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(this.m10*this.m22-this.m12*this.m20)+this.m00*(this.m12*this.m23-this.m13*this.m22),this.m13*(this.m20*this.m31-this.m21*this.m30)+this.m10*(this.m21*this.m33-this.m23*this.m31)+this.m11*(this.m23*this.m30-this.m20*this.m33),this.m23*(this.m00*this.m31-this.m01*this.m30)+this.m20*(this.m01*this.m33-this.m03*this.m31)+this.m21*(this.m03*this.m30-this.m00*this.m33),this.m33*(this.m00*this.m11-this.m01*this.m10)+this.m30*(this.m01*this.m13-this.m03*this.m11)+this.m31*(this.m03*this.m10-this.m00*this.m13),
this.m03*(this.m11*this.m20-this.m10*this.m21)+this.m00*(this.m13*this.m21-this.m11*this.m23)+this.m01*(this.m10*this.m23-this.m13*this.m20),this.m10*(this.m22*this.m31-this.m21*this.m32)+this.m11*(this.m20*this.m32-this.m22*this.m30)+this.m12*(this.m21*this.m30-this.m20*this.m31),this.m20*(this.m02*this.m31-this.m01*this.m32)+this.m21*(this.m00*this.m32-this.m02*this.m30)+this.m22*(this.m01*this.m30-this.m00*this.m31),this.m30*(this.m02*this.m11-this.m01*this.m12)+this.m31*(this.m00*this.m12-this.m02*
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"determinant4",function(){return(this.m00*this.m11-this.m01*this.m10)*(this.m22*this.m33-this.m23*this.m32)-(this.m00*this.m12-this.m02*this.m10)*(this.m21*this.m33-this.m23*this.m31)+(this.m00*this.m13-this.m03*this.m10)*(this.m21*this.m32-this.m22*this.m31)+(this.m01*this.m12-this.m02*this.m11)*(this.m20*this.m33-this.m23*this.m30)-(this.m01*this.m13-this.m03*this.m11)*(this.m20*this.m32-this.m22*this.m30)+(this.m02*this.m13-this.m03*this.m12)*(this.m20*this.m31-this.m21*this.m30)});c(c$,"scale",
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"]\n  ["+this.m20+"\t"+this.m21+"\t"+this.m22+"\t"+this.m23+"]\n  ["+this.m30+"\t"+this.m31+"\t"+this.m32+"\t"+this.m33+"] ]"})}),k("JU"),t(["java.io.OutputStream"],"JU.OC","java.io.BufferedWriter $.ByteArrayOutputStream $.FileOutputStream $.OutputStreamWriter JU.Base64 $.SB".split(" "),function(){c$=q(function(){this.bw=this.fileName=this.bytePoster=null;this.isLocalFile=!1;this.byteCount=0;this.closed=this.isCanceled=!1;this.type=this.sb=this.os=null;this.$isBase64=!1;this.bytes=this.os0=null;n(this,
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c$.getMinX=c(c$,"getMinX",function(a,b,d){for(var c=1.7976931348623157E308;b<d;b++){var g=a[b].getXVal();g<c&&(c=g)}return c},"~A,~N,~N");c$.getMinX=c(c$,"getMinX",function(a,b){for(var d=1.7976931348623157E308,c=0;c<a.size();c++){var g=a.get(c).getXYCoords(),g=JSV.common.Coordinate.getMinX(g,b.getStartingPointIndex(c),b.getEndingPointIndex(c));g<d&&(d=g)}return d},"JU.Lst,JSV.common.ViewData");c$.getMaxX=c(c$,"getMaxX",function(a,b,d){for(var c=-1.7976931348623157E308;b<d;b++){var g=a[b].getXVal();
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b){b&&this.isSplittable?(this.nSplit=this.nSpectra,this.showAllStacked=!1,this.setSpectrumClicked(this.iSpectrumSelected),this.pd.currentSplitPoint=this.iSpectrumSelected):(this.nSplit=1,this.showAllStacked=this.allowStacking&&!b,this.setSpectrumClicked(this.iSpectrumSelected));this.stackSelected=!1;JSV.common.GraphSet.setFractionalPositions(this.pd,a,JSV.common.PanelData.LinkMode.NONE)},"JU.Lst,~B");c(c$,"setPositionForFrame",function(a){0>a&&(a=0);var b=this.height-50;this.xPixel00=w(this.width*
this.fX0);this.xPixel11=w(this.xPixel00+this.width*this.fracX-1);this.xHArrows=this.xPixel00+25;this.xVArrows=this.xPixel11-w(this.right/2);this.xPixel0=this.xPixel00+w(this.left*(1-this.fX0));this.xPixel10=this.xPixel1=this.xPixel11-this.right;this.xPixels0=this.xPixels=this.xPixel1-this.xPixel0+1;this.yPixel000=(0==this.fY0?25:0)+w(this.height*this.fY0);this.yPixel00=this.yPixel000+w(b*this.fracY*a);this.yPixel11=this.yPixel00+w(b*this.fracY)-1;this.yHArrows=this.yPixel11-12;this.yPixel0=this.yPixel00+
w(this.top/2);this.yPixel1=this.yPixel11-w(this.bottom/2);this.yPixels=this.yPixel1-this.yPixel0+1;null!=this.imageView&&this.is2DSpectrum&&(this.setImageWindow(),this.pd.display1D?(this.xPixels=w(Math.floor(0.8*(this.pd.display1D?1*(this.xPixels0-this.imageView.xPixels)/this.xPixels0:1)*this.xPixels0)),this.xPixel1=this.xPixel0+this.xPixels-1):(this.xPixels=0,this.xPixel1=this.imageView.xPixel0-30))},"~N");c(c$,"hasPoint",function(a,b){return a>=this.xPixel00&&a<=this.xPixel11&&b>=this.yPixel000&&
b<=this.yPixel11*this.nSplit},"~N,~N");c(c$,"isInPlotRegion",function(a,b){return a>=this.xPixel0&&a<=this.xPixel1&&b>=this.yPixel0&&b<=this.yPixel1},"~N,~N");c(c$,"getSplitPoint",function(a){return Math.max(0,Math.min(w((a-this.yPixel000)/(this.yPixel11-this.yPixel00)),this.nSplit-1))},"~N");c(c$,"isSplitWidget",function(a,b){return this.isSplittable&&a>=this.xPixel11-20&&b>=this.yPixel00+1&&a<=this.xPixel11-10&&b<=this.yPixel00+11},"~N,~N");c(c$,"initGraphSet",function(a,b){null==JSV.common.GraphSet.veryLightGrey&&
(JSV.common.GraphSet.veryLightGrey=this.g2d.getColor3(200,200,200));this.setPlotColors(JSV.common.ColorParameters.defaultPlotColors);this.xAxisLeftToRight=this.getSpectrumAt(0).shouldDisplayXAxisIncreasing();this.setDrawXAxis();var d=G(this.nSpectra,0),c=G(this.nSpectra,0);this.bsSelected.setBits(0,this.nSpectra);this.allowStackedYScale=!0;0>=b&&(b=2147483647);this.isSplittable=1<this.nSpectra;this.showAllStacked=(this.allowStacking=this.spectra.get(0).isStackable())&&1<this.nSpectra;for(var g=0;g<
this.nSpectra;g++){var e=this.spectra.get(g).getXYCoords().length-1;d[g]=JSV.common.Coordinate.intoRange(a,0,e);c[g]=JSV.common.Coordinate.intoRange(b,0,e);this.allowStackedYScale=(new Boolean(this.allowStackedYScale&(this.spectra.get(g).getYUnits().equals(this.spectra.get(0).getYUnits())&&this.spectra.get(g).getUserYFactor()==this.spectra.get(0).getUserYFactor()))).valueOf()}this.getView(0,0,0,0,d,c,null,null);this.viewList=new JU.Lst;this.viewList.addLast(this.viewData)},"~N,~N");c(c$,"getView",
function(a,b,d,c,g,e,l,j){var m=0==this.graphsTemp.size()?this.spectra:this.graphsTemp,v=this.getSpectrumAt(0).getSubSpectra(),p=null==v||2==v.size()&&v.get(1).isImaginary(),n=!this.getSpectrumAt(0).is1D();p&&d==c?m=this.spectra:d==c&&(this.viewData=new JSV.common.ViewData(v,d,c,this.getSpectrum().isContinuous()),m=null);null!=m&&(this.viewData=new JSV.common.ViewData(m,d,c,g,e,this.getSpectrumAt(0).isContinuous(),n),a!=b&&this.getScale().setXRange(a,b));null!=l&&(JSV.common.ScaleData.copyScaleFactors(l,
this.viewData.getScaleData()),null!=j&&JSV.common.ScaleData.copyYScales(j,this.viewData.getScaleData()),this.getCurrentView())},"~N,~N,~N,~N,~A,~A,~A,~A");c(c$,"isNearby",function(a,b,d,c){var g=a.getXVal(),e=d.toPixelX(g);a=this.toPixelY(a.getYVal());g=b.getXVal();d=d.toPixelX(g);b=this.toPixelY(b.getYVal());return Math.abs(e-d)+Math.abs(a-b)<c},"JSV.common.Coordinate,JSV.common.Coordinate,JSV.common.XYScaleConverter,~N");c(c$,"setReversePlot",function(a){(this.reversePlot=a)&&this.closeDialogsExcept(JSV.common.Annotation.AType.NONE);
this.setDrawXAxis()},"~B");c(c$,"setDrawXAxis",function(){this.drawXAxisLeftToRight=(new Boolean(this.xAxisLeftToRight^this.reversePlot)).valueOf();for(var a=0;a<this.spectra.size();a++)this.spectra.get(a).setExportXAxisDirection(this.drawXAxisLeftToRight)});c(c$,"isInTopBar",function(a,b){return a==this.fixX(a)&&b>this.pin1Dx0.yPixel0-2&&b<this.pin1Dx0.yPixel1},"~N,~N");c(c$,"isInTopBar2D",function(a,b){return null!=this.imageView&&a==this.imageView.fixX(a)&&b>this.pin2Dx0.yPixel0-2&&b<this.pin2Dx0.yPixel1},
"~N,~N");c(c$,"isInRightBar",function(a,b){return b==this.fixY(b)&&a>this.pin1Dy0.xPixel1&&a<this.pin1Dy0.xPixel0+2},"~N,~N");c(c$,"isInRightBar2D",function(a,b){return null!=this.imageView&&b==this.fixY(b)&&a>this.pin2Dy0.xPixel1&&a<this.pin2Dy0.xPixel0+2},"~N,~N");c(c$,"toX0",function(a){return this.viewList.get(0).getScale().toX0(this.fixX(a),this.xPixel0,this.xPixel1,this.drawXAxisLeftToRight)},"~N");c(c$,"toY0",function(a){return this.viewList.get(0).getScale().toY0(this.fixY(a),this.yPixel0,
this.yPixel1)},"~N");e(c$,"toX",function(a){return null!=this.imageView&&this.imageView.isXWithinRange(a)?this.imageView.toX(a):this.getScale().toX(this.fixX(a),this.xPixel1,this.drawXAxisLeftToRight)},"~N");e(c$,"toY",function(a){return this.getScale().toY(a,this.yPixel0)},"~N");c(c$,"toPixelX",function(a){return this.getScale().toPixelX(a,this.xPixel0,this.xPixel1,this.drawXAxisLeftToRight)},"~N");c(c$,"toPixelY",function(a){return this.getScale().toPixelY(a,this.yPixel1)},"~N");c(c$,"toPixelX0",
function(a){return this.viewList.get(0).getScale().toPixelX0(a,this.xPixel0,this.xPixel1,this.drawXAxisLeftToRight)},"~N");c(c$,"toPixelY0",function(a){return this.fixY(this.viewList.get(0).getScale().toPixelY0(a,this.yPixel0,this.yPixel1))},"~N");c(c$,"fixX",function(a){return JSV.common.Coordinate.intoRange(a,this.xPixel0,this.xPixel1)},"~N");c(c$,"fixY",function(a){return JSV.common.Coordinate.intoRange(a,this.yPixel0,this.yPixel1)},"~N");c(c$,"getXPixel0",function(){return this.xPixel0});c(c$,
"getXPixels",function(){return this.xPixels});e(c$,"getYPixels",function(){return this.yPixels});c(c$,"getScale",function(){return this.viewData.getScale()});c(c$,"toPixelYint",function(a){return this.yPixel1-w(Double.isNaN(a)?-2147483648:this.yPixels*a)},"~N");c(c$,"findAnnotation2D",function(a){for(var b=this.annotations.size();0<=--b;){var d=this.annotations.get(b);if(this.isNearby(d,a,this.imageView,10))return d}return null},"JSV.common.Coordinate");c(c$,"addAnnotation",function(a,b){null==this.annotations&&
(this.annotations=new JU.Lst);for(var d=!1,c=this.annotations.size();0<=--c;)if(a.is2D?this.isNearby(this.annotations.get(c),a,this.imageView,10):a.equals(this.annotations.get(c)))d=!0,this.annotations.remove(c);0<a.text.length&&(!d||!b)&&this.annotations.addLast(a)},"JSV.common.Annotation,~B");c(c$,"setImageWindow",function(){this.imageView.setPixelWidthHeight(w((this.pd.display1D?0.6:1)*this.xPixels0),this.yPixels);this.imageView.setXY0(this.getSpectrumAt(0),w(Math.floor(this.xPixel10-this.imageView.xPixels)),
this.yPixel0)});c(c$,"findNearestMaxMin",function(){if(1<this.nSpectra&&0>this.iSpectrumClicked)return!1;this.xValueMovedTo=this.getSpectrum().findXForPeakNearest(this.xValueMovedTo);this.setXPixelMovedTo(this.xValueMovedTo,1.7976931348623157E308,0,0);return!Double.isNaN(this.xValueMovedTo)});c(c$,"setXPixelMovedTo",function(a,b,d,c){1.7976931348623157E308==a&&1.7976931348623157E308==b?(this.xPixelMovedTo=d,this.xPixelMovedTo2=c,this.isLinked&&this.sticky2Dcursor&&this.pd.setlinkedXMove(this,this.toX(this.xPixelMovedTo),
!1)):(1.7976931348623157E308!=a&&(this.xPixelMovedTo=this.toPixelX(a),this.fixX(this.xPixelMovedTo)!=this.xPixelMovedTo&&(this.xPixelMovedTo=-1),this.xPixelMovedTo2=-1,1E10!=a&&this.setSpectrumClicked(this.getFixedSelectedSpectrumIndex())),1.7976931348623157E308!=b&&(this.xPixelMovedTo2=this.toPixelX(b)))},"~N,~N,~N,~N");c(c$,"processPendingMeasurement",function(a,b,d){if(this.isInPlotRegion(a,b)){var c=this.toX(a),g=this.toY(b),e=c;switch(d){case 0:this.pendingMeasurement.setPt2(this.toX(a),this.toY(b));
break;case 3:case 2:if(0>this.iSpectrumClicked)break;var l=this.spectra.get(this.iSpectrumClicked);this.setScale(this.iSpectrumClicked);3!=d&&(d=this.findMeasurement(this.selectedSpectrumMeasurements,a,b,1),null!=d?(c=d.getXVal(),g=d.getYVal()):null!=(d=this.findMeasurement(this.selectedSpectrumMeasurements,a,b,2))?(c=d.getXVal2(),g=d.getYVal2()):c=this.getNearestPeak(l,c,g));this.pendingMeasurement=(new JSV.common.Measurement).setM1(c,g,l);this.pendingMeasurement.setPt2(e,g);this.pd.repaint();break;
case 1:case -2:case -3:for(e=null!=this.pendingMeasurement&&this.isVisible(this.getDialog(JSV.common.Annotation.AType.Measurements,-1));e;){this.setScale(this.getSpectrumIndex(this.pendingMeasurement.spec));if(3!=d){if(!this.findNearestMaxMin()){e=!1;break}a=this.xPixelMovedTo}c=this.toX(a);g=this.toY(b);this.pendingMeasurement.setPt2(c,g);if(0==this.pendingMeasurement.text.length){e=!1;break}this.setMeasurement(this.pendingMeasurement);if(1!=d){e=!1;break}this.setSpectrumClicked(this.getSpectrumIndex(this.pendingMeasurement.spec));
this.pendingMeasurement=(new JSV.common.Measurement).setM1(c,g,this.pendingMeasurement.spec);break}e||(this.pendingMeasurement=null);this.pd.repaint();break;case 5:this.findNearestMaxMin()?(a=this.getFixedSelectedSpectrumIndex(),Double.isNaN(this.lastXMax)||this.lastSpecClicked!=a||null==this.pendingMeasurement?(this.lastXMax=this.xValueMovedTo,this.lastSpecClicked=a,this.pendingMeasurement=(new JSV.common.Measurement).setM1(this.xValueMovedTo,this.yValueMovedTo,this.spectra.get(a))):(this.pendingMeasurement.setPt2(this.xValueMovedTo,
this.yValueMovedTo),0<this.pendingMeasurement.text.length&&this.setMeasurement(this.pendingMeasurement),this.pendingMeasurement=null,this.lastXMax=NaN)):this.lastXMax=NaN}}else this.pendingMeasurement=null},"~N,~N,~N");c(c$,"checkIntegralNormalizationClick",function(a,b){if(null==this.selectedSpectrumIntegrals)return!1;var d=this.findMeasurement(this.selectedSpectrumIntegrals,a,b,-5);if(null==d)return!1;this.selectedIntegral=d;this.pd.normalizeIntegral();this.updateDialog(JSV.common.Annotation.AType.Integration,
-1);this.setSpectrumClicked(this.getSpectrumIndex(d.spec));return!0},"~N,~N");c(c$,"getNearestPeak",function(a,b,d){var c=JSV.common.Coordinate.getNearestXWithYAbove(a.getXYCoords(),b,d,a.isInverted(),!1);a=JSV.common.Coordinate.getNearestXWithYAbove(a.getXYCoords(),b,d,a.isInverted(),!0);return Double.isNaN(c)?a:Double.isNaN(a)?c:Math.abs(c-b)<Math.abs(a-b)?c:a},"JSV.common.Spectrum,~N,~N");c(c$,"findMeasurement",function(a,b,d,c){if(null==a||0==a.size())return null;if(0==c){var g=this.findMeasurement(a,
b,d,-1);return null!=g||u(a.get(0),JSV.common.Integral)?g:this.findMeasurement(a,b,d,-2)}for(var e=a.size();0<=--e;){var g=a.get(e),l,j,m,v;u(g,JSV.common.Integral)?(l=j=this.toPixelX(g.getXVal2()),m=this.toPixelYint(g.getYVal()),v=this.toPixelYint(g.getYVal2())):(l=this.toPixelX(g.getXVal()),j=this.toPixelX(g.getXVal2()),m=v=-2==c?this.yPixel1-2:this.toPixelY(g.getYVal()));switch(c){case 1:if(4>Math.abs(b-l)+Math.abs(d-m))return g;break;case 2:if(4>Math.abs(b-j)+Math.abs(d-v))return g;break;case -5:m=
v=w((m+v)/2),j=l+20;default:if(JSV.common.GraphSet.isOnLine(b,d,l,m,j,v))return g}}return null},"JSV.common.MeasurementData,~N,~N,~N");c(c$,"setMeasurement",function(a){var b=this.getSpectrumIndex(a.spec),d=this.getDialog(JSV.common.Annotation.AType.Measurements,b);null==d&&this.addDialog(b,JSV.common.Annotation.AType.Measurements,d=new JSV.common.MeasurementData(JSV.common.Annotation.AType.Measurements,a.spec));d.getData().addLast(a.copyM());this.updateDialog(JSV.common.Annotation.AType.Measurements,
-1)},"JSV.common.Measurement");c(c$,"checkArrowUpDownClick",function(a,b){var d=!1,c=this.isArrowClick(a,b,3)?JSV.common.GraphSet.RT2:this.isArrowClick(a,b,4)?1/JSV.common.GraphSet.RT2:0;if(0!=c){1<this.nSplit&&this.setSpectrumSelected(this.iSpectrumMovedTo);if((1==this.nSpectra||0<=this.iSpectrumSelected)&&this.spectra.get(this.getFixedSelectedSpectrumIndex()).isTransmittance())c=1/c;this.viewData.scaleSpectrum(null==this.imageView?this.iSpectrumSelected:-2,c);d=!0}else this.isArrowClick(a,b,-1)&&
(this.resetViewCompletely(),d=!0);d&&(null!=this.imageView&&(this.update2dImage(!1),this.resetPinsFromView()),this.pd.taintedAll=!0);return d},"~N,~N");c(c$,"resetViewCompletely",function(){this.clearViews();this.showAllStacked&&!this.stackSelected&&this.closeDialogsExcept(JSV.common.Annotation.AType.NONE);this.viewData.resetScaleFactors();this.updateDialogs()});c(c$,"checkArrowLeftRightClick",function(a,b){if(this.haveLeftRightArrows){var d=this.isArrowClick(a,b,1)?-1:this.isArrowClick(a,b,2)?1:
0;if(0!=d)return this.setSpectrumClicked((this.iSpectrumSelected+d)%this.nSpectra),!0;if(this.isArrowClick(a,b,0)){if(this.showAllStacked)return this.showAllStacked=!1,this.setSpectrumClicked(this.getFixedSelectedSpectrumIndex()),!0;this.showAllStacked=this.allowStacking;this.setSpectrumSelected(-1);this.stackSelected=!1}}return!1},"~N,~N");c(c$,"isArrowClick",function(a,b,d){switch(d){case 3:case 4:case -1:return d=w((this.yPixel00+this.yPixel11)/2)+15*(3==d?-1:4==d?1:0),10>Math.abs(this.xVArrows-
a)&&10>Math.abs(d-b);case 1:case 2:case 0:return d=this.xHArrows+15*(1==d?-1:2==d?1:0),10>Math.abs(d-a)&&10>Math.abs(this.yHArrows-b)}return!1},"~N,~N,~N");c(c$,"setWidgetValueByUser",function(a){var b;b=a===this.cur2Dy?""+this.imageView.toSubspectrumIndex(a.yPixel0):a===this.pin1Dx01?""+Math.min(this.pin1Dx0.getXVal(),this.pin1Dx1.getXVal())+" - "+Math.max(this.pin1Dx0.getXVal(),this.pin1Dx1.getXVal()):a===this.pin1Dy01?""+Math.min(this.pin1Dy0.getYVal(),this.pin1Dy1.getYVal())+" - "+Math.max(this.pin1Dy0.getYVal(),
this.pin1Dy1.getYVal()):a===this.pin2Dx01?""+Math.min(this.pin2Dx0.getXVal(),this.pin2Dx1.getXVal())+" - "+Math.max(this.pin2Dx0.getXVal(),this.pin2Dx1.getXVal()):a===this.pin2Dy01?""+w(Math.min(this.pin2Dy0.getYVal(),this.pin2Dy1.getYVal()))+" - "+w(Math.max(this.pin2Dy0.getYVal(),this.pin2Dy1.getYVal())):""+a.getValue();b=this.pd.getInput("New value?","Set Slider",b);if(null!=b){b=b.trim();try{if(a===this.pin1Dx01||a===this.pin1Dy01||a===this.pin2Dx01||a===this.pin2Dy01){var d=b.indexOf("-",1);
if(!(0>d)){var c=Double.$valueOf(b.substring(0,d)).doubleValue(),g=Double.$valueOf(b.substring(d+1)).doubleValue();a===this.pin1Dx01?this.doZoom(c,this.pin1Dy0.getYVal(),g,this.pin1Dy1.getYVal(),!0,!1,!1,!0,!0):a===this.pin1Dy01?this.doZoom(this.pin1Dx0.getXVal(),c,this.pin1Dx1.getXVal(),g,null==this.imageView,null==this.imageView,!1,!1,!0):a===this.pin2Dx01?(this.imageView.setView0(this.imageView.toPixelX0(c),this.pin2Dy0.yPixel0,this.imageView.toPixelX0(g),this.pin2Dy1.yPixel0),this.doZoom(c,this.pin1Dy0.getYVal(),
g,this.pin1Dy1.getYVal(),!1,!1,!1,!0,!0)):a===this.pin2Dy01&&(this.imageView.setView0(this.pin2Dx0.xPixel0,this.imageView.toPixelY0(c),this.pin2Dx1.xPixel0,this.imageView.toPixelY0(g)),this.doZoom(this.imageView.toX(this.imageView.xPixel0),this.getScale().minY,this.imageView.toX(this.imageView.xPixel0+this.imageView.xPixels-1),this.getScale().maxY,!1,!1,!1,!1,!0))}}else{var e=Double.$valueOf(b).doubleValue();a.isXtype?(g=a===this.pin1Dx0||a===this.cur2Dx0||a===this.pin2Dx0?this.pin1Dx1.getXVal():
this.pin1Dx0.getXVal(),this.doZoom(e,0,g,0,!a.is2D,!1,!1,!0,!0)):a===this.cur2Dy?this.setCurrentSubSpectrum(w(e)):a===this.pin2Dy0||a===this.pin2Dy1?(g=a===this.pin2Dy0?this.pin2Dy1.yPixel0:this.pin2Dy0.yPixel0,this.imageView.setView0(this.pin2Dx0.xPixel0,this.imageView.subIndexToPixelY(w(e)),this.pin2Dx1.xPixel0,g)):(g=a===this.pin1Dy0?this.pin1Dy1.getYVal():this.pin1Dy0.getYVal(),this.doZoom(this.pin1Dx0.getXVal(),e,this.pin1Dx1.getXVal(),g,null==this.imageView,null==this.imageView,!1,!1,!0))}}catch(l){if(!A(l,
Exception))throw l;}}},"JSV.common.PlotWidget");c(c$,"removeAllHighlights",function(a){if(null==a)this.highlights.clear();else for(var b=this.highlights.size();0<=--b;)this.highlights.get(b).spectrum===a&&this.highlights.remove(b)},"JSV.common.Spectrum");c(c$,"setCoordClicked",function(a,b,d){0==d&&(this.nextClickForSetPeak=!1);if(Double.isNaN(b))return this.pd.coordClicked=null,this.pd.coordsClicked=null;this.pd.coordClicked=(new JSV.common.Coordinate).set(this.lastClickX=b,d);this.pd.coordsClicked=
this.getSpectrum().getXYCoords();this.pd.xPixelClicked=this.lastPixelX=a;return this.pd.coordClicked},"~N,~N,~N");c(c$,"setWidgets",function(a,b,d){if(a||null==this.pin1Dx0)null==this.zoomBox1D?this.newPins():this.resetPinPositions();this.setDerivedPins(b);this.setPinSliderPositions(d)},"~B,~N,~B");c(c$,"newPins",function(){this.zoomBox1D=new JSV.common.PlotWidget("zoomBox1D");this.pin1Dx0=new JSV.common.PlotWidget("pin1Dx0");this.pin1Dx1=new JSV.common.PlotWidget("pin1Dx1");this.pin1Dy0=new JSV.common.PlotWidget("pin1Dy0");
this.pin1Dy1=new JSV.common.PlotWidget("pin1Dy1");this.pin1Dx01=new JSV.common.PlotWidget("pin1Dx01");this.pin1Dy01=new JSV.common.PlotWidget("pin1Dy01");this.cur1D2x1=new JSV.common.PlotWidget("cur1D2x1");this.cur1D2x1.color=JSV.common.ScriptToken.PEAKTABCOLOR;this.cur1D2x2=new JSV.common.PlotWidget("cur1D2x2");this.cur1D2x2.color=JSV.common.ScriptToken.PEAKTABCOLOR;if(null!=this.imageView){this.zoomBox2D=new JSV.common.PlotWidget("zoomBox2D");this.pin2Dx0=new JSV.common.PlotWidget("pin2Dx0");this.pin2Dx1=
new JSV.common.PlotWidget("pin2Dx1");this.pin2Dy0=new JSV.common.PlotWidget("pin2Dy0");this.pin2Dy1=new JSV.common.PlotWidget("pin2Dy1");this.pin2Dx01=new JSV.common.PlotWidget("pin2Dx01");this.pin2Dy01=new JSV.common.PlotWidget("pin2Dy01");this.cur2Dx0=new JSV.common.PlotWidget("cur2Dx0");this.cur2Dx1=new JSV.common.PlotWidget("cur2Dx1");this.cur2Dy=new JSV.common.PlotWidget("cur2Dy");this.pin2Dy0.setY(0,this.imageView.toPixelY0(0));var a=this.getSpectrumAt(0).getSubSpectra().size();this.pin2Dy1.setY(a,
this.imageView.toPixelY0(a))}this.setWidgetX(this.pin1Dx0,this.getScale().minX);this.setWidgetX(this.pin1Dx1,this.getScale().maxX);this.setWidgetY(this.pin1Dy0,this.getScale().minY);this.setWidgetY(this.pin1Dy1,this.getScale().maxY);this.widgets=[this.zoomBox1D,this.zoomBox2D,this.pin1Dx0,this.pin1Dx01,this.pin1Dx1,this.pin1Dy0,this.pin1Dy01,this.pin1Dy1,this.pin2Dx0,this.pin2Dx01,this.pin2Dx1,this.pin2Dy0,this.pin2Dy01,this.pin2Dy1,this.cur2Dx0,this.cur2Dx1,this.cur2Dy,this.cur1D2x1,this.cur1D2x2]});
c(c$,"setWidgetX",function(a,b){a.setX(b,this.toPixelX0(b))},"JSV.common.PlotWidget,~N");c(c$,"setWidgetY",function(a,b){a.setY(b,this.toPixelY0(b))},"JSV.common.PlotWidget,~N");c(c$,"resetPinsFromView",function(){null!=this.pin1Dx0&&(this.setWidgetX(this.pin1Dx0,this.getScale().minXOnScale),this.setWidgetX(this.pin1Dx1,this.getScale().maxXOnScale),this.setWidgetY(this.pin1Dy0,this.getScale().minYOnScale),this.setWidgetY(this.pin1Dy1,this.getScale().maxYOnScale))});c(c$,"resetPinPositions",function(){this.resetX(this.pin1Dx0);
this.resetY(this.pin1Dy0);this.resetY(this.pin1Dy1);null==this.imageView?(null!=this.gs2dLinkedX&&this.resetX(this.cur1D2x1),null!=this.gs2dLinkedY&&this.resetX(this.cur1D2x2)):(this.pin2Dy0.setY(this.pin2Dy0.getYVal(),this.imageView.toPixelY0(this.pin2Dy0.getYVal())),this.pin2Dy1.setY(this.pin2Dy1.getYVal(),this.imageView.toPixelY0(this.pin2Dy1.getYVal())))});c(c$,"resetX",function(a){this.setWidgetX(a,a.getXVal())},"JSV.common.PlotWidget");c(c$,"resetY",function(a){this.setWidgetY(a,a.getYVal())},
"JSV.common.PlotWidget");c(c$,"setPinSliderPositions",function(a){this.pin1Dx0.yPixel0=this.pin1Dx1.yPixel0=this.pin1Dx01.yPixel0=this.yPixel0-5;this.pin1Dx0.yPixel1=this.pin1Dx1.yPixel1=this.pin1Dx01.yPixel1=this.yPixel0;this.cur1D2x1.yPixel1=this.cur1D2x2.yPixel1=this.yPixel0-5;this.cur1D2x1.yPixel0=this.cur1D2x2.yPixel0=this.yPixel1+6;null==this.imageView?(this.pin1Dy0.xPixel0=this.pin1Dy1.xPixel0=this.pin1Dy01.xPixel0=this.xPixel1+5,this.pin1Dy0.xPixel1=this.pin1Dy1.xPixel1=this.pin1Dy01.xPixel1=
this.xPixel1):(this.pin1Dy0.xPixel0=this.pin1Dy1.xPixel0=this.pin1Dy01.xPixel0=this.imageView.xPixel1+15,this.pin1Dy0.xPixel1=this.pin1Dy1.xPixel1=this.pin1Dy01.xPixel1=this.imageView.xPixel1+10,this.pin2Dx0.yPixel0=this.pin2Dx1.yPixel0=this.pin2Dx01.yPixel0=this.yPixel0-5,this.pin2Dx0.yPixel1=this.pin2Dx1.yPixel1=this.pin2Dx01.yPixel1=this.yPixel0,this.pin2Dy0.xPixel0=this.pin2Dy1.xPixel0=this.pin2Dy01.xPixel0=this.imageView.xPixel1+5,this.pin2Dy0.xPixel1=this.pin2Dy1.xPixel1=this.pin2Dy01.xPixel1=
this.imageView.xPixel1,this.cur2Dx0.yPixel0=this.cur2Dx1.yPixel0=this.yPixel1+6,this.cur2Dx0.yPixel1=this.cur2Dx1.yPixel1=this.yPixel0-5,this.cur2Dx0.yPixel0=this.cur2Dx1.yPixel0=this.yPixel1+6,this.cur2Dx1.yPixel1=this.cur2Dx1.yPixel1=this.yPixel0-5,this.cur2Dy.xPixel0=a?w((this.xPixel1+this.imageView.xPixel0)/2):this.imageView.xPixel0-6,this.cur2Dy.xPixel1=this.imageView.xPixel1+5)},"~B");c(c$,"setDerivedPins",function(a){this.triggered=!0;null!=this.gs2dLinkedX&&this.cur1D2x1.setX(this.cur1D2x1.getXVal(),
this.toPixelX(this.cur1D2x1.getXVal()));null!=this.gs2dLinkedY&&this.cur1D2x2.setX(this.cur1D2x2.getXVal(),this.toPixelX(this.cur1D2x2.getXVal()));this.pin1Dx01.setX(0,w((this.pin1Dx0.xPixel0+this.pin1Dx1.xPixel0)/2));this.pin1Dy01.setY(0,w((this.pin1Dy0.yPixel0+this.pin1Dy1.yPixel0)/2));this.pin1Dx01.setEnabled(Math.min(this.pin1Dx0.xPixel0,this.pin1Dx1.xPixel0)>this.xPixel0||Math.max(this.pin1Dx0.xPixel0,this.pin1Dx1.xPixel0)<this.xPixel1);this.pin1Dy01.setEnabled(Math.min(this.pin1Dy0.yPixel0,
this.pin1Dy1.yPixel0)>Math.min(this.toPixelY(this.getScale().minY),this.toPixelY(this.getScale().maxY))||Math.max(this.pin1Dy0.yPixel0,this.pin1Dy1.yPixel0)<Math.max(this.toPixelY(this.getScale().minY),this.toPixelY(this.getScale().maxY)));if(null!=this.imageView){var b=this.pin1Dx0.getXVal();this.cur2Dx0.setX(b,this.imageView.toPixelX(b));b=this.pin1Dx1.getXVal();this.cur2Dx1.setX(b,this.imageView.toPixelX(b));b=this.imageView.toX(this.imageView.xPixel0);this.pin2Dx0.setX(b,this.imageView.toPixelX0(b));
b=this.imageView.toX(this.imageView.xPixel1);this.pin2Dx1.setX(b,this.imageView.toPixelX0(b));this.pin2Dx01.setX(0,w((this.pin2Dx0.xPixel0+this.pin2Dx1.xPixel0)/2));b=this.imageView.imageHeight-1-this.imageView.yView1;this.pin2Dy0.setY(b,this.imageView.toPixelY0(b));b=this.imageView.imageHeight-1-this.imageView.yView2;this.pin2Dy1.setY(b,this.imageView.toPixelY0(b));this.pin2Dy01.setY(0,w((this.pin2Dy0.yPixel0+this.pin2Dy1.yPixel0)/2));this.cur2Dy.yPixel0=this.cur2Dy.yPixel1=this.imageView.subIndexToPixelY(a);
this.pin2Dx01.setEnabled(Math.min(this.pin2Dx0.xPixel0,this.pin2Dx1.xPixel0)!=this.imageView.xPixel0||Math.max(this.pin2Dx0.xPixel0,this.pin2Dx1.xPixel1)!=this.imageView.xPixel1);this.pin2Dy01.setEnabled(Math.min(this.pin2Dy0.yPixel0,this.pin2Dy1.yPixel0)!=this.yPixel0||Math.max(this.pin2Dy0.yPixel0,this.pin2Dy1.yPixel1)!=this.yPixel1)}},"~N");c(c$,"doZoom",function(a,b,d,c,g,e,l,j,m){a==d?(a=this.getScale().minXOnScale,d=this.getScale().maxXOnScale):this.isLinked&&j&&this.pd.doZoomLinked(this,a,
d,m,l,g);a>d&&(j=a,a=d,d=j);b>c&&(j=b,b=c,c=j);j=!g&&null!=this.imageView&&(this.imageView.minZ!=b||this.imageView.maxZ!=c);if(this.zoomEnabled||j){if(l){if(!this.getScale().isInRangeX(a)&&!this.getScale().isInRangeX(d))return;this.getScale().isInRangeX(a)?this.getScale().isInRangeX(d)||(d=this.getScale().maxX):a=this.getScale().minX}this.pd.taintedAll=!0;l=this.viewData.getScaleData();var v=G(this.nSpectra,0),p=G(this.nSpectra,0);this.graphsTemp.clear();var n=this.getSpectrumAt(0).getSubSpectra(),
n=null==n||2==n.size();if(this.getSpectrumAt(0).is1D()&&!n){if(this.graphsTemp.addLast(this.getSpectrum()),!JSV.common.ScaleData.setDataPointIndices(this.graphsTemp,a,d,3,v,p))return}else if(!JSV.common.ScaleData.setDataPointIndices(this.spectra,a,d,3,v,p))return;if(n=b==c)g=!j&&g?g=this.getScale().spectrumScaleFactor:1,1E-4>Math.abs(g-1)&&(b=this.getScale().minYOnScale,c=this.getScale().maxYOnScale);g=null;if(n||e)this.getCurrentView(),g=this.viewData.getNewScales(this.iSpectrumSelected,n,b,c);this.getView(a,
d,b,c,v,p,l,g);this.setXPixelMovedTo(1E10,1.7976931348623157E308,0,0);this.setWidgetX(this.pin1Dx0,a);this.setWidgetX(this.pin1Dx1,d);this.setWidgetY(this.pin1Dy0,b);this.setWidgetY(this.pin1Dy1,c);null==this.imageView?this.updateDialogs():(a=this.getSpectrumAt(0).getSubIndex(),d=this.imageView.fixSubIndex(a),d!=a&&this.setCurrentSubSpectrum(d),j&&this.update2dImage(!1));m&&this.addCurrentZoom()}},"~N,~N,~N,~N,~B,~B,~B,~B,~B");c(c$,"updateDialogs",function(){this.updateDialog(JSV.common.Annotation.AType.PeakList,
-1);this.updateDialog(JSV.common.Annotation.AType.Measurements,-1)});c(c$,"setCurrentSubSpectrum",function(a){var b=this.getSpectrumAt(0);a=b.setCurrentSubSpectrum(a);b.isForcedSubset()&&this.viewData.setXRangeForSubSpectrum(this.getSpectrum().getXYCoords());this.pd.notifySubSpectrumChange(a,this.getSpectrum())},"~N");c(c$,"addCurrentZoom",function(){if(this.viewList.size()>this.currentZoomIndex+1)for(var a=this.viewList.size()-1;a>this.currentZoomIndex;a--)this.viewList.remove(a);this.viewList.addLast(this.viewData);
this.currentZoomIndex++});c(c$,"setZoomTo",function(a){this.currentZoomIndex=a;this.viewData=this.viewList.get(a);this.resetPinsFromView()},"~N");c(c$,"clearViews",function(){this.isLinked&&this.pd.clearLinkViews(this);this.setZoom(0,0,0,0);for(var a=this.viewList.size();1<=--a;)this.viewList.remove(a)});c(c$,"drawAll",function(a,b,d,c,g,e){this.g2d=this.pd.g2d;this.gMain=a;var l=this.getSpectrumAt(0).getSubIndex();this.is2DSpectrum=!this.getSpectrumAt(0).is1D()&&(this.isLinked||this.pd.getBoolean(JSV.common.ScriptToken.DISPLAY2D))&&
(null!=this.imageView||this.get2DImage());null!=this.imageView&&e&&(this.pd.isPrinting&&this.g2d!==this.pd.g2d0&&this.g2d.newGrayScaleImage(a,this.image2D,this.imageView.imageWidth,this.imageView.imageHeight,this.imageView.getBuffer()),this.is2DSpectrum&&this.setPositionForFrame(c),this.draw2DImage());var j=this.stackSelected||!this.showAllStacked?this.iSpectrumSelected:-1,m=!this.showAllStacked||1==this.nSpectra||0<=j,v=null==this.imageView||this.pd.display1D,p=0<=j?1:0,n=this.getFixedSelectedSpectrumIndex();
if(v&&e&&(this.fillBox(a,this.xPixel0,this.yPixel0,this.xPixel1,this.yPixel1,JSV.common.ScriptToken.PLOTAREACOLOR),0>j)){m=!0;for(j=0;j<this.nSpectra;j++)this.doPlot(j,c)&&0!=p++&&(m=(new Boolean(m&this.viewData.areYScalesSame(j-1,j))).valueOf())}var q=1==this.nSpectra?0:!this.showAllStacked?this.iSpectrumMovedTo:this.iSpectrumSelected;d=d===a?b:d;if(e){var j=!this.isLinked&&this.isSplittable&&(1==this.nSplit||this.pd.currentSplitPoint==c),k=this.zoomEnabled&&!this.isDrawNoSpectra()&&this.pd.isCurrentGraphSet(this)&&
this.spectra.get(0).isScalable()&&(j||1==this.nSpectra)&&(1==this.nSplit||this.pd.currentSplitPoint==this.iSpectrumMovedTo);this.drawFrame(a,q,j,this.isSplittable,k)}if(this.pd.isCurrentGraphSet(this)&&c==this.pd.currentSplitPoint&&(2>p||0<=this.iSpectrumSelected))this.$haveSelectedSpectrum=!0;this.haveSingleYScale=this.showAllStacked&&1<this.nSpectra?this.allowStackedYScale&&m:!0;if(v){m=I(this.yPixels*(this.yStackOffsetPercent/100));this.haveLeftRightArrows=!1;for(k=j=0;j<this.nSpectra;j++)if(this.doPlot(j,
c)){var q=this.stackSelected&&0<=this.iSpectrumSelected&&this.iSpectrumSelected!=j,r=!this.reversePlot&&this.getShowAnnotation(JSV.common.Annotation.AType.Integration,j)&&(!this.showAllStacked||this.iSpectrumSelected==j)?this.getDialog(JSV.common.Annotation.AType.Integration,j).getData():null;this.setScale(j);var s=this.spectra.get(j);1<this.nSplit&&(n=j);var t=!q&&(1==this.nSplit||this.showAllStacked||this.iSpectrumSelected==c),u=t&&this.$haveSelectedSpectrum&&j==n;t&&(this.resetPinsFromView(),this.drawWidgets(b,
d,l,g,v,u,!1));this.haveSingleYScale&&(j==n&&e)&&(this.drawGrid(a),this.pd.isPrinting&&1<this.nSplit&&this.drawSpectrumSource(a,j));t&&this.drawWidgets(b,d,l,!1,v,u,!0);!this.isDrawNoSpectra()&&((1==this.nSpectra||0<=this.iSpectrumSelected)&&(this.haveSingleYScale&&j==n||this.showAllStacked&&this.stackSelected&&j==this.iSpectrumSelected))&&this.drawHighlightsAndPeakTabs(b,d,j);if(e){if((1==p&&0>this.iSpectrumSelected||this.iSpectrumSelected==j&&this.pd.isCurrentGraphSet(this))&&this.pd.titleOn&&!this.pd.titleDrawn)this.pd.drawTitle(a,
this.height,this.width,this.pd.getDrawTitle(this.pd.isPrinting)),this.pd.titleDrawn=!0;this.haveSingleYScale&&j==n&&(this.pd.getBoolean(JSV.common.ScriptToken.YSCALEON)&&this.drawYScale(a,this),this.pd.getBoolean(JSV.common.ScriptToken.YUNITSON)&&this.drawYUnits(a))}t=s.isContinuous();u=(1<this.nSplit?j==this.iSpectrumMovedTo:this.isLinked||j==n)&&!this.pd.isPrinting&&s.isContinuous();e&&this.drawSpectrum(a,j,k,q,r,t,u);this.drawMeasurements(b,j);null!=this.pendingMeasurement&&this.pendingMeasurement.spec===
s&&this.drawMeasurement(b,this.pendingMeasurement);u&&0<=this.xPixelMovedTo&&this.drawSpectrumPointer(b,s,k,r);1<this.nSpectra&&(1==this.nSplit&&this.pd.isCurrentGraphSet(this)&&e)&&(this.haveLeftRightArrows=!0,this.pd.isPrinting||(this.setScale(0),q=this.iSpectrumSelected,2!=this.nSpectra&&(this.setPlotColor(a,(q+this.nSpectra-1)%this.nSpectra),this.fillArrow(a,1,this.yHArrows,this.xHArrows-9,!0),this.setCurrentBoxColor(a),this.fillArrow(a,1,this.yHArrows,this.xHArrows-9,!1)),0<=q&&(this.setPlotColor(a,
q),this.fillCircle(a,this.xHArrows,this.yHArrows,!0)),this.setCurrentBoxColor(a),this.fillCircle(a,this.xHArrows,this.yHArrows,!1),this.setPlotColor(a,(q+1)%this.nSpectra),this.fillArrow(a,2,this.yHArrows,this.xHArrows+9,!0),this.setCurrentBoxColor(a),this.fillArrow(a,2,this.yHArrows,this.xHArrows+9,!1)));k-=m}e&&(this.pd.getBoolean(JSV.common.ScriptToken.XSCALEON)&&this.drawXScale(a,this),this.pd.getBoolean(JSV.common.ScriptToken.XUNITSON)&&this.drawXUnits(a))}else e&&(this.pd.getBoolean(JSV.common.ScriptToken.XSCALEON)&&
this.drawXScale(a,this.imageView),this.pd.getBoolean(JSV.common.ScriptToken.YSCALEON)&&this.drawYScale(a,this.imageView),0<=l&&this.draw2DUnits(a)),this.drawWidgets(b,d,l,g,v,!0,!1),this.drawWidgets(b,d,l,g,v,!0,!0);null!=this.annotations&&this.drawAnnotations(b,this.annotations,null)},"~O,~O,~O,~N,~B,~B");c(c$,"drawSpectrumSource",function(a,b){this.pd.printFilePath(a,this.pd.thisWidth-this.pd.right,this.yPixel0,this.spectra.get(b).getFilePath())},"~O,~N");c(c$,"doPlot",function(a,b){var d=this.stackSelected&&
0<=this.iSpectrumSelected&&this.iSpectrumSelected!=a,c=this.showAllStacked||-1==this.iSpectrumSelected||this.iSpectrumSelected==a;return 1<this.nSplit?a==b:c&&(!this.pd.isPrinting||!d)},"~N,~N");c(c$,"drawSpectrumPointer",function(a,b,d,c){this.setColorFromToken(a,JSV.common.ScriptToken.PEAKTABCOLOR);var g=this.pd.integralShiftMode;null!=c&&((!this.pd.ctrlPressed||this.pd.isIntegralDrag)&&!this.isOnSpectrum(this.pd.mouseX,this.pd.mouseY,-1)?c=null:0==g&&(g=this.getShiftMode(this.pd.mouseX,this.pd.mouseY)));
var e=this.yValueMovedTo;this.yValueMovedTo=null==c?b.getYValueAt(this.xValueMovedTo):c.getPercentYValueAt(this.xValueMovedTo);this.setCoordStr(this.xValueMovedTo,this.yValueMovedTo);0!=g?(this.setPlotColor(a,0),b=0>g?this.yPixelPlot0:this.yPixelPlot1,this.drawHandle(a,0>g?this.xPixelPlot1:this.xPixelPlot0,b,!1)):(null!=c&&this.g2d.setStrokeBold(a,!0),Double.isNaN(e)||null!=this.pendingMeasurement?(this.g2d.drawLine(a,this.xPixelMovedTo,this.yPixel0,this.xPixelMovedTo,this.yPixel1),0<=this.xPixelMovedTo2&&
this.g2d.drawLine(a,this.xPixelMovedTo2,this.yPixel0,this.xPixelMovedTo2,this.yPixel1),this.yValueMovedTo=NaN):(b=null==c?d+this.toPixelY(this.yValueMovedTo):this.toPixelYint(this.yValueMovedTo/100),b==this.fixY(b)&&this.g2d.drawLine(a,this.xPixelMovedTo,b-10,this.xPixelMovedTo,b+10)),null!=c&&this.g2d.setStrokeBold(a,!1))},"~O,JSV.common.Spectrum,~N,JSV.common.IntegralData");c(c$,"setScale",function(a){this.viewData.setScale(a,this.xPixels,this.yPixels,this.spectra.get(a).isInverted())},"~N");c(c$,
"draw2DUnits",function(a){var b=this.getSpectrumAt(0).nucleusX,d=this.getSpectrumAt(0).nucleusY;this.setColorFromToken(a,JSV.common.ScriptToken.PLOTCOLOR);this.drawUnits(a,b,this.imageView.xPixel1+5*this.pd.scalingFactor,this.yPixel1,1,1);this.drawUnits(a,d,this.imageView.xPixel0-5*this.pd.scalingFactor,this.yPixel0,1,0)},"~O");c(c$,"drawPeakTabs",function(a,b,d){var c=1==this.nSpectra||0<=this.iSpectrumSelected?d.getPeakList():null;if(null!=c&&0<c.size()){null!=this.piMouseOver&&this.piMouseOver.spectrum===
d&&this.pd.isMouseUp()?(this.g2d.setGraphicsColor(b,this.g2d.getColor4(240,240,240,140)),this.drawPeak(b,this.piMouseOver,0),d.setHighlightedPeak(this.piMouseOver)):d.setHighlightedPeak(null);this.setColorFromToken(a,JSV.common.ScriptToken.PEAKTABCOLOR);for(b=c.size();0<=--b;){var g=c.get(b);this.drawPeak(a,g,g===d.getSelectedPeak()?14:7)}}},"~O,~O,JSV.common.Spectrum");c(c$,"drawPeak",function(a,b,d){if(!this.pd.isPrinting){var c=b.getXMin(),g=b.getXMax();c!=g&&this.drawBar(a,b,c,g,null,d)}},"~O,JSV.common.PeakInfo,~N");
c(c$,"drawWidgets",function(a,b,d,c,g,e,l){this.setWidgets(c,d,g);if(!this.pd.isPrinting||!(null==this.imageView?!this.cur1D2Locked:this.sticky2Dcursor)){!this.pd.isPrinting&&!l&&(g?(this.fillBox(a,this.xPixel0,this.pin1Dx0.yPixel1,this.xPixel1,this.pin1Dx1.yPixel1+2,JSV.common.ScriptToken.GRIDCOLOR),this.fillBox(a,this.pin1Dx0.xPixel0,this.pin1Dx0.yPixel1,this.pin1Dx1.xPixel0,this.pin1Dx1.yPixel1+2,JSV.common.ScriptToken.PLOTCOLOR)):(this.fillBox(a,this.imageView.xPixel0,this.pin2Dx0.yPixel1,this.imageView.xPixel1,
this.pin2Dx0.yPixel1+2,JSV.common.ScriptToken.GRIDCOLOR),this.fillBox(a,this.pin2Dx0.xPixel0,this.pin2Dx0.yPixel1,this.pin2Dx1.xPixel0,this.pin2Dx1.yPixel1+2,JSV.common.ScriptToken.PLOTCOLOR),this.fillBox(a,this.pin2Dy0.xPixel1,this.yPixel1,this.pin2Dy1.xPixel1+2,this.yPixel0,JSV.common.ScriptToken.GRIDCOLOR),this.fillBox(a,this.pin2Dy0.xPixel1,this.pin2Dy0.yPixel1,this.pin2Dy1.xPixel1+2,this.pin2Dy1.yPixel0,JSV.common.ScriptToken.PLOTCOLOR)),this.fillBox(a,this.pin1Dy0.xPixel1,this.yPixel1,this.pin1Dy1.xPixel1+
2,this.yPixel0,JSV.common.ScriptToken.GRIDCOLOR),e&&this.fillBox(a,this.pin1Dy0.xPixel1,this.pin1Dy0.yPixel1,this.pin1Dy1.xPixel1+2,this.pin1Dy1.yPixel0,JSV.common.ScriptToken.PLOTCOLOR));for(d=0;d<this.widgets.length;d++)if(c=this.widgets[d],!(null==c||!c.isPinOrCursor&&!this.zoomEnabled)){var j=c===this.cur1D2x1||c===this.cur1D2x2||c===this.cur2Dx0||c===this.cur2Dx1||c===this.cur2Dy;if((c.isPin||!c.isPinOrCursor)!=l){if(c.is2D){if(c===this.cur2Dx0&&!g)continue}else{var m=c===this.pin1Dy0||c===this.pin1Dy1||
c===this.pin1Dy01;if(null!=this.imageView&&g==m||m&&!e||c===this.cur1D2x1&&null==this.gs2dLinkedX||c===this.cur1D2x2&&null==this.gs2dLinkedY||c===this.zoomBox1D&&(this.pd.isIntegralDrag||0!=this.pd.integralShiftMode))if(!this.isLinked||null!=this.imageView)continue}if(!this.pd.isPrinting||j)c.isPinOrCursor?(this.setColorFromToken(a,c.color),this.g2d.drawLine(a,c.xPixel0,c.yPixel0,c.xPixel1,c.yPixel1),c.isVisible=!0,c.isPin&&this.drawHandle(a,c.xPixel0,c.yPixel0,!c.isEnabled)):c.xPixel1!=c.xPixel0&&
this.fillBox(b,c.xPixel0,c.yPixel0,c.xPixel1,c.yPixel1,c===this.zoomBox1D&&this.pd.shiftPressed?JSV.common.ScriptToken.ZOOMBOXCOLOR2:JSV.common.ScriptToken.ZOOMBOXCOLOR)}}}},"~O,~O,~N,~B,~B,~B,~B");c(c$,"drawBar",function(a,b,d,c,g,e){var l=c+d,j=Math.abs(c-d),m=Math.abs(this.toX(this.xPixel1)-this.toX(this.xPixel0));0<e&&j>m/20&&(j=m/20,d=l/2-j,c=l/2+j);d=this.toPixelX(d);c=this.toPixelX(c);d>c&&(l=d,d=c,c=l);d=this.fixX(d);c=this.fixX(c);3>c-d&&(d-=2,c+=2);null!=b&&b.setPixelRange(d,c);0==e?this.fillBox(a,
d,this.yPixel0,c,this.yPixel0+this.yPixels,g):(this.fillBox(a,d,this.yPixel0,c,this.yPixel0+3,g),null!=b&&(d=w((d+c)/2),this.fillBox(a,d-1,this.yPixel0,d+1,this.yPixel0+e,g)))},"~O,JSV.common.PeakInfo,~N,~N,JSV.common.ScriptToken,~N");c(c$,"drawSpectrum",function(a,b,d,c,g,e,l){var j=this.spectra.get(b);this.drawPlot(a,b,j,e,d,c,null,l);null!=g&&(this.haveIntegralDisplayed(b)&&this.drawPlot(a,b,j,!0,d,!1,g,!0),this.drawIntegralValues(a,b,d));null!=this.getIntegrationRatios(b)&&this.drawAnnotations(a,
this.getIntegrationRatios(b),JSV.common.ScriptToken.INTEGRALPLOTCOLOR)},"~O,~N,~N,~B,JSV.common.IntegralData,~B,~B");c(c$,"getMeasurements",function(a,b){var d=this.getDialog(a,b);return null==d||0==d.getData().size()||!d.getState()?null:d.getData()},"JSV.common.Annotation.AType,~N");c(c$,"drawPlot",function(a,b,d,c,g,e,l,j){var m=null==l?d.getXYCoords():this.getIntegrationGraph(b).getXYCoords(),v=null!=l;l=null==l?null:l.getBitSet();j=!v&&!e&&null!=this.pendingIntegral&&this.pendingIntegral.spec===
this.spectra.get(b)||null!=d.fillColor&&j;e=e?-2:v?-1:!this.allowStacking?0:b;this.setPlotColor(a,e);var p=!0,n=this.toPixelY(0);v?j=(new Boolean(j&n==this.fixY(n))).valueOf():n=this.fixY(n);var q=this.viewData.getStartingPointIndex(b);b=this.viewData.getEndingPointIndex(b);if(c){b--;var k=!j&&this.g2d.canDoLineTo();k&&this.g2d.doStroke(a,!0);var r=!1;for(c=q;c<=b;c++){var s=m[c],t=m[c+1],u=v?this.toPixelYint(s.getYVal()):this.toPixelY(s.getYVal());if(-2147483648!=u){var w=v?this.toPixelYint(t.getYVal()):
this.toPixelY(t.getYVal());if(-2147483648!=w){var x=this.toPixelX(s.getXVal()),y=this.toPixelX(t.getXVal()),u=this.fixY(g+u),w=this.fixY(g+w);v&&(c==q&&(this.xPixelPlot1=x,this.yPixelPlot0=u),this.xPixelPlot0=y,this.yPixelPlot1=w);if(!(y==x&&u==w))if(j&&(!v||this.pendingIntegral.overlaps(s.getXVal(),t.getXVal())))v?(this.g2d.setGraphicsColor(a,this.pd.getColor(JSV.common.ScriptToken.INTEGRALPLOTCOLOR)),this.g2d.drawLine(a,x,n,x,u)):(this.g2d.setGraphicsColor(a,d.fillColor),this.g2d.fillRect(a,x,Math.min(n,
u),y-x,Math.abs(n-u))),this.setPlotColor(a,e);else if(!(u==w&&u==this.yPixel0)&&(null!=l&&l.get(c)!=p&&(p=l.get(c),!this.pd.isPrinting&&0!=this.pd.integralShiftMode?this.setPlotColor(a,0):p?this.setColorFromToken(a,JSV.common.ScriptToken.INTEGRALPLOTCOLOR):this.setPlotColor(a,-3)),!this.pd.isPrinting||p))r?this.g2d.lineTo(a,y,w):(this.g2d.drawLine(a,x,u,y,w),r=k)}}}k&&this.g2d.doStroke(a,!1)}else{for(c=q;c<=b;c++)d=m[c],w=this.toPixelY(d.getYVal()),-2147483648!=w&&(x=this.toPixelX(d.getXVal()),u=
this.toPixelY(Math.max(this.getScale().minYOnScale,0)),u=this.fixY(g+u),w=this.fixY(g+w),u==w&&(u==this.yPixel0||u==this.yPixel1)||this.g2d.drawLine(a,x,u,x,w));this.getScale().isYZeroOnScale()&&(g+=this.toPixelY(this.getScale().spectrumYRef),g==this.fixY(g)&&this.g2d.drawLine(a,this.xPixel1,g,this.xPixel0,g))}},"~O,~N,JSV.common.Spectrum,~B,~N,~B,JSV.common.IntegralData,~B");c(c$,"drawFrame",function(a,b,d,c,g){if(!this.pd.gridOn||this.pd.isPrinting)if(this.setColorFromToken(a,JSV.common.ScriptToken.GRIDCOLOR),
this.g2d.drawRect(a,this.xPixel0,this.yPixel0,this.xPixels,this.yPixels),this.pd.isPrinting)return;this.setCurrentBoxColor(a);g&&(0<=b&&(this.setPlotColor(a,b),this.fillArrow(a,3,this.xVArrows,w((this.yPixel00+this.yPixel11)/2)-9,!0),this.fillArrow(a,4,this.xVArrows,w((this.yPixel00+this.yPixel11)/2)+9,!0),this.setCurrentBoxColor(a)),this.fillArrow(a,3,this.xVArrows,w((this.yPixel00+this.yPixel11)/2)-9,!1),this.fillCircle(a,this.xVArrows,w((this.yPixel00+this.yPixel11)/2),!1),this.fillArrow(a,4,this.xVArrows,
w((this.yPixel00+this.yPixel11)/2)+9,!1));if(null==this.imageView&&d){b=this.xPixel00+10;d=this.xPixel11-10;g=this.yPixel00+1;var e=this.yPixel11-2;this.g2d.drawLine(a,b,g,d,g);this.g2d.drawLine(a,d,g,d,e);this.g2d.drawLine(a,b,e,d,e);c&&this.fillBox(a,d-10,g,d,g+10,null)}},"~O,~N,~B,~B,~B");c(c$,"drawGrid",function(a){if(this.pd.gridOn&&null==this.imageView){this.setColorFromToken(a,JSV.common.ScriptToken.GRIDCOLOR);var b;if(Double.isNaN(this.getScale().firstX)){b=this.getScale().maxXOnScale+this.getScale().steps[0]/
2;for(var d=this.getScale().minXOnScale;d<b;d+=this.getScale().steps[0]){var c=this.toPixelX(d);this.g2d.drawLine(a,c,this.yPixel0,c,this.yPixel1)}}else{b=1.0001*this.getScale().maxXOnScale;for(d=this.getScale().firstX;d<=b;d+=this.getScale().steps[0])c=this.toPixelX(d),this.g2d.drawLine(a,c,this.yPixel0,c,this.yPixel1)}for(d=this.getScale().firstY;d<this.getScale().maxYOnScale+this.getScale().steps[1]/2;d+=this.getScale().steps[1])b=this.toPixelY(d),b==this.fixY(b)&&this.g2d.drawLine(a,this.xPixel0,
b,this.xPixel1,b)}},"~O");c(c$,"drawXScale",function(a,b){this.setColorFromToken(a,JSV.common.ScriptToken.SCALECOLOR);this.pd.isPrinting&&this.g2d.drawLine(a,b.getXPixel0(),this.yPixel1,b.getXPixel0()+b.getXPixels()-1,this.yPixel1);for(var d=this.getScale().precision[0],c=this.pd.setFont(a,b.getXPixels(),0,this.pd.isPrinting?10:12,!1),g=this.yPixel1,e=this.yPixel1+4*this.pd.scalingFactor,l=this.yPixel1+2*this.pd.scalingFactor,c=c.getHeight(),j=b.toPixelX(this.getScale().steps[0])-b.toPixelX(0),m=
Math.abs(0.95*j),p=this.getScale().firstX-this.getScale().steps[0],n=1.0001*(this.getScale().maxXOnScale+this.getScale().steps[0]),q=0;2>q;q++){1==q&&JSV.common.ScaleData.fixScale(this.mapX);for(var k=1E10,r=p;r<=n;r+=this.getScale().steps[0]){var j=b.toPixelX(r),s=Double.$valueOf(r),t;switch(q){case 0:t=JU.DF.formatDecimalDbl(r,d);this.mapX.put(s,t);this.drawTick(a,j,g,e,b);j=Math.abs(k-r);k=this.getScale().minorTickCounts[0];if(0!=k){j/=k;for(t=1;t<k;t++)this.drawTick(a,b.toPixelX(r-t*j),g,l,b)}k=
r;continue;case 1:t=this.mapX.get(s);if(null==t||j!=b.fixX(j))continue;var s=this.pd.getStringWidth(t),u=j+w(s/2)==b.fixX(j+w(s/2))?2:0;0<u&&this.g2d.drawString(a,t,j-w(s/u),e+c);r+=Math.floor(s/m)*this.getScale().steps[0]}}}this.mapX.clear()},"~O,JSV.common.XYScaleConverter");c(c$,"drawTick",function(a,b,d,c,g){b==g.fixX(b)&&this.g2d.drawLine(a,b,d,b,c)},"~O,~N,~N,~N,JSV.common.XYScaleConverter");c(c$,"drawYScale",function(a,b){var d=b.getScale(),c=d.precision[1],g=this.pd.setFont(a,b.getXPixels(),
0,this.pd.isPrinting?10:12,!1).getHeight(),e=d.maxYOnScale+d.steps[1]/2,l=-2147483648;this.setColorFromToken(a,JSV.common.ScriptToken.SCALECOLOR);for(var j=0;2>j;j++){1==j&&JSV.common.ScaleData.fixScale(this.mapX);for(var m=d.firstY;m<e;m+=d.steps[1]){var p=Double.$valueOf(m),n=b.getXPixel0(),q=b.toPixelY(m);if(q==b.fixY(q)){var k;0==j&&this.g2d.drawLine(a,n,q,n-3*this.pd.scalingFactor,q);if(!(Math.abs(q-l)<=g))switch(l=q,j){case 0:k=JU.DF.formatDecimalDbl(m,c);this.mapX.put(p,k);break;case 1:k=this.mapX.get(p);
if(null==k)continue;k.startsWith("0")&&k.contains("E")&&(k="0");this.g2d.drawString(a,k,n-4*this.pd.scalingFactor-this.pd.getStringWidth(k),q+w(g/3))}}}}this.mapX.clear()},"~O,JSV.common.XYScaleConverter");c(c$,"drawXUnits",function(a){var b=this.spectra.get(0).getAxisLabel(!0);null!=b&&this.drawUnits(a,b,this.xPixel1+25*this.pd.scalingFactor,this.yPixel1+5*this.pd.scalingFactor,1,1)},"~O");c(c$,"drawUnits",function(a,b,d,c,g,e){this.setColorFromToken(a,JSV.common.ScriptToken.UNITSCOLOR);this.pd.setFont(a,
(null==this.imageView?this:this.imageView).getXPixels(),2,10,!1);this.g2d.drawString(a,b,w(d-this.pd.getStringWidth(b)*g),w(c+this.pd.getFontHeight()*e))},"~O,~S,~N,~N,~N,~N");c(c$,"drawYUnits",function(a){var b=this.spectra.get(0).getAxisLabel(!1);null!=b&&this.drawUnits(a,b,(this.pd.isPrinting?30:5)*this.pd.scalingFactor,this.yPixel0+(this.pd.isPrinting?0:5)*this.pd.scalingFactor,0,-1)},"~O");c(c$,"drawHighlightsAndPeakTabs",function(a,b,d){var c=this.getMeasurements(JSV.common.Annotation.AType.PeakList,
d),g=this.spectra.get(d);if(this.pd.isPrinting)null!=c&&(this.setColorFromToken(a,JSV.common.ScriptToken.PEAKTABCOLOR),this.printPeakList(a,g,c));else{if(null==c){for(var e=0;e<this.highlights.size();e++){var l=this.highlights.get(e);l.spectrum===g&&(this.pd.setHighlightColor(l.color),this.drawBar(b,null,l.x1,l.x2,JSV.common.ScriptToken.HIGHLIGHTCOLOR,0))}this.drawPeakTabs(a,b,g)}if(null!=c){b=g.isInverted()?this.yPixel1-10*this.pd.scalingFactor:this.yPixel0;this.setColorFromToken(a,JSV.common.ScriptToken.PEAKTABCOLOR);
for(e=c.size();0<=--e;)g=c.get(e),g=this.toPixelX(g.getXVal()),this.g2d.drawLine(a,g,b,g,b+10*this.pd.scalingFactor);this.isVisible(this.getDialog(JSV.common.Annotation.AType.PeakList,d))&&(b=this.toPixelY(c.getThresh()),b==this.fixY(b)&&!this.pd.isPrinting&&this.g2d.drawLine(a,this.xPixel0,b,this.xPixel1,b))}}},"~O,~O,~N");c(c$,"printPeakList",function(a,b,d){var c=d.getMeasurementListArray(null);if(0!=c.length){this.pd.setFont(a,this.xPixels,0,8,!1);for(var g=this.pd.getFontHeight(),e=G(d.size(),
0),l=G(d.size(),0),j=0,m=5*this.pd.scalingFactor,p=10*this.pd.scalingFactor,n=15*this.pd.scalingFactor,q=25*this.pd.scalingFactor,k=0;k<c.length;k++)l[k]=this.toPixelX(Double.parseDouble(c[k][1])),0==k?e[k]=l[k]:(e[k]=Math.max(e[k-1]+g,l[k]+g),j+=e[k]-l[k]);j/=2*c.length;e[0]-j<this.xPixel0+q&&(j=e[0]-(this.xPixel0+q));for(k=0;k<c.length;k++)e[k]-=j;k=b.isInverted();b=this.pd.getStringWidth("99.9999");for(var j=6<=c[0].length?this.pd.getStringWidth("99.99"):0,q=k?-1:1,r=(k?this.yPixel1:this.yPixel0)+
q*(j+b+n),k=0;k<c.length;k++)this.g2d.drawLine(a,e[k],r,e[k],r+m*q),this.g2d.drawLine(a,e[k],r+m*q,l[k],r+p*q),this.g2d.drawLine(a,l[k],r+p*q,l[k],r+n*q),0<j&&0<c[k][4].length&&this.g2d.drawLine(a,w((e[k]+e[k-1])/2),r-b+m,w((e[k]+e[k-1])/2),r-b-m);r-=2*q*this.pd.scalingFactor;0<j&&(this.drawStringRotated(a,-90,e[0]-n,r,"  ppm"),this.drawStringRotated(a,-90,e[0]-n,r-b-m," Hz"));for(k=d.size();0<=--k;)this.drawStringRotated(a,-90*q,e[k]+w(q*g/3),r,c[k][1]),0<j&&0<c[k][4].length&&(d=w((e[k]+e[k-1])/
2)+w(g/3),this.drawStringRotated(a,-90,d,r-b-m,c[k][4]))}},"~O,JSV.common.Spectrum,JSV.common.PeakData");c(c$,"drawStringRotated",function(a,b,d,c,g){this.g2d.drawStringRotated(a,g,d,c,b)},"~O,~N,~N,~N,~S");c(c$,"drawAnnotations",function(a,b,d){this.pd.setFont(a,this.xPixels,1,12,!1);for(var c=b.size();0<=--c;){var g=b.get(c);this.setAnnotationColor(a,g,d);var e=(g.is2D?this.imageView:this).toPixelX(g.getXVal()),l=g.isPixels()?w(this.yPixel0+10*this.pd.scalingFactor-g.getYVal()):g.is2D?this.imageView.subIndexToPixelY(w(g.getYVal())):
this.toPixelY(g.getYVal());this.g2d.drawString(a,g.text,e+g.offsetX*this.pd.scalingFactor,l-g.offsetY*this.pd.scalingFactor)}},"~O,JU.Lst,JSV.common.ScriptToken");c(c$,"drawIntegralValues",function(a,b,d){var c=this.getMeasurements(JSV.common.Annotation.AType.Integration,b);if(null!=c){this.pd.isPrinting?this.pd.setFont(a,this.xPixels,0,8,!1):this.pd.setFont(a,this.xPixels,1,12,!1);this.setColorFromToken(a,JSV.common.ScriptToken.INTEGRALPLOTCOLOR);var g=this.pd.getFontHeight();this.g2d.setStrokeBold(a,
!0);for(var e=c.size();0<=--e;){var l=c.get(e);if(0!=l.getValue()){var j=this.toPixelX(l.getXVal2()),m=d*this.pd.scalingFactor+this.toPixelYint(l.getYVal()),k=d*this.pd.scalingFactor+this.toPixelYint(l.getYVal2());j!=this.fixX(j)||(m!=this.fixY(m)||k!=this.fixY(k))||(this.pd.isPrinting||this.g2d.drawLine(a,j,m,j,k),this.g2d.drawString(a,"  "+l.text,j,w((m+k)/2)+w(g/3)))}}this.g2d.setStrokeBold(a,!1)}b==this.getFixedSelectedSpectrumIndex()&&(this.selectedSpectrumIntegrals=c)},"~O,~N,~N");c(c$,"drawMeasurements",
function(a,b){var d=this.getMeasurements(JSV.common.Annotation.AType.Measurements,b);if(null!=d)for(var c=d.size();0<=--c;)this.drawMeasurement(a,d.get(c));b==this.getFixedSelectedSpectrumIndex()&&(this.selectedSpectrumMeasurements=d)},"~O,~N");c(c$,"drawMeasurement",function(a,b){if(!(0==b.text.length&&b!==this.pendingMeasurement)){this.pd.setFont(a,this.xPixels,1,12,!1);this.g2d.setGraphicsColor(a,b===this.pendingMeasurement?this.pd.getColor(JSV.common.ScriptToken.PEAKTABCOLOR):this.pd.BLACK);var d=
this.toPixelX(b.getXVal()),c=this.toPixelY(b.getYVal()),g=this.toPixelX(b.getXVal2());if(!Double.isNaN(b.getXVal())&&!(d!=this.fixX(d)||g!=this.fixX(g))){var e=2<=Math.abs(d-g),l=this.getScale().isYZeroOnScale()&&b.spec.isHNMR(),j=w((d+g)/2);this.g2d.setStrokeBold(a,!0);e&&this.g2d.drawLine(a,d,c,g,c);l&&this.g2d.drawLine(a,d+1,this.yPixel1-1,g,this.yPixel1-1);this.g2d.setStrokeBold(a,!1);e&&this.g2d.drawString(a,b.text,j+b.offsetX,c-b.offsetY);l&&(this.g2d.drawLine(a,d,this.yPixel1,d,this.yPixel1-
6*this.pd.scalingFactor),this.g2d.drawLine(a,g,this.yPixel1,g,this.yPixel1-6*this.pd.scalingFactor))}}},"~O,JSV.common.Measurement");c(c$,"getPinSelected",function(a,b){if(null!=this.widgets)for(var d=0;d<this.widgets.length;d++)if(null!=this.widgets[d]&&this.widgets[d].isPinOrCursor&&this.widgets[d].selected(a,b))return this.widgets[d];return null},"~N,~N");c(c$,"set2DCrossHairs",function(a,b){var d;if(a==this.imageView.fixX(a)&&b==this.fixY(b)&&(this.pin1Dx1.setX(d=this.imageView.toX(a),this.toPixelX(d)),
this.cur2Dx1.setX(d,a),this.setCurrentSubSpectrum(this.imageView.toSubspectrumIndex(b)),this.isLinked)){var c=this.imageView.toY(b);this.pd.set2DCrossHairsLinked(this,d,c,!this.sticky2Dcursor)}},"~N,~N");c(c$,"reset2D",function(a){a?(this.imageView.setView0(this.imageView.xPixel0,this.pin2Dy0.yPixel0,this.imageView.xPixel1,this.pin2Dy1.yPixel0),this.doZoom(0,this.getScale().minY,0,this.getScale().maxY,!0,!1,!1,!1,!0)):this.imageView.setView0(this.pin2Dx0.xPixel0,this.imageView.yPixel0,this.pin2Dx1.xPixel0,
this.imageView.yPixel1)},"~B");c(c$,"setAnnotationText",function(a){var b=this.pd.getInput("New text?","Set Label",a.text);if(null==b)return!1;0==b.length?this.annotations.removeObj(a):a.text=b;return!0},"JSV.common.Annotation");c(c$,"checkIntegral",function(a,b,d){var c=this.getDialog(JSV.common.Annotation.AType.Integration,-1);null!=c&&(a=c.getData().addIntegralRegion(a,b),d&&u(c,JSV.dialog.JSVDialog)&&c.update(null,0,0),this.selectedSpectrumIntegrals=null,this.pendingIntegral=d?null:a)},"~N,~N,~B");
c(c$,"setToolTipForPixels",function(a,b){var d=this.getPinSelected(a,b),c=this.getScale().precision[0],g=this.getScale().precision[1];if(null!=d)this.setStartupPinTip()||(d===this.pin1Dx01||d===this.pin2Dx01?c=JU.DF.formatDecimalDbl(Math.min(this.pin1Dx0.getXVal(),this.pin1Dx1.getXVal()),c)+" - "+JU.DF.formatDecimalDbl(Math.max(this.pin1Dx0.getXVal(),this.pin1Dx1.getXVal()),c):d===this.pin1Dy01?c=JU.DF.formatDecimalDbl(Math.min(this.pin1Dy0.getYVal(),this.pin1Dy1.getYVal()),g)+" - "+JU.DF.formatDecimalDbl(Math.max(this.pin1Dy0.getYVal(),
this.pin1Dy1.getYVal()),g):d===this.cur2Dy?(d=this.imageView.toSubspectrumIndex(d.yPixel0),c=this.get2DYLabel(d,c)):c=d===this.pin2Dy01?""+w(Math.min(this.pin2Dy0.getYVal(),this.pin2Dy1.getYVal()))+" - "+w(Math.max(this.pin2Dy0.getYVal(),this.pin2Dy1.getYVal())):d.isXtype?JU.DF.formatDecimalDbl(d.getXVal(),c):d.is2D?""+w(d.getYVal()):JU.DF.formatDecimalDbl(d.getYVal(),g),this.pd.setToolTipText(c));else{if(null!=this.imageView){if(this.imageView.fixX(a)==a&&this.fixY(b)==b){d=this.imageView.toSubspectrumIndex(b);
c=JU.DF.formatDecimalDbl(this.imageView.toX(a),c)+" "+this.getSpectrum().getAxisLabel(!0)+",  "+this.get2DYLabel(d,c);this.pd.setToolTipText(this.pd.display1D?c:"");this.pd.coordStr=c;return}if(!this.pd.display1D){this.pd.setToolTipText("");this.pd.coordStr="";return}}var d=this.toX(this.fixX(a)),c=null!=this.imageView&&this.imageView.isXWithinRange(a)?this.imageView.toSubspectrumIndex(this.fixY(b)):this.toY(this.fixY(b)),g=this.setCoordStr(d,c),e=this.getFixedSelectedSpectrumIndex();this.isInPlotRegion(a,
b)?1!=this.nSpectra&&this.haveIntegralDisplayed(e)&&(c=this.getIntegrationGraph(e).getPercentYValueAt(d),g+=", "+JU.DF.formatDecimalDbl(c,1)):c=NaN;this.pd.setToolTipText(null!=this.pendingMeasurement||null!=this.selectedMeasurement||null!=this.selectedIntegral?this.pd.hasFocus()?"Press ESC to delete "+(null!=this.selectedIntegral?"integral, DEL to delete all visible, or N to normalize":null==this.pendingMeasurement?'"'+this.selectedMeasurement.text+'" or DEL to delete all visible':"measurement"):
"":Double.isNaN(c)?null:g)}},"~N,~N");c(c$,"setCoordStr",function(a,b){var d=JU.DF.formatDecimalDbl(a,this.getScale().precision[0]);this.pd.coordStr="("+d+(this.haveSingleYScale||0<=this.iSpectrumSelected?", "+JU.DF.formatDecimalDbl(b,this.getScale().precision[1]):"")+")";return d},"~N,~N");c(c$,"setStartupPinTip",function(){if(null==this.pd.startupPinTip)return!1;this.pd.setToolTipText(this.pd.startupPinTip);this.pd.startupPinTip=null;return!0});c(c$,"get2DYLabel",function(a,b){var d=this.getSpectrumAt(0).getSubSpectra().get(a);
return JU.DF.formatDecimalDbl(d.getY2D(),b)+(d.y2DUnits.equals("HZ")?" HZ ("+JU.DF.formatDecimalDbl(d.getY2DPPM(),b)+" PPM)":"")},"~N,~N");c(c$,"isOnSpectrum",function(a,b,d){var c=null,g=!0,e=0>d;if(e){c=this.getDialog(JSV.common.Annotation.AType.Integration,-1);if(null==c)return!1;c=c.getData().getXYCoords();d=this.getFixedSelectedSpectrumIndex()}else{this.setScale(d);var l=this.spectra.get(d),c=l.xyCoords,g=l.isContinuous()}var l=d*I(this.yPixels*(this.yStackOffsetPercent/100)),j=this.viewData.getStartingPointIndex(d);
d=this.viewData.getEndingPointIndex(d);if(g)for(g=j;g<d;g++){var m=c[g],k=c[g+1],j=this.toPixelX(m.getXVal()),p=this.toPixelX(k.getXVal()),m=e?this.toPixelYint(m.getYVal()):this.toPixelY(m.getYVal()),k=e?this.toPixelYint(k.getYVal()):this.toPixelY(k.getYVal());if(!(-2147483648==m||-2147483648==k))if(m=this.fixY(m)-l,k=this.fixY(k)-l,JSV.common.GraphSet.isOnLine(a,b,j,m,p,k))return!0}else for(g=j;g<=d;g++)if(e=c[g],k=this.toPixelY(e.getYVal()),-2147483648!=k&&(j=this.toPixelX(e.getXVal()),m=this.toPixelY(Math.max(this.getScale().minYOnScale,
0)),m=this.fixY(m),k=this.fixY(k),!(m==k&&(m==this.yPixel0||m==this.yPixel1))&&JSV.common.GraphSet.isOnLine(a,b,j,m,j,k)))return!0;return!1},"~N,~N,~N");c$.distance=c(c$,"distance",function(a,b){return Math.sqrt(a*a+b*b)},"~N,~N");c$.findCompatibleGraphSet=c(c$,"findCompatibleGraphSet",function(a,b){for(var d=0;d<a.size();d++)if(JSV.common.Spectrum.areXScalesCompatible(b,a.get(d).getSpectrum(),!1,!1))return a.get(d);return null},"JU.Lst,JSV.common.Spectrum");c$.isGoodEvent=c(c$,"isGoodEvent",function(a,
b,d){return null==b?5<Math.abs(a.xPixel1-a.xPixel0)&&5<Math.abs(a.yPixel1-a.yPixel0):d?5<Math.abs(a.xPixel0-b.xPixel0):5<Math.abs(a.yPixel0-b.yPixel0)},"JSV.common.PlotWidget,JSV.common.PlotWidget,~B");c$.isOnLine=c(c$,"isOnLine",function(a,b,d,c,g,e){var l=Math.abs(d-a);if(2>l&&2>Math.abs(c-b))return!0;var j=g-a;if(2>Math.abs(j)&&2>Math.abs(e-b))return!0;var m=c-e;if(2<Math.abs(m)&&c<b==e<b)return!1;var k=d-g;return 2<Math.abs(k)&&d<a==g<a?!1:JSV.common.GraphSet.distance(l,c-b)+JSV.common.GraphSet.distance(j,
b-e)<JSV.common.GraphSet.distance(k,m)+2},"~N,~N,~N,~N,~N,~N");c$.setFractionalPositions=c(c$,"setFractionalPositions",function(a,b,d){var c=b.size(),g=0,e=0;a.isLinked=d!==JSV.common.PanelData.LinkMode.NONE;if(d===JSV.common.PanelData.LinkMode.NONE){for(var l=0;l<c;l++)d=b.get(l),g+=(d.getSpectrumAt(0).is1D(),1)*d.nSplit;g=1/g;for(l=0;l<c;l++)d=b.get(l),d.isLinked=!1,a=d.getSpectrumAt(0).is1D()?g:1*g,d.fX0=0,d.fY0=e,d.fracX=1,d.fracY=a,e+=a*d.nSplit}else{var g=null,j=-1;if(2==c||3==c)for(l=0;l<c;l++)if(d=
b.get(l),!d.getSpectrum().is1D()){g=d;0<=j&&(l=-2);j=l;break}if(-2==j||-1==j&&2!=c)JSV.common.GraphSet.setFractionalPositions(a,b,JSV.common.PanelData.LinkMode.NONE);else for(l=0;l<c;l++)d=b.get(l),d.isLinked=!0,a=d.getSpectrumAt(0),a.is1D()?(null!=g&&(j=g.getSpectrumAt(0),JSV.common.Spectrum.areLinkableX(a,j)&&(d.gs2dLinkedX=g),JSV.common.Spectrum.areLinkableY(a,j)&&(d.gs2dLinkedY=g)),d.fX0=0,d.fY0=e,d.fracX=null==g?1:0.5,d.fracY=3==c||null==g?0.5:1,e+=0.5):(d.fX0=0.5,d.fY0=0,d.fracX=0.5,d.fracY=
1)}},"JSV.common.PanelData,JU.Lst,JSV.common.PanelData.LinkMode");c(c$,"addAnnotation",function(a,b){if(0==a.size()||1==a.size()&&a.get(0).equalsIgnoreCase("none"))return this.lastAnnotation=this.annotations=null;4>a.size()&&null==this.lastAnnotation&&(this.lastAnnotation=this.getAnnotation((this.getScale().maxXOnScale+this.getScale().minXOnScale)/2,(this.getScale().maxYOnScale+this.getScale().minYOnScale)/2,b,!1,!1,0,0));var d=this.getAnnotation(a,this.lastAnnotation);if(null==d)return null;if(null==
this.annotations&&1==a.size()&&'"'==a.get(0).charAt(0))return d=d.text,this.getSpectrum().setTitle(d),d;this.lastAnnotation=d;this.addAnnotation(d,!1);return null},"JU.Lst,~S");c(c$,"addHighlight",function(a,b,d,c){null==d&&(d=this.getSpectrumAt(0));a=D(JSV.common.GraphSet.Highlight,this,null,a,b,d,null==c?this.pd.getColor(JSV.common.ScriptToken.HIGHLIGHTCOLOR):c);this.highlights.contains(a)||this.highlights.addLast(a)},"~N,~N,JSV.common.Spectrum,javajs.api.GenericColor");c(c$,"addPeakHighlight",
function(a){for(var b=this.spectra.size();0<=--b;){var d=this.spectra.get(b);this.removeAllHighlights(d);if(!(null==a||a.isClearAll()||d!==a.spectrum)){var c=a.toString();if(null!=c){var g=JU.PT.getQuotedAttribute(c,"xMin"),c=JU.PT.getQuotedAttribute(c,"xMax");if(null==g||null==c)break;g=JU.PT.parseFloat(g);c=JU.PT.parseFloat(c);if(Float.isNaN(g)||Float.isNaN(c))break;this.pd.addHighlight(this,g,c,d,200,140,140,100);d.setSelectedPeak(a);!this.getScale().isInRangeX(g)&&!(this.getScale().isInRangeX(c)||
g<this.getScale().minX&&this.getScale().maxX<c)&&this.setZoomTo(0)}}}},"JSV.common.PeakInfo");c(c$,"advanceSubSpectrum",function(a){var b=this.getSpectrumAt(0);a=b.advanceSubSpectrum(a);b.isForcedSubset()&&this.viewData.setXRangeForSubSpectrum(this.getSpectrum().getXYCoords());this.pd.notifySubSpectrumChange(a,this.getSpectrum())},"~N");c(c$,"checkSpectrumClickedEvent",function(a,b,d){if(this.nextClickForSetPeak)return!1;if(0<d&&this.checkArrowLeftRightClick(a,b))return!0;if(1<d||(null!=this.pendingMeasurement||
!this.isInPlotRegion(a,b))||0==d&&(d=this.isOnSpectrum(a,b,-1),this.pd.integralShiftMode=d?this.getShiftMode(a,b):0,this.pd.isIntegralDrag=0==this.pd.integralShiftMode&&(d||this.haveIntegralDisplayed(-1)&&null!=this.findMeasurement(this.getIntegrationGraph(-1),a,b,0)),0!=this.pd.integralShiftMode)||!this.showAllStacked)return!1;this.stackSelected=!1;for(d=0;d<this.nSpectra;d++)if(this.isOnSpectrum(a,b,d))return this.setSpectrumClicked(this.iPreviousSpectrumClicked=d),!1;if(this.isDialogOpen())return!1;
this.setSpectrumClicked(-1);return this.stackSelected=!1},"~N,~N,~N");c(c$,"getShiftMode",function(a,b){return this.isStartEndIntegral(a,!1)?b:this.isStartEndIntegral(a,!0)?-b:0},"~N,~N");c(c$,"isDialogOpen",function(){return this.isVisible(this.getDialog(JSV.common.Annotation.AType.Integration,-1))||this.isVisible(this.getDialog(JSV.common.Annotation.AType.Measurements,-1))||this.isVisible(this.getDialog(JSV.common.Annotation.AType.PeakList,-1))});c(c$,"isStartEndIntegral",function(a,b){return b?
20>this.xPixelPlot1-a:20>a-this.xPixelPlot0},"~N,~B");c(c$,"checkWidgetEvent",function(a,b,d){if(this.zoomEnabled&&this.triggered)if(this.triggered=!1,d)2==this.pd.clickCount&&null==this.pendingMeasurement?(-1==this.iSpectrumClicked&&0<=this.iPreviousSpectrumClicked&&this.setSpectrumClicked(this.iPreviousSpectrumClicked),this.processPendingMeasurement(a,b,2)):null==this.pendingMeasurement&&(d=this.getPinSelected(a,b),null==d&&(b=this.fixY(b),a<this.xPixel1?(this.pd.shiftPressed&&this.setSpectrumClicked(this.iPreviousSpectrumClicked),
a=this.fixX(a),this.zoomBox1D.setX(this.toX(a),a),this.zoomBox1D.yPixel0=b,d=this.zoomBox1D):null!=this.imageView&&a<this.imageView.xPixel1&&(this.zoomBox2D.setX(this.imageView.toX(a),this.imageView.fixX(a)),this.zoomBox2D.yPixel0=b,d=this.zoomBox2D)),this.pd.thisWidget=d);else if(this.nextClickForSetPeak=!1,d=this.pd.thisWidget,null!=d)if(d===this.zoomBox1D)this.zoomBox1D.xPixel1=this.fixX(a),this.zoomBox1D.yPixel1=this.fixY(b),this.pd.isIntegralDrag&&this.zoomBox1D.xPixel0!=this.zoomBox1D.xPixel1&&
this.checkIntegral(this.zoomBox1D.getXVal(),this.toX(this.zoomBox1D.xPixel1),!1);else if(d===this.zoomBox2D)this.zoomBox2D.xPixel1=this.imageView.fixX(a),this.zoomBox2D.yPixel1=this.fixY(b);else if(d===this.cur2Dy)b=this.fixY(b),this.cur2Dy.yPixel0=this.cur2Dy.yPixel1=b,this.setCurrentSubSpectrum(this.imageView.toSubspectrumIndex(b));else if(!(d===this.cur2Dx0||d===this.cur2Dx1))if(d===this.pin1Dx0||d===this.pin1Dx1||d===this.pin1Dx01){a=this.fixX(a);d.setX(this.toX0(a),a);if(d===this.pin1Dx01){d=
a-w((this.pin1Dx0.xPixel0+this.pin1Dx1.xPixel0)/2);a=this.pin1Dx0.xPixel0+d;b=this.pin1Dx1.xPixel0+d;if(0==d||this.fixX(a)!=a||this.fixX(b)!=b)return;this.pin1Dx0.setX(this.toX0(a),a);this.pin1Dx1.setX(this.toX0(b),b)}this.doZoom(this.pin1Dx0.getXVal(),0,this.pin1Dx1.getXVal(),0,!0,!1,!1,!0,!1)}else if(d===this.pin1Dy0||d===this.pin1Dy1||d===this.pin1Dy01){b=this.fixY(b);d.setY(this.toY0(b),b);if(d===this.pin1Dy01){d=b-w((this.pin1Dy0.yPixel0+this.pin1Dy1.yPixel0)/2)+1;b=this.pin1Dy0.yPixel0+d;a=
this.pin1Dy1.yPixel0+d;d=this.toY0(b);var c=this.toY0(a);if(Math.min(d,c)==this.getScale().minY||Math.max(d,c)==this.getScale().maxY)return;this.pin1Dy0.setY(d,b);this.pin1Dy1.setY(c,a)}this.doZoom(0,this.pin1Dy0.getYVal(),0,this.pin1Dy1.getYVal(),null==this.imageView,null==this.imageView,!1,!1,!1)}else if(d===this.pin2Dx0||d===this.pin2Dx1||d===this.pin2Dx01){a=this.imageView.fixX(a);d.setX(this.imageView.toX0(a),a);if(d===this.pin2Dx01){d=a-w((this.pin2Dx0.xPixel0+this.pin2Dx1.xPixel0)/2)+1;a=this.pin2Dx0.xPixel0+
d;b=this.pin2Dx1.xPixel0+d;if(this.imageView.fixX(a)!=a||this.imageView.fixX(b)!=b)return;this.pin2Dx0.setX(this.imageView.toX0(a),a);this.pin2Dx1.setX(this.imageView.toX0(b),b)}JSV.common.GraphSet.isGoodEvent(this.pin2Dx0,this.pin2Dx1,!0)?(this.imageView.setView0(this.pin2Dx0.xPixel0,this.pin2Dy0.yPixel0,this.pin2Dx1.xPixel0,this.pin2Dy1.yPixel0),this.doZoom(this.pin2Dx0.getXVal(),this.getScale().minY,this.pin2Dx1.getXVal(),this.getScale().maxY,!1,!1,!1,!0,!1)):this.reset2D(!0)}else if(d===this.pin2Dy0||
d===this.pin2Dy1||d===this.pin2Dy01){b=this.fixY(b);d.setY(this.imageView.toSubspectrumIndex(b),b);if(d===this.pin2Dy01){d=b-w((this.pin2Dy0.yPixel0+this.pin2Dy1.yPixel0)/2)+1;b=this.pin2Dy0.yPixel0+d;a=this.pin2Dy1.yPixel0+d;if(b!=this.fixY(b)||a!=this.fixY(a))return;this.pin2Dy0.setY(this.imageView.toSubspectrumIndex(b),b);this.pin2Dy1.setY(this.imageView.toSubspectrumIndex(a),a)}JSV.common.GraphSet.isGoodEvent(this.pin2Dy0,this.pin2Dy1,!1)?this.imageView.setView0(this.pin2Dx0.xPixel0,this.pin2Dy0.yPixel0,
this.pin2Dx1.xPixel1,this.pin2Dy1.yPixel1):this.reset2D(!1)}},"~N,~N,~B");c(c$,"clearIntegrals",function(){this.checkIntegral(NaN,0,!1)});c(c$,"clearMeasurements",function(){this.removeDialog(this.getFixedSelectedSpectrumIndex(),JSV.common.Annotation.AType.Measurements)});c$.createGraphSetsAndSetLinkMode=c(c$,"createGraphSetsAndSetLinkMode",function(a,b,d,c,g,e){for(var l=new JU.Lst,j=0;j<d.size();j++){var m=d.get(j),k=e===JSV.common.PanelData.LinkMode.NONE?JSV.common.GraphSet.findCompatibleGraphSet(l,
m):null;null==k&&l.addLast(k=new JSV.common.GraphSet(b.getPanelData()));k.addSpec(m)}JSV.common.GraphSet.setFractionalPositions(a,l,e);for(j=l.size();0<=--j;)l.get(j).initGraphSet(c,g),JU.Logger.info("JSVGraphSet "+(j+1)+" nSpectra = "+l.get(j).nSpectra);return l},"JSV.common.PanelData,JSV.api.JSVPanel,JU.Lst,~N,~N,JSV.common.PanelData.LinkMode");c(c$,"drawGraphSet",function(a,b,d,c,g,e,l,j,m,k,p){this.zoomEnabled=this.pd.getBoolean(JSV.common.ScriptToken.ENABLEZOOM);this.height=g*this.pd.scalingFactor;
this.width=c*this.pd.scalingFactor;this.left=e*this.pd.scalingFactor;this.right=l*this.pd.scalingFactor;this.top=j*this.pd.scalingFactor;this.bottom=m*this.pd.scalingFactor;this.$haveSelectedSpectrum=!1;this.selectedSpectrumMeasurements=this.selectedSpectrumIntegrals=null;if(!this.pd.isPrinting&&null!=this.widgets)for(c=0;c<this.widgets.length;c++)null!=this.widgets[c]&&(this.widgets[c].isVisible=!1);for(c=0;c<this.nSplit;c++)this.setPositionForFrame(c),this.drawAll(a,b,d,c,k||1<this.nSplit,p);this.setPositionForFrame(1<
this.nSplit?this.pd.currentSplitPoint:0)},"~O,~O,~O,~N,~N,~N,~N,~N,~N,~B,~B");c(c$,"escapeKeyPressed",function(a){null!=this.zoomBox1D&&(this.zoomBox1D.xPixel0=this.zoomBox1D.xPixel1=0);null!=this.zoomBox2D&&(this.zoomBox2D.xPixel0=this.zoomBox2D.xPixel1=0);this.inPlotMove&&(null!=this.pendingMeasurement?this.pendingMeasurement=null:(this.pendingMeasurement=this.pd.thisWidget=null,null!=this.selectedSpectrumMeasurements&&null!=this.selectedMeasurement&&(a?this.selectedSpectrumMeasurements.clear(this.getScale().minXOnScale,
this.getScale().maxXOnScale):this.selectedSpectrumMeasurements.removeObj(this.selectedMeasurement),this.selectedMeasurement=null,this.updateDialog(JSV.common.Annotation.AType.Measurements,-1)),null!=this.selectedSpectrumIntegrals&&null!=this.selectedIntegral&&(a?this.selectedSpectrumIntegrals.clear(this.getScale().minXOnScale,this.getScale().maxXOnScale):this.selectedSpectrumIntegrals.removeObj(this.selectedIntegral),this.selectedIntegral=null,this.updateDialog(JSV.common.Annotation.AType.Integration,
-1))))},"~B");c$.findGraphSet=c(c$,"findGraphSet",function(a,b,d){for(var c=a.size();0<=--c;)if(a.get(c).hasPoint(b,d))return a.get(c);return null},"JU.Lst,~N,~N");c(c$,"findMatchingPeakInfo",function(a){for(var b=null,d=0;d<this.spectra.size()&&null==(b=this.spectra.get(d).findMatchingPeakInfo(a));d++);return b},"JSV.common.PeakInfo");c(c$,"getCurrentSpectrumIndex",function(){return 1==this.nSpectra?0:this.iSpectrumSelected});c(c$,"getSelectedIntegral",function(){return this.selectedIntegral});c(c$,
"getShowAnnotation",function(a,b){var d=this.getDialog(a,b);return null!=d&&d.getState()},"JSV.common.Annotation.AType,~N");c(c$,"hasFileLoaded",function(a){for(var b=this.spectra.size();0<=--b;)if(this.spectra.get(b).getFilePathForwardSlash().equals(a))return!0;return!1},"~S");c(c$,"haveSelectedSpectrum",function(){return this.$haveSelectedSpectrum});c(c$,"mouseClickedEvent",function(a,b,d,c){this.selectedIntegral=this.selectedMeasurement=null;var g=this.nextClickForSetPeak;this.nextClickForSetPeak=
!1;if(!this.checkArrowUpDownClick(a,b))if(this.lastClickX=NaN,this.lastPixelX=2147483647,this.isSplitWidget(a,b))this.splitStack(this.pd.graphSets,1==this.nSplit);else{var e=this.getPinSelected(a,b);if(null!=e)this.setWidgetValueByUser(e);else if(e=null!=this.imageView&&a==this.imageView.fixX(a)&&b==this.fixY(b),2==d&&(-1==this.iSpectrumClicked&&0<=this.iPreviousSpectrumClicked)&&this.setSpectrumClicked(this.iPreviousSpectrumClicked),!e&&c)this.setSpectrumClicked(this.iPreviousSpectrumClicked),null!=
this.pendingMeasurement?this.processPendingMeasurement(a,b,-3):0<=this.iSpectrumClicked&&this.processPendingMeasurement(a,b,3);else if(this.lastXMax=NaN,2==d)e?(this.sticky2Dcursor&&this.addAnnotation(this.getAnnotation(this.imageView.toX(a),this.imageView.toSubspectrumIndex(b),this.pd.coordStr,!1,!0,5,5),!0),this.sticky2Dcursor=!this.sticky2Dcursor,this.set2DCrossHairs(a,b)):this.isInTopBar(a,b)?this.doZoom(this.toX0(this.xPixel0),0,this.toX0(this.xPixel1),0,!0,!1,!1,!0,!0):this.isInRightBar(a,b)?
this.doZoom(this.getScale().minXOnScale,this.viewList.get(0).getScale().minYOnScale,this.getScale().maxXOnScale,this.viewList.get(0).getScale().maxYOnScale,!0,!0,!1,!1,!1):this.isInTopBar2D(a,b)?this.reset2D(!0):this.isInRightBar2D(a,b)?this.reset2D(!1):null!=this.pendingMeasurement?this.processPendingMeasurement(a,b,-2):0<=this.iSpectrumClicked&&this.processPendingMeasurement(a,b,2);else if(e){if(null!=this.annotations&&(d=(new JSV.common.Coordinate).set(this.imageView.toX(a),this.imageView.toSubspectrumIndex(b)),
d=this.findAnnotation2D(d),null!=d&&this.setAnnotationText(d)))return;this.sticky2Dcursor=!1;this.set2DCrossHairs(a,b)}else{if(this.isInPlotRegion(a,b)){if(null!=this.selectedSpectrumIntegrals&&this.checkIntegralNormalizationClick(a,b))return;if(null!=this.pendingMeasurement){this.processPendingMeasurement(a,b,1);return}this.setCoordClicked(a,this.toX(a),this.toY(b));this.updateDialog(JSV.common.Annotation.AType.PeakList,-1);if(g){this.shiftSpectrum(NaN,NaN);return}}else this.setCoordClicked(0,NaN,
0);this.pd.notifyPeakPickedListeners(null)}}},"~N,~N,~N,~B");c(c$,"updateDialog",function(a,b){var d=this.getDialog(a,b);if(null!=d&&this.isVisible(d)){var c=this.toX(this.xPixel1)-this.toX(this.xPixel0),g=this.getSpectrum().isInverted()?this.yPixel1-this.pd.mouseY:this.pd.mouseY-this.yPixel0;d.update(this.pd.coordClicked,c,g)}},"JSV.common.Annotation.AType,~N");c(c$,"isVisible",function(a){return u(a,JSV.dialog.JSVDialog)&&a.isVisible()},"JSV.api.AnnotationData");c(c$,"mouseReleasedEvent",function(a,
b){if(null!=this.pendingMeasurement)2>Math.abs(this.toPixelX(this.pendingMeasurement.getXVal())-a)&&(this.pendingMeasurement=null),this.processPendingMeasurement(a,b,-2),this.setToolTipForPixels(a,b);else if(0!=this.pd.integralShiftMode)this.pd.integralShiftMode=0,this.zoomBox1D.xPixel1=this.zoomBox1D.xPixel0;else{0<=this.iSpectrumMovedTo&&this.setScale(this.iSpectrumMovedTo);var d=this.pd.thisWidget;if(this.pd.isIntegralDrag)JSV.common.GraphSet.isGoodEvent(this.zoomBox1D,null,!0)&&this.checkIntegral(this.toX(this.zoomBox1D.xPixel0),
this.toX(this.zoomBox1D.xPixel1),!0),this.zoomBox1D.xPixel1=this.zoomBox1D.xPixel0=0,this.pendingIntegral=null,this.pd.isIntegralDrag=!1;else if(d===this.zoomBox2D)JSV.common.GraphSet.isGoodEvent(this.zoomBox2D,null,!0)&&(this.imageView.setZoom(this.zoomBox2D.xPixel0,this.zoomBox2D.yPixel0,this.zoomBox2D.xPixel1,this.zoomBox2D.yPixel1),this.zoomBox2D.xPixel1=this.zoomBox2D.xPixel0,this.doZoom(this.imageView.toX(this.imageView.xPixel0),this.getScale().minY,this.imageView.toX(this.imageView.xPixel0+
this.imageView.xPixels-1),this.getScale().maxY,!1,!1,!1,!0,!0));else if(d===this.zoomBox1D){if(JSV.common.GraphSet.isGoodEvent(this.zoomBox1D,null,!0)){var d=this.zoomBox1D.xPixel1,c=this.pd.shiftPressed;this.doZoom(this.toX(this.zoomBox1D.xPixel0),c?this.toY(this.zoomBox1D.yPixel0):0,this.toX(d),c?this.toY(this.zoomBox1D.yPixel1):0,!0,c,!0,!0,!0);this.zoomBox1D.xPixel1=this.zoomBox1D.xPixel0}}else(d===this.pin1Dx0||d===this.pin1Dx1||d===this.cur2Dx0||d===this.cur2Dx1)&&this.addCurrentZoom()}},"~N,~N");
c(c$,"mouseMovedEvent",function(a,b){if(1<this.nSpectra){var d=this.getSplitPoint(b);this.setPositionForFrame(d);this.setSpectrumMovedTo(1<this.nSplit?d:this.iSpectrumSelected);0<=this.iSpectrumMovedTo&&this.setScale(this.iSpectrumMovedTo)}this.inPlotMove=this.isInPlotRegion(a,b);this.setXPixelMovedTo(1.7976931348623157E308,1.7976931348623157E308,this.inPlotMove?a:-1,-1);this.inPlotMove&&(this.xValueMovedTo=this.toX(this.xPixelMovedTo),this.yValueMovedTo=this.getSpectrum().getYValueAt(this.xValueMovedTo));
if(0!=this.pd.integralShiftMode){var d=this.getDialog(JSV.common.Annotation.AType.Integration,-1),c=d.getData().getXYCoords(),c=c[0<this.pd.integralShiftMode?c.length-1:0].getYVal();d.getData().shiftY(this.pd.integralShiftMode,this.toPixelYint(c)+b-(0<this.pd.integralShiftMode?this.yPixelPlot1:this.yPixelPlot0),this.yPixel0,this.yPixels)}else this.pd.isIntegralDrag||(null!=this.pendingMeasurement?(this.processPendingMeasurement(a,b,0),this.setToolTipForPixels(a,b)):(this.selectedMeasurement=this.inPlotMove&&
null!=this.selectedSpectrumMeasurements?this.findMeasurement(this.selectedSpectrumMeasurements,a,b,0):null,this.selectedIntegral=null,this.inPlotMove&&(null!=this.selectedSpectrumIntegrals&&null==this.selectedMeasurement)&&(this.selectedIntegral=this.findMeasurement(this.selectedSpectrumIntegrals,a,b,0),null==this.selectedIntegral&&(this.selectedIntegral=this.findMeasurement(this.selectedSpectrumIntegrals,a,b,-5))),this.setToolTipForPixels(a,b),null==this.imageView?(this.piMouseOver=null,d=1<this.nSplit?
this.iSpectrumMovedTo:this.iSpectrumClicked,!this.isDrawNoSpectra()&&0<=d&&(d=this.spectra.get(d),null!=d.getPeakList()&&(this.coordTemp.setXVal(this.toX(a)),this.coordTemp.setYVal(this.toY(b)),this.piMouseOver=d.findPeakByCoord(a,this.coordTemp)))):!this.pd.display1D&&this.sticky2Dcursor&&this.set2DCrossHairs(a,b)))},"~N,~N");c(c$,"nextView",function(){this.currentZoomIndex+1<this.viewList.size()&&this.setZoomTo(this.currentZoomIndex+1)});c(c$,"previousView",function(){0<this.currentZoomIndex&&this.setZoomTo(this.currentZoomIndex-
1)});c(c$,"resetView",function(){this.setZoomTo(0)});c(c$,"removeAllHighlights",function(){this.removeAllHighlights(null)});c(c$,"removeHighlight",function(a){this.highlights.remove(a)},"~N");c(c$,"removeHighlight",function(a,b){for(var d=this.highlights.size();0<=--d;){var c=this.highlights.get(d);c.x1==a&&c.x2==b&&this.highlights.remove(d)}},"~N,~N");c(c$,"scaleYBy",function(a){if(null!=this.imageView||this.zoomEnabled)this.viewData.scaleSpectrum(null==this.imageView?this.iSpectrumSelected:-2,a),
null!=this.imageView&&(this.update2dImage(!1),this.resetPinsFromView()),this.pd.refresh()},"~N");c(c$,"selectSpectrum",function(a,b,d){for(var c=!1,g=this.spectra.size();0<=--g;)if((null==a||this.getSpectrumAt(g).getFilePathForwardSlash().equals(a))&&this.getSpectrumAt(g).matchesPeakTypeModel(b,d))this.setSpectrumSelected(g),1<this.nSplit&&this.splitStack(this.pd.graphSets,!0),c=!0;1<this.nSpectra&&(!c&&0<=this.iSpectrumSelected&&!this.pd.isCurrentGraphSet(this))&&this.setSpectrumSelected(-2147483648);
return c},"~S,~S,~S");c(c$,"selectPeakByFileIndex",function(a,b,d){for(var c,g=this.spectra.size();0<=--g;)if(null!=(c=this.getSpectrumAt(g).selectPeakByFileIndex(a,b,d)))return c;return null},"~S,~S,~S");c(c$,"setSelected",function(a){0>a?(this.bsSelected.clearAll(),this.setSpectrumClicked(-1)):(this.bsSelected.set(a),this.setSpectrumClicked(1==this.bsSelected.cardinality()?a:-1),1<this.nSplit&&0<=a&&(this.pd.currentSplitPoint=a))},"~N");c(c$,"setSelectedIntegral",function(a){var b=this.selectedIntegral.getSpectrum();
this.getIntegrationGraph(this.getSpectrumIndex(b)).setSelectedIntegral(this.selectedIntegral,a)},"~N");c(c$,"setShowAnnotation",function(a,b){var d=this.getDialog(a,-1);if(null==d)null!=b&&b!==Boolean.TRUE||(a===JSV.common.Annotation.AType.PeakList||a===JSV.common.Annotation.AType.Integration||a===JSV.common.Annotation.AType.Measurements)&&this.pd.showDialog(a);else if(null==b)u(d,JSV.dialog.JSVDialog)?d.setVisible(!1):d.setState(!d.getState());else{var c=b.booleanValue();d.setState(c);(c||u(d,JSV.dialog.JSVDialog))&&
this.pd.showDialog(a)}},"JSV.common.Annotation.AType,Boolean");c(c$,"checkIntegral",function(a,b){if(!this.getSpectrum().canIntegrate()||this.reversePlot)return!1;var d=this.getFixedSelectedSpectrumIndex(),c=this.getDialog(JSV.common.Annotation.AType.Integration,-1);if(null==b)return!0;switch(JSV.common.IntegralData.IntMode.getMode(b.toUpperCase())){case JSV.common.IntegralData.IntMode.ON:this.integrate(d,a);break;case JSV.common.IntegralData.IntMode.OFF:this.integrate(d,null);break;case JSV.common.IntegralData.IntMode.TOGGLE:this.integrate(d,
null==c?a:null);break;case JSV.common.IntegralData.IntMode.AUTO:null==c&&(this.checkIntegral(a,"ON"),c=this.getDialog(JSV.common.Annotation.AType.Integration,-1));null!=c&&c.getData().autoIntegrate();break;case JSV.common.IntegralData.IntMode.LIST:this.pd.showDialog(JSV.common.Annotation.AType.Integration);break;case JSV.common.IntegralData.IntMode.MARK:null==c&&(this.checkIntegral(a,"ON"),c=this.getDialog(JSV.common.Annotation.AType.Integration,-1));null!=c&&c.getData().addMarks(b.substring(4).trim());
break;case JSV.common.IntegralData.IntMode.MIN:if(null!=c)try{var g=Double.parseDouble(JSV.common.ScriptToken.getTokens(b).get(1));c.getData().setMinimumIntegral(g)}catch(e){if(!A(e,Exception))throw e;}break;case JSV.common.IntegralData.IntMode.UPDATE:null!=c&&c.getData().update(a)}this.updateDialog(JSV.common.Annotation.AType.Integration,-1);return!0},"JSV.common.Parameters,~S");c(c$,"setSpectrum",function(a,b){b&&1<this.nSplit?1<this.nSplit&&this.setSpectrumClicked(a):(this.setSpectrumClicked(a),
this.showAllStacked=this.stackSelected=!1);0<=a&&this.dialogsToFront(this.getSpectrum())},"~N,~B");c(c$,"setSpectrumJDX",function(a){var b=this.getFixedSelectedSpectrumIndex();this.spectra.remove(b);this.spectra.add(b,a);this.pendingMeasurement=null;this.clearViews();this.viewData.newSpectrum(this.spectra)},"JSV.common.Spectrum");c(c$,"setZoom",function(a,b,d,c){this.setZoomTo(0);0==a&&0==d&&0==b&&0==c?(this.newPins(),this.imageView=null,this.getScale(),this.getScale()):this.doZoom(a,b,d,c,!0,b!=
c,!1,!0,!0)},"~N,~N,~N,~N");c(c$,"shiftSpectrum",function(a,b){var d=this.getSpectrum();if(!d.isNMR()||!d.is1D())return!1;if(1.7976931348623157E308==b||1.7976931348623157E308==a)a=-d.addSpecShift(0);else{if(4.9E-324==b)return this.nextClickForSetPeak=!0,this.jsvp.showMessage("Click on or beside a peak to set its chemical shift.","Set Reference"),!1;if(Double.isNaN(a)||4.9E-324==a){var c=4.9E-324==a?this.lastClickX:this.getNearestPeak(d,this.lastClickX,this.toY(this.pd.mouseY));if(Double.isNaN(c))return!1;
if(Double.isNaN(b))try{var g=this.pd.getInput("New chemical shift (set blank to reset)","Set Reference",""+c).trim();b=0==g.length?c-d.addSpecShift(0):Double.parseDouble(g)}catch(e){if(A(e,Exception))return!1;throw e;}a=b-c}}if(0==a)return!1;d.addSpecShift(a);if(null!=this.annotations)for(c=this.annotations.size();0<=--c;)this.annotations.get(c).spec===d&&this.annotations.get(c).addSpecShift(a);if(null!=this.dialogs)for(var l,c=this.dialogs.entrySet().iterator();c.hasNext()&&((l=c.next())||1);)l.getValue().getSpectrum()===
d&&l.getValue().setSpecShift(a);this.getScale().addSpecShift(a);Double.isNaN(this.lastClickX)||(this.lastClickX+=a);this.updateDialogs();this.doZoom(0,this.getScale().minYOnScale,0,this.getScale().maxYOnScale,!0,!0,!1,!0,!1);this.pd.repaint();return!0},"~N,~N");c(c$,"toPeak",function(a){a*=this.drawXAxisLeftToRight?1:-1;Double.isNaN(this.lastClickX)&&(this.lastClickX=this.lastPixelX=0);var b=this.getSpectrum(),d=this.setCoordClicked(this.lastPixelX,this.lastClickX,0);a=b.setNextPeak(d,a);0>a||(a=
b.getPeakList().get(a),b.setSelectedPeak(a),this.setCoordClicked(a.getXPixel(),a.getX(),0),this.pd.notifyPeakPickedListeners(new JSV.common.PeakPickEvent(this.jsvp,this.pd.coordClicked,a)))},"~N");c(c$,"scaleSelectedBy",function(a){for(var b=this.bsSelected.nextSetBit(0);0<=b;b=this.bsSelected.nextSetBit(b+1))this.viewData.scaleSpectrum(b,a)},"~N");e(c$,"toString",function(){return"gs: "+this.nSpectra+" "+this.spectra+" "+this.spectra.get(0).getFilePath()});c(c$,"setXPointer",function(a,b){null!=
a&&this.setSpectrumClicked(this.getSpectrumIndex(a));this.xValueMovedTo=this.lastClickX=b;this.lastPixelX=this.toPixelX(b);this.setXPixelMovedTo(b,1.7976931348623157E308,0,0);this.yValueMovedTo=NaN},"JSV.common.Spectrum,~N");c(c$,"setXPointer2",function(a,b){null!=a&&this.setSpectrumClicked(this.getSpectrumIndex(a));this.setXPixelMovedTo(1.7976931348623157E308,b,0,0)},"JSV.common.Spectrum,~N");c(c$,"hasCurrentMeasurement",function(a){return null!=(a===JSV.common.Annotation.AType.Integration?this.selectedSpectrumIntegrals:
this.selectedSpectrumMeasurements)},"JSV.common.Annotation.AType");c(c$,"getDialog",function(a,b){-1==b&&(b=this.getCurrentSpectrumIndex());return null==this.dialogs||0>b?null:this.dialogs.get(a+"_"+b)},"JSV.common.Annotation.AType,~N");c(c$,"removeDialog",function(a,b){null!=this.dialogs&&0<=a&&this.dialogs.remove(b+"_"+a)},"~N,JSV.common.Annotation.AType");c(c$,"addDialog",function(a,b,d){null==this.dialogs&&(this.dialogs=new java.util.Hashtable);a=b+"_"+a;d.setGraphSetKey(a);this.dialogs.put(a,
d);return d},"~N,JSV.common.Annotation.AType,JSV.api.AnnotationData");c(c$,"removeDialog",function(a){var b=a.getGraphSetKey();this.dialogs.remove(b);a=a.getData();null!=a&&this.dialogs.put(b,a)},"JSV.dialog.JSVDialog");c(c$,"getPeakListing",function(a,b,d){0>a&&(a=this.getCurrentSpectrumIndex());if(0>a)return null;var c=this.getDialog(JSV.common.Annotation.AType.PeakList,-1);if(null==c){if(!d)return null;this.addDialog(a,JSV.common.Annotation.AType.PeakList,c=new JSV.common.PeakData(JSV.common.Annotation.AType.PeakList,
this.getSpectrum()))}c.getData().setPeakList(b,-2147483648,this.viewData.getScale());u(c,JSV.dialog.JSVDialog)&&c.setFields();return c.getData()},"~N,JSV.common.Parameters,~B");c(c$,"setPeakListing",function(a){var b=this.getDialog(JSV.common.Annotation.AType.PeakList,-1),d=u(b,JSV.dialog.JSVDialog)?b:null;(null==a?null==d||!d.isVisible():a.booleanValue())?this.pd.showDialog(JSV.common.Annotation.AType.PeakList):u(b,JSV.dialog.JSVDialog)&&b.setVisible(!1)},"Boolean");c(c$,"haveIntegralDisplayed",
function(a){a=this.getDialog(JSV.common.Annotation.AType.Integration,a);return null!=a&&a.getState()},"~N");c(c$,"getIntegrationGraph",function(a){a=this.getDialog(JSV.common.Annotation.AType.Integration,a);return null==a?null:a.getData()},"~N");c(c$,"setIntegrationRatios",function(a){var b=this.getFixedSelectedSpectrumIndex();null==this.aIntegrationRatios&&(this.aIntegrationRatios=Array(this.nSpectra));this.aIntegrationRatios[b]=JSV.common.IntegralData.getIntegrationRatiosFromString(this.getSpectrum(),
a)},"~S");c(c$,"getIntegrationRatios",function(a){return null==this.aIntegrationRatios?null:this.aIntegrationRatios[a]},"~N");c(c$,"integrate",function(a,b){var d=this.getSpectrumAt(a);if(null==b||!d.canIntegrate())return this.removeDialog(a,JSV.common.Annotation.AType.Integration),!1;this.addDialog(a,JSV.common.Annotation.AType.Integration,new JSV.common.IntegralData(d,b));return!0},"~N,JSV.common.Parameters");c(c$,"getIntegration",function(a,b,d){0>a&&(a=this.getCurrentSpectrumIndex());if(0>a)return null;
var c=this.getDialog(JSV.common.Annotation.AType.Integration,-1);if(null==c){if(!d)return null;c=this.addDialog(a,JSV.common.Annotation.AType.Integration,new JSV.common.IntegralData(this.getSpectrum(),b))}return c.getData()},"~N,JSV.common.Parameters,~B");c(c$,"getMeasurementInfo",function(a,b){var c;switch(a){case JSV.common.Annotation.AType.PeakList:c=this.getPeakListing(b,null,!1);break;case JSV.common.Annotation.AType.Integration:c=this.getIntegration(b,null,!1);break;default:return null}if(null==
c)return null;var f=new java.util.Hashtable;c.getInfo(f);return f},"JSV.common.Annotation.AType,~N");c(c$,"getInfo",function(a,b){var c=new java.util.Hashtable;if("viewInfo".equalsIgnoreCase(a))return this.getScale().getInfo(c);var f=new JU.Lst;c.put("spectra",f);for(var g=0;g<this.nSpectra;g++)if(!(0<=b&&g!=b)){var e=this.spectra.get(g),l=e.getInfo(a);if(0<=b&&null!=a&&(2==l.size()||a.equalsIgnoreCase("id")))return 2==l.size()&&l.remove("id"),l;JSV.common.Parameters.putInfo(a,l,"type",e.getDataType());
JSV.common.Parameters.putInfo(a,l,"titleLabel",e.getTitleLabel());JSV.common.Parameters.putInfo(a,l,"filePath",e.getFilePath().$replace("\\","/"));JSV.common.Parameters.putInfo(a,l,"PeakList",JSV.common.Parameters.isMatch(a,"PeakList")?this.getMeasurementInfo(JSV.common.Annotation.AType.PeakList,g):null);JSV.common.Parameters.putInfo(a,l,"Integration",JSV.common.Parameters.isMatch(a,"Integration")?this.getMeasurementInfo(JSV.common.Annotation.AType.Integration,g):null);if(0<=b)return l;f.addLast(l)}return c},
"~S,~N");c(c$,"getTitle",function(a){return 1==this.nSpectra||0<=this.iSpectrumