i18n.GT._("RasMol Colors"),"aboutMenu",J.i18n.GT._("About...")];J.i18n.GT.setDoTranslate(a);return b});n(c$,"getMenuAsText",function(a){return this.getStuctureAsText(a,J.popup.MainPopupResourceBundle.menuContents,J.popup.MainPopupResourceBundle.structureContents)},
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["fileMenu","loadMenu saveMenu exportMenu SIGNEDJAVAcaptureMenuSPECIAL "],["loadMenu","SIGNEDloadFile SIGNEDloadUrl SIGNEDloadPdb SIGNEDloadScript - reload SIGNEDloadFileUnitCell"],["saveMenu","writeFileTextVARIABLE writeState writeHistory SIGNEDwriteJmol SIGNEDwriteIsosurface "],["exportMenu","SIGNEDNOGLwriteGif SIGNEDNOGLwriteJpg SIGNEDNOGLwritePng SIGNEDNOGLwritePngJmol SIGNEDNOGLwritePovray - SIGNEDNOGLwriteVrml SIGNEDNOGLwriteX3d"],["selectMenuText","hideNotSelectedCB showSelectionsCB - selectAll selectNone invertSelection - elementsComputedMenu SYMMETRYSelectComputedMenu - PDBproteinMenu PDBnucleicMenu PDBheteroMenu PDBcarboMenu PDBnoneOfTheAbove"],
["PDBproteinMenu","PDBaaResiduesComputedMenu - allProtein proteinBackbone proteinSideChains - polar nonpolar - positiveCharge negativeCharge noCharge"],["PDBcarboMenu","PDBcarboResiduesComputedMenu - allCarbo"],["PDBnucleicMenu","PDBnucleicResiduesComputedMenu - allNucleic nucleicBackbone nucleicBases - DNA RNA - atPairs auPairs gcPairs"],["PDBheteroMenu","PDBheteroComputedMenu - allHetero Solvent Water - Ligand exceptWater nonWaterSolvent"],["viewMenu","best front left right top bottom back - axisX axisY axisZ - axisA axisB axisC"],
["renderMenu","perspectiveDepthCB showBoundBoxCB showUNITCELLCB showAxesCB stereoMenu - renderSchemeMenu - atomMenu labelMenu bondMenu hbondMenu ssbondMenu - PDBstructureMenu [set_axes]Menu [set_boundbox]Menu [set_UNITCELL]Menu"],["renderSchemeMenu","renderCpkSpacefill renderBallAndStick renderSticks renderWireframe PDBrenderCartoonsOnly PDBrenderTraceOnly"],["atomMenu","showHydrogensCB - atomNone - atom15 atom20 atom25 atom50 atom75 atom100"],["bondMenu","bondNone bondWireframe - bond100 bond150 bond200 bond250 bond300"],
["hbondMenu","hbondCalc hbondNone hbondWireframe - PDBhbondSidechain PDBhbondBackbone - hbond100 hbond150 hbond200 hbond250 hbond300"],["ssbondMenu","ssbondNone ssbondWireframe - PDBssbondSidechain PDBssbondBackbone - ssbond100 ssbond150 ssbond200 ssbond250 ssbond300"],["PDBstructureMenu","structureNone - backbone cartoon cartoonRockets ribbons rockets strands trace"],["VIBRATIONvectorMenu","vectorOff vectorOn vibScale20 vibScale05 vector3 vector005 vector01 - vectorScale02 vectorScale05 vectorScale1 vectorScale2 vectorScale5"],
["stereoMenu","stereoNone stereoRedCyan stereoRedBlue stereoRedGreen stereoCrossEyed stereoWallEyed"],["labelMenu","labelNone - labelSymbol labelName labelNumber - labelPositionMenu"],["labelPositionMenu","labelCentered labelUpperRight labelLowerRight labelUpperLeft labelLowerLeft"],["colorMenu","colorrasmolCB - [color_atoms]Menu [color_bonds]Menu [color_hbonds]Menu [color_ssbonds]Menu colorPDBStructuresMenu [color_isosurface]Menu - [color_labels]Menu [color_vectors]Menu - [color_axes]Menu [color_boundbox]Menu [color_UNITCELL]Menu [color_background]Menu"],
["[color_atoms]Menu","schemeMenu - @COLOR - opaque translucent"],["[color_bonds]Menu","none - @COLOR - opaque translucent"],["[color_hbonds]Menu",null],["[color_ssbonds]Menu",null],["[color_labels]Menu",null],["[color_vectors]Menu",null],["[color_backbone]Menu","none - schemeMenu - @COLOR - opaque translucent"],["[color_cartoon]sMenu",null],["[color_ribbon]sMenu",null],["[color_rockets]Menu",null],["[color_strands]Menu",null],["[color_trace]Menu",null],["[color_background]Menu","@COLOR"],["[color_isosurface]Menu",
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"zoom50 zoom100 zoom150 zoom200 zoom400 zoom800 - zoomIn zoomOut"],["spinMenu","spinOn spinOff - [set_spin_X]Menu [set_spin_Y]Menu [set_spin_Z]Menu - [set_spin_FPS]Menu"],["VIBRATIONMenu","vibrationOff vibrationOn vibration20 vibration05 VIBRATIONvectorMenu"],["spectraMenu","hnmrMenu cnmrMenu"],["FRAMESanimateMenu","animModeMenu - play pause resume stop - nextframe prevframe rewind - playrev restart - FRAMESanimFpsMenu"],["FRAMESanimFpsMenu","animfps5 animfps10 animfps20 animfps30 animfps50"],["measureMenu",
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["SIGNEDJAVAcaptureMenuSPECIAL","SIGNEDJAVAcaptureRock SIGNEDJAVAcaptureSpin - SIGNEDJAVAcaptureBegin SIGNEDJAVAcaptureEnd SIGNEDJAVAcaptureOff SIGNEDJAVAcaptureOn SIGNEDJAVAcaptureFpsSPECIAL SIGNEDJAVAcaptureLoopingSPECIAL"],["[set_spin_X]Menu","s0 s5 s10 s20 s30 s40 s50"],["[set_spin_Y]Menu",null],["[set_spin_Z]Menu",null],["[set_spin_FPS]Menu",null],["animModeMenu","onceThrough palindrome loop"],["surfaceMenu","surfDots surfVDW surfSolventAccessible14 surfSolvent14 surfMolecular CHARGEsurf2MEP CHARGEsurfMEP surfMoComputedMenuText - surfOpaque surfTranslucent surfOff"],
["FILEUNITMenu","SYMMETRYShowComputedMenu SYMMETRYhide FILEMOLload FILEUNITone FILEUNITnine FILEUNITnineRestricted FILEUNITninePoly"],["[set_axes]Menu","off#axes dotted - byPixelMenu byAngstromMenu"],["[set_boundbox]Menu",null],["[set_UNITCELL]Menu",null],["byPixelMenu","1p 3p 5p 10p"],["byAngstromMenu","10a 20a 25a 50a 100a"],["aboutMenu","jmolMenu systemMenu"],["jmolMenu","APPLETid version date - help - mouse translations jmolorg"],["systemMenu","os javaVender javaVersion JAVAprocessors JAVAmemMax JAVAmemTotal"]];
c$.structureContents=c$.prototype.structureContents=[["jmolorg",'show url "http://www.jmol.org"'],["help","help"],["mouse",'show url "http://wiki.jmol.org/index.php/Mouse_Manual"'],["translations",'show url "http://wiki.jmol.org/index.php/Internationalisation"'],["colorrasmolCB",""],["hideNotSelectedCB","set hideNotSelected true | set hideNotSelected false; hide(none)"],["perspectiveDepthCB",""],["showAxesCB","set showAxes true | set showAxes false;set axesMolecular"],["showBoundBoxCB",""],["showHydrogensCB",
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["allCarbo","SELECT carbohydrate"],["allNucleic","SELECT nucleic"],["DNA","SELECT dna"],["RNA","SELECT rna"],["nucleicBackbone","SELECT nucleic and backbone"],["nucleicBases","SELECT nucleic and not backbone"],["atPairs","SELECT a,t"],["gcPairs","SELECT g,c"],["auPairs","SELECT a,u"],["A","SELECT a"],["C","SELECT c"],["G","SELECT g"],["T","SELECT t"],["U","SELECT u"],["allHetero","SELECT hetero"],["Solvent","SELECT solvent"],["Water","SELECT water"],["nonWaterSolvent","SELECT solvent and not water"],
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["bottom",J.popup.MainPopupResourceBundle.Box("moveto 1.0 front;moveto 2.0 bottom;delay 1")],["back",J.popup.MainPopupResourceBundle.Box("moveto 1.0 front;moveto 2.0 back;delay 1")],["axisA","moveto axis a"],["axisB","moveto axis b"],["axisC","moveto axis c"],["axisX","moveto axis x"],["axisY","moveto axis y"],["axisZ","moveto axis z"],["renderCpkSpacefill","restrict bonds not selected;select not selected;spacefill 100%;color cpk"],["renderBallAndStick","restrict bonds not selected;select not selected;spacefill 23%AUTO;wireframe 0.15;color cpk"],
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["hbond300","hbonds .3"],["ssbondNone","ssbonds off"],["ssbondWireframe","ssbonds on"],["PDBssbondSidechain","set ssbonds sidechain"],["PDBssbondBackbone","set ssbonds backbone"],["ssbond100","ssbonds .1"],["ssbond150","ssbonds .15"],["ssbond200","ssbonds .2"],["ssbond250","ssbonds .25"],["ssbond300","ssbonds .3"],["structureNone","backbone off;cartoons off;ribbons off;rockets off;strands off;trace off;"],["backbone","restrict not selected;select not selected;backbone 0.3"],["cartoon","restrict not selected;select not selected;set cartoonRockets false;cartoons on"],
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["spinOn","spin on"],["spinOff","spin off"],["s0","0"],["s5","5"],["s10","10"],["s20","20"],["s30","30"],["s40","40"],["s50","50"],["onceThrough","anim mode once#"],["palindrome","anim mode palindrome#"],["loop","anim mode loop#"],["play","anim play#"],["pause","anim pause#"],["resume","anim resume#"],["stop","anim off#"],["nextframe","frame next#"],["prevframe","frame prev#"],["playrev","anim playrev#"],["rewind","anim rewind#"],["restart","anim on#"],["animfps5","anim fps 5#"],["animfps10","anim fps 10#"],
["animfps20","anim fps 20#"],["animfps30","anim fps 30#"],["animfps50","anim fps 50#"],["measureOff","set pickingstyle MEASURE OFF; set picking OFF"],["measureDistance","set pickingstyle MEASURE; set picking MEASURE DISTANCE"],["measureAngle","set pickingstyle MEASURE; set picking MEASURE ANGLE"],["measureTorsion","set pickingstyle MEASURE; set picking MEASURE TORSION"],["PDBmeasureSequence","set pickingstyle MEASURE; set picking MEASURE SEQUENCE"],["measureDelete","measure delete"],["measureList",
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["pickMolecule","set picking molecule"],["SYMMETRYpickSite","set picking site"],["pickSpin","set picking spin"],["SYMMETRYpickSymmetry","set picking symmetry"],["showConsole","console"],["JSConsole","JSCONSOLE"],["showFile","console on;show file"],["showFileHeader","console on;getProperty FileHeader"],["showHistory","console on;show history"],["showIsosurface","console on;show isosurface"],["showMeasure","console on;show measure"],["showMo","console on;show mo"],["showModel","console on;show model"],
["showOrient","console on;show orientation"],["showSpacegroup","console on;show spacegroup"],["showState","console on;show state"],["reload",'load ""'],["SIGNEDloadPdb","load ?PdbId?"],["SIGNEDloadFile","load ?"],["SIGNEDloadUrl","load http://?"],["SIGNEDloadFileUnitCell","load ? {1 1 1}"],["SIGNEDloadScript","script ?.spt"],["SIGNEDJAVAcaptureRock","animation mode loop;capture '?Jmol.gif' rock y 10"],["SIGNEDJAVAcaptureSpin","animation mode loop;capture '?Jmol.gif' spin y"],["SIGNEDJAVAcaptureBegin",
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["writeState",'if (_applet && !_signedApplet) { console;show state } else { write state "?FILEROOT?.spt"}'],["writeHistory",'if (_applet && !_signedApplet) { console;show history } else { write history "?FILEROOT?.his"}'],["SIGNEDwriteJmol",'write PNGJ "?FILEROOT?.png"'],["SIGNEDwriteIsosurface",'write isosurface "?FILEROOT?.jvxl"'],["SIGNEDNOGLwriteGif",'write image "?FILEROOT?.gif"'],["SIGNEDNOGLwriteJpg",'write image "?FILEROOT?.jpg"'],["SIGNEDNOGLwritePng",'write image "?FILEROOT?.png"'],["SIGNEDNOGLwritePngJmol",
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["surfDots","dots on"],["surfVDW","isosurface delete resolution 0 solvent 0 translucent"],["surfMolecular","isosurface delete resolution 0 molecular translucent"],["surfSolvent14","isosurface delete resolution 0 solvent 1.4 translucent"],["surfSolventAccessible14","isosurface delete resolution 0 sasurface 1.4 translucent"],["CHARGEsurfMEP","isosurface delete resolution 0 vdw color range all map MEP translucent"],["CHARGEsurf2MEP","isosurface delete resolution 0 vdw color range -0.1 0.1 map MEP translucent"],
["surfOpaque","mo opaque;isosurface opaque"],["surfTranslucent","mo translucent;isosurface translucent"],["surfOff","mo delete;isosurface delete;select *;dots off"],["SYMMETRYhide","draw sym_* delete"],["FILEMOLload",'save orientation;load "";restore orientation;center'],["FILEUNITone",'save orientation;load "" {1 1 1} ;restore orientation;center'],["FILEUNITnine",'save orientation;load "" {444 666 1} ;restore orientation;center'],["FILEUNITnineRestricted",'save orientation;load "" {444 666 1} ;restore orientation; unitcell on; display cell=555;center visible;zoom 200'],
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this.vwr.am.cmi;this.modelCount=this.vwr.getModelCount();this.ac=this.vwr.getAtomCountInModel(this.modelIndex);this.modelSetInfo=this.vwr.getModelSetAuxiliaryInfo();this.modelInfo=this.vwr.getModelAuxiliaryInfo(this.modelIndex);null==this.modelInfo&&(this.modelInfo=new java.util.Hashtable);this.isPDB=this.checkBoolean("isPDB");this.isMultiFrame=1<this.modelCount;this.isSymmetry=this.checkBoolean("hasSymmetry");this.isUnitCell=this.modelInfo.containsKey("notionalUnitcell");this.fileHasUnitCell=this.isPDB&&
this.isUnitCell||this.checkBoolean("fileHasUnitCell");this.isLastFrame=this.modelIndex==this.modelCount-1;this.altlocs=this.vwr.getAltLocListInModel(this.modelIndex);this.isMultiConfiguration=0<this.altlocs.length;this.isVibration=this.vwr.modelHasVibrationVectors(this.modelIndex);this.haveCharges=this.vwr.havePartialCharges();this.haveBFactors=this.vwr.getBooleanProperty("haveBFactors");this.cnmrPeaks=this.modelInfo.get("jdxAtomSelect_13CNMR");this.hnmrPeaks=this.modelInfo.get("jdxAtomSelect_1HNMR")});
n(c$,"appCheckSpecialMenu",function(a,b,c){"modelSetMenu".equals(a)&&(this.nullModelSetName=c,this.menuEnable(b,!1))},"~S,javajs.api.SC,~S");n(c$,"appUpdateForShow",function(){if(-1!=this.updateMode){this.isTainted=!0;this.getViewerData();this.updateMode=2;this.updateSelectMenu();this.updateSpectraMenu();this.updateFRAMESbyModelComputedMenu();this.updateSceneComputedMenu();this.updateModelSetComputedMenu();this.updateAboutSubmenu();for(var a=this.Special.size();0<=--a;)this.updateSpecialMenuItem(this.Special.get(a))}});
m(c$,"updateFileMenu",function(){var a=this.htMenus.get("fileMenu");if(null!=a){var b=this.getMenuText("writeFileTextVARIABLE"),a=this.htMenus.get("writeFileTextVARIABLE");this.modelSetFileName.equals("zapped")||this.modelSetFileName.equals("")?(this.menuSetLabel(a,""),this.menuEnable(a,!1)):(this.menuSetLabel(a,J.i18n.GT.o(J.i18n.GT._(b),this.modelSetFileName)),this.menuEnable(a,!0))}});m(c$,"getMenuText",function(a){var b=this.menuText.getProperty(a);return null==b?a:b},"~S");m(c$,"updateSelectMenu",
function(){var a=this.htMenus.get("selectMenuText");null!=a&&(this.menuEnable(a,0!=this.ac),this.menuSetLabel(a,this.gti("selectMenuText",this.vwr.getSelectionCount())))});m(c$,"updateElementsComputedMenu",function(a){var b=this.htMenus.get("elementsComputedMenu");if(null!=b&&(this.menuRemoveAll(b,0),this.menuEnable(b,!1),null!=a)){for(var c=a.nextSetBit(0);0<=c;c=a.nextSetBit(c+1)){var d=JU.Elements.elementNameFromNumber(c),e=JU.Elements.elementSymbolFromNumber(c),e=e+" - "+d;this.menuCreateItem(b,
e,"SELECT "+d,null)}for(c=4;c<JU.Elements.altElementMax;++c)e=JU.Elements.elementNumberMax+c,a.get(e)&&(e=JU.Elements.altElementNumberFromIndex(c),d=JU.Elements.elementNameFromNumber(e),e=JU.Elements.elementSymbolFromNumber(e),e=e+" - "+d,this.menuCreateItem(b,e,"SELECT "+d,null));this.menuEnable(b,!0)}},"JU.BS");m(c$,"updateSpectraMenu",function(){var a=this.htMenus.get("hnmrMenu"),b=this.htMenus.get("cnmrMenu");null!=a&&this.menuRemoveAll(a,0);null!=b&&this.menuRemoveAll(b,0);var c=this.htMenus.get("spectraMenu");
if(null!=c){this.menuRemoveAll(c,0);var d=(new Boolean(this.setSpectraMenu(a,this.hnmrPeaks)|this.setSpectraMenu(b,this.cnmrPeaks))).valueOf();d&&(null!=a&&this.menuAddSubMenu(c,a),null!=b&&this.menuAddSubMenu(c,b));this.menuEnable(c,d)}});m(c$,"setSpectraMenu",function(a,b){if(null==a)return!1;this.menuEnable(a,!1);var c=null==b?0:b.size();if(0==c)return!1;for(var d=0;d<c;d++){var e=b.get(d),f=JU.PT.getQuotedAttribute(e,"title"),e=JU.PT.getQuotedAttribute(e,"atoms");null!=e&&this.menuCreateItem(a,
f,"select visible & (@"+JU.PT.rep(e,","," or @")+")","Focus"+d)}this.menuEnable(a,!0);return!0},"javajs.api.SC,JU.Lst");m(c$,"updateHeteroComputedMenu",function(a){var b=this.htMenus.get("PDBheteroComputedMenu");if(null!=b&&(this.menuRemoveAll(b,0),this.menuEnable(b,!1),null!=a)){var c=0,d;for(a=a.entrySet().iterator();a.hasNext()&&((d=a.next())||1);){var e=d.getKey(),f=d.getValue();20<f.length&&(f=f.substring(0,20)+"...");this.menuCreateItem(b,e+" - "+f,"SELECT ["+e+"]",null);c++}this.menuEnable(b,
0<c)}},"java.util.Map");m(c$,"updateSurfMoComputedMenu",function(a){var b=this.htMenus.get("surfMoComputedMenuText");if(null!=b){this.menuRemoveAll(b,0);a=null==a?null:a.get("mos");var c=null==a?0:a.size(),d=this.getMenuText("surfMoComputedMenuText");if(0==c)this.menuSetLabel(b,J.i18n.GT.o(J.i18n.GT._(d),"")),this.menuEnable(b,!1);else{this.menuSetLabel(b,J.i18n.GT.i(J.i18n.GT._(d),c));this.menuEnable(b,!0);var d=b,e=c%this.itemMax;0==e&&(e=this.itemMax);for(var f=c>this.itemMax?0:-2147483648;0<=
--c;){0<=f&&0==f++%e&&(f==e+1&&(e=this.itemMax),f="mo"+f+"Menu",d=this.menuNewSubMenu(Math.max(c+2-e,1)+"..."+(c+1),this.menuGetId(b)+"."+f),this.menuAddSubMenu(b,d),this.htMenus.put(f,d),f=1);var g=a.get(c),g="#"+(c+1)+" "+(g.containsKey("type")?g.get("type")+" ":"")+(g.containsKey("symmetry")?g.get("symmetry")+" ":"")+(g.containsKey("occupancy")?"("+g.get("occupancy").intValue()+") ":"")+(g.containsKey("energy")?g.get("energy"):"");this.menuCreateItem(d,g,"mo "+(c+1),null)}}}},"java.util.Map");
m(c$,"updateFileTypeDependentMenus",function(){for(var a=this.NotPDB.size();0<=--a;)this.menuEnable(this.NotPDB.get(a),!this.isPDB);for(a=this.PDBOnly.size();0<=--a;)this.menuEnable(this.PDBOnly.get(a),this.isPDB);for(a=this.UnitcellOnly.size();0<=--a;)this.menuEnable(this.UnitcellOnly.get(a),this.isUnitCell);for(a=this.FileUnitOnly.size();0<=--a;)this.menuEnable(this.FileUnitOnly.get(a),this.isUnitCell||this.fileHasUnitCell);for(a=this.FileMolOnly.size();0<=--a;)this.menuEnable(this.FileMolOnly.get(a),
this.isUnitCell||this.fileHasUnitCell);for(a=this.SingleModelOnly.size();0<=--a;)this.menuEnable(this.SingleModelOnly.get(a),this.isLastFrame);for(a=this.FramesOnly.size();0<=--a;)this.menuEnable(this.FramesOnly.get(a),this.isMultiFrame);for(a=this.VibrationOnly.size();0<=--a;)this.menuEnable(this.VibrationOnly.get(a),this.isVibration);for(a=this.SymmetryOnly.size();0<=--a;)this.menuEnable(this.SymmetryOnly.get(a),this.isSymmetry&&this.isUnitCell);for(a=this.ChargesOnly.size();0<=--a;)this.menuEnable(this.ChargesOnly.get(a),
this.haveCharges);for(a=this.TemperatureOnly.size();0<=--a;)this.menuEnable(this.TemperatureOnly.get(a),this.haveBFactors);this.updateSignedAppletItems()});m(c$,"updateSceneComputedMenu",function(){var a=this.htMenus.get("sceneComputedMenu");if(null!=a){this.menuRemoveAll(a,0);this.menuEnable(a,!1);var b=this.vwr.getSceneList();if(null!=b){for(var c=0;c<b.length;c++)this.menuCreateItem(a,b[c],"restore scene "+JU.PT.esc(b[c])+" 1.0",null);this.menuEnable(a,!0)}}});m(c$,"updatePDBComputedMenus",function(){var a=
this.htMenus.get("PDBaaResiduesComputedMenu");if(null!=a){this.menuRemoveAll(a,0);this.menuEnable(a,!1);var b=this.htMenus.get("PDBnucleicResiduesComputedMenu");if(null!=b){this.menuRemoveAll(b,0);this.menuEnable(b,!1);var c=this.htMenus.get("PDBcarboResiduesComputedMenu");if(null!=c&&(this.menuRemoveAll(c,0),this.menuEnable(c,!1),null!=this.modelSetInfo)){var d=0>this.modelIndex?0:this.modelIndex+1,e=this.modelSetInfo.get("group3Lists");this.group3List=null==e?null:e[d];this.group3Counts=null==e?
null:this.modelSetInfo.get("group3Counts")[d];if(null!=this.group3List){d=0;for(e=1;24>e;++e)d+=this.updateGroup3List(a,JV.JC.predefinedGroup3Names[e]);d+=this.augmentGroup3List(a,"p>",!0);this.menuEnable(a,0<d);this.menuEnable(this.htMenus.get("PDBproteinMenu"),0<d);d=this.augmentGroup3List(b,"n>",!1);this.menuEnable(b,0<d);this.menuEnable(this.htMenus.get("PDBnucleicMenu"),0<d);d=this.augmentGroup3List(c,"c>",!1);this.menuEnable(c,0<d);this.menuEnable(this.htMenus.get("PDBcarboMenu"),0<d)}}}}});
m(c$,"updateGroup3List",function(a,b){var c=0,d=this.group3Counts[L(this.group3List.indexOf(b)/6)],e=null;0<d&&(e="SELECT "+b,b+="  ("+d+")",c++);e=this.menuCreateItem(a,b,e,this.menuGetId(a)+"."+b);0==d&&this.menuEnable(e,!1);return c},"javajs.api.SC,~S");m(c$,"augmentGroup3List",function(a,b,c){for(var d=138,e=0;;){d=this.group3List.indexOf(b,d);if(0>d)break;0==e++&&c&&this.menuAddSeparator(a);var f=this.group3Counts[L(d/6)],g=this.group3List.substring(d+2,d+5),f=g+"  ("+f+")";this.menuCreateItem(a,
f,"SELECT ["+g+"]",this.menuGetId(a)+"."+f);d++}return e},"javajs.api.SC,~S,~B");m(c$,"updateSYMMETRYComputedMenus",function(){this.updateSYMMETRYSelectComputedMenu();this.updateSYMMETRYShowComputedMenu()});m(c$,"updateSYMMETRYShowComputedMenu",function(){var a=this.htMenus.get("SYMMETRYShowComputedMenu");if(null!=a&&(this.menuRemoveAll(a,0),this.menuEnable(a,!1),this.isSymmetry&&!(0>this.modelIndex))){var b=this.vwr.getProperty("DATA_API","spaceGroupInfo",null);if(null!=b){var c=b.get("operations");
if(null!=c){b=b.get("spaceGroupName");this.menuSetLabel(a,null==b?J.i18n.GT._("Space Group"):b);for(var b=a,d=this.itemMax,e=c.length>this.itemMax?0:-2147483648,f=0;f<c.length;f++){0<=e&&0==e++%d&&(e="drawsymop"+e+"Menu",b=this.menuNewSubMenu(f+1+"..."+Math.min(f+this.itemMax,c.length),this.menuGetId(a)+"."+e),this.menuAddSubMenu(a,b),this.htMenus.put(e,b),e=1);var g=c[f][1];0>g.indexOf("x1")&&(g=c[f][0]);this.menuEnable(this.menuCreateItem(b,f+1+" "+c[f][2]+" ("+g+")","draw SYMOP "+(f+1),null),!0)}this.menuEnable(a,
!0)}}}});m(c$,"updateSYMMETRYSelectComputedMenu",function(){var a=this.htMenus.get("SYMMETRYSelectComputedMenu");if(null!=a&&(this.menuRemoveAll(a,0),this.menuEnable(a,!1),this.isSymmetry&&!(0>this.modelIndex))){var b=this.modelInfo.get("symmetryOperations");if(null!=b){for(var c=null!=this.modelInfo.get("unitCellRange"),d=a,e=this.itemMax,f=b.length>this.itemMax?0:-2147483648,g=0;g<b.length;g++)0<=f&&0==f++%e&&(f="symop"+f+"Menu",d=this.menuNewSubMenu(g+1+"..."+Math.min(g+this.itemMax,b.length),
this.menuGetId(a)+"."+f),this.menuAddSubMenu(a,d),this.htMenus.put(f,d),f=1),this.menuEnable(this.menuCreateItem(d,"symop="+(g+1)+" # "+b[g],"SELECT symop="+(g+1),null),c);this.menuEnable(a,!0)}}});m(c$,"updateFRAMESbyModelComputedMenu",function(){var a=this.htMenus.get("FRAMESbyModelComputedMenu");if(null!=a&&(this.menuEnable(a,0<this.modelCount),this.menuSetLabel(a,0>this.modelIndex?this.gti("allModelsText",this.modelCount):this.gto("modelMenuText",this.modelIndex+1+"/"+this.modelCount)),this.menuRemoveAll(a,
0),!(1>this.modelCount))){1<this.modelCount&&this.menuCreateCheckboxItem(a,J.i18n.GT._("All"),"frame 0 ##",null,0>this.modelIndex,!1);for(var b=a,c=this.itemMax,d=this.modelCount>this.itemMax?0:-2147483648,e=0;e<this.modelCount;e++){0<=d&&0==d++%c&&(d="model"+d+"Menu",b=this.menuNewSubMenu(e+1+"..."+Math.min(e+this.itemMax,this.modelCount),this.menuGetId(a)+"."+d),this.menuAddSubMenu(a,b),this.htMenus.put(d,b),d=1);var f=""+this.vwr.getModelNumberDotted(e),g=this.vwr.getModelName(e),h=this.vwr.getModelAuxiliaryInfoValue(e,
"spectrumTypes");null!=h&&g.startsWith(h)&&(h=null);if(!g.equals(f)){var j=g.indexOf(";PATH");0<=j&&(g=g.substring(0,j));if(0==g.indexOf("Model[")&&0<=(j=g.indexOf("]:")))g=g.substring(j+2);g=f+": "+g}60<g.length&&(g=g.substring(0,55)+"...");null!=h&&(g+=" ("+h+")");this.menuCreateCheckboxItem(b,g,"model "+f+" ##",null,this.modelIndex==e,!1)}}});m(c$,"updateConfigurationComputedMenu",function(){var a=this.htMenus.get("configurationComputedMenu");if(null!=a&&(this.menuEnable(a,this.isMultiConfiguration),
this.isMultiConfiguration)){var b=this.altlocs.length;this.menuSetLabel(a,this.gti("configurationMenuText",b));this.menuRemoveAll(a,0);var c="hide none ##CONFIG";this.menuCreateCheckboxItem(a,J.i18n.GT._("All"),c,null,1==this.updateMode&&this.configurationSelected.equals(c),!1);for(var d=0;d<b;d++){var c="configuration "+(d+1)+"; hide thisModel and not selected ##CONFIG",e=""+(d+1)+' -- "'+this.altlocs.charAt(d)+'"';this.menuCreateCheckboxItem(a,e,c,null,1==this.updateMode&&this.configurationSelected.equals(c),
!1)}}});m(c$,"updateModelSetComputedMenu",function(){var a=this.htMenus.get("modelSetMenu");if(null!=a){this.menuRemoveAll(a,0);this.menuSetLabel(a,this.nullModelSetName);this.menuEnable(a,!1);for(var b=this.noZapped.length;0<=--b;)this.menuEnable(this.htMenus.get(this.noZapped[b]),!this.isZapped);if(!(null==this.modelSetName||this.isZapped)){this.isMultiFrame?(this.modelSetName=this.gti("modelSetCollectionText",this.modelCount),this.modelSetName.length>this.titleWidthMax&&(this.modelSetName=this.modelSetName.substring(0,
this.titleWidthMax)+"...")):this.vwr.getBooleanProperty("hideNameInPopup")?this.modelSetName=this.getMenuText("hiddenModelSetText"):this.modelSetName.length>this.titleWidthMax&&(this.modelSetName=this.modelSetName.substring(0,this.titleWidthMax)+"...");this.menuSetLabel(a,this.modelSetName);this.menuEnable(a,!0);this.menuEnable(this.htMenus.get("computationMenu"),100>=this.ac);this.addMenuItem(a,this.gti("atomsText",this.ac));this.addMenuItem(a,this.gti("bondsText",this.vwr.getBondCountInModel(this.modelIndex)));
if(this.isPDB){this.menuAddSeparator(a);this.addMenuItem(a,this.gti("groupsText",this.vwr.getGroupCountInModel(this.modelIndex)));this.addMenuItem(a,this.gti("chainsText",this.vwr.getChainCountInModel(this.modelIndex)));this.addMenuItem(a,this.gti("polymersText",this.vwr.getPolymerCountInModel(this.modelIndex)));var c=this.htMenus.get("BiomoleculesMenu");null==c&&(c=this.menuNewSubMenu(J.i18n.GT._(this.getMenuText("biomoleculesMenuText")),this.menuGetId(a)+".biomolecules"),this.menuAddSubMenu(a,c));
this.menuRemoveAll(c,0);this.menuEnable(c,!1);var d;if(0<=this.modelIndex&&null!=(d=this.vwr.getModelAuxiliaryInfoValue(this.modelIndex,"biomolecules"))){this.menuEnable(c,!0);for(var e=d.size(),b=0;b<e;b++){var f=this.isMultiFrame?"":'save orientation;load "" FILTER "biomolecule '+(b+1)+'";restore orientation;',g=d.get(b).get("atomCount").intValue(),g=this.gto(this.isMultiFrame?"biomoleculeText":"loadBiomoleculeText",[Integer.$valueOf(b+1),Integer.$valueOf(g)]);this.menuCreateItem(c,g,f,null)}}}this.isApplet&&
!this.vwr.getBooleanProperty("hideNameInPopup")&&(this.menuAddSeparator(a),this.menuCreateItem(a,this.gto("viewMenuText",this.modelSetFileName),"show url",null))}}});m(c$,"gti",function(a,b){return J.i18n.GT.i(J.i18n.GT._(this.getMenuText(a)),b)},"~S,~N");m(c$,"gto",function(a,b){return J.i18n.GT.o(J.i18n.GT._(this.getMenuText(a)),b)},"~S,~O");m(c$,"updateAboutSubmenu",function(){this.isApplet&&this.setText("APPLETid",this.vwr.appletName)});m(c$,"updateLanguageSubmenu",function(){var a=this.htMenus.get("languageComputedMenu");
if(null!=a){this.menuRemoveAll(a,0);for(var b=J.i18n.GT.getLanguage(),c=this.menuGetId(a),d=J.i18n.GT.getLanguageList(null),e=0,f=0;e<d.length;e++)if(b.equals(d[e].code)&&(d[e].display=!0),d[e].display){var g=d[e].code,h=d[e].language,j=d[e].nativeLanguage,k=g+" - "+J.i18n.GT._(h);null!=j&&!j.equals(J.i18n.GT._(h))&&(k+=" - "+j);0<f++&&1==f%4&&this.menuAddSeparator(a);this.menuCreateCheckboxItem(a,k,'language = "'+g+'" ##'+h,c+"."+g,b.equals(g),!1)}}});m(c$,"updateSpecialMenuItem",function(a){a.setText(this.getSpecialLabel(a.getName(),
a.getText()))},"javajs.api.SC");m(c$,"getSpecialLabel",function(a,b){var c=b.indexOf(" (");0>c&&(c=b.length);var d=null;0<=a.indexOf("captureLooping")?d=this.vwr.am.animationReplayMode.name().equals("ONCE")?"ONCE":"LOOP":0<=a.indexOf("captureFps")?d=""+this.vwr.getInt(553648132):0<=a.indexOf("captureMenu")&&(d=null==this.vwr.captureParams?J.i18n.GT._("not capturing"):this.vwr.getFilePath(this.vwr.captureParams.get("captureFileName"),!0)+" "+this.vwr.captureParams.get("captureCount"));return null==
d?b:b.substring(0,c)+" ("+d+")"},"~S,~S");M(c$,"UPDATE_NEVER",-1,"UPDATE_ALL",0,"UPDATE_CONFIG",1,"UPDATE_SHOW",2,"MENUITEM_HEIGHT",20)});y("J.awtjs2d");B(["J.popup.JmolGenericPopup"],"J.awtjs2d.JmolJSPopup",["J.i18n.GT","J.popup.JSSwingPopupHelper","$.MainPopupResourceBundle"],function(){c$=N(J.awtjs2d,"JmolJSPopup",J.popup.JmolGenericPopup);ca(c$,function(){fa(this,J.awtjs2d.JmolJSPopup,[]);this.helper=new J.popup.JSSwingPopupHelper(this)});n(c$,"jpiInitialize",function(a,b){var c=J.i18n.GT.setDoTranslate(!0),
d=new J.popup.MainPopupResourceBundle(this.strMenuStructure=b,this.menuText);this.initialize(a,d,d.getMenuName());J.i18n.GT.setDoTranslate(c)},"javajs.api.PlatformViewer,~S");n(c$,"menuShowPopup",function(a,b,c){try{a.show(this.isTainted?this.vwr.getHtml5Applet():null,b,c)}catch(d){if(!da(d,Exception))throw d;}this.isTainted=!1},"javajs.api.SC,~N,~N");n(c$,"menuSetCheckBoxOption",function(){return null},"javajs.api.SC,~S,~S");n(c$,"getImageIcon",function(){return null},"~S");n(c$,"menuFocusCallback",
function(){},"~S,~S,~B")})})(Clazz,Clazz.newLongArray,Clazz.doubleToByte,Clazz.doubleToInt,Clazz.doubleToLong,Clazz.declarePackage,Clazz.instanceOf,Clazz.load,Clazz.instantialize,Clazz.decorateAsClass,Clazz.floatToInt,Clazz.makeConstructor,Clazz.defineEnumConstant,Clazz.exceptionOf,Clazz.newIntArray,Clazz.defineStatics,Clazz.newFloatArray,Clazz.declareType,Clazz.prepareFields,Clazz.superConstructor,Clazz.newByteArray,Clazz.declareInterface,Clazz.p0p,Clazz.pu$h,Clazz.newShortArray,Clazz.innerTypeInstance,
Clazz.isClassDefined,Clazz.prepareCallback,Clazz.newArray,Clazz.castNullAs,Clazz.floatToShort,Clazz.superCall,Clazz.decorateAsType,Clazz.newBooleanArray,Clazz.newCharArray,Clazz.implementOf,Clazz.newDoubleArray,Clazz.overrideConstructor,Clazz.clone,Clazz.doubleToShort,Clazz.getInheritedLevel,Clazz.getParamsType,Clazz.isAF,Clazz.isAI,Clazz.isAS,Clazz.isASS,Clazz.isAP,Clazz.isAFloat,Clazz.isAII,Clazz.isAFF,Clazz.isAFFF,Clazz.tryToSearchAndExecute,Clazz.getStackTrace,Clazz.inheritArgs,Clazz.alert,Clazz.defineMethod,
Clazz.overrideMethod,Clazz.declareAnonymous,Clazz.cloneFinals);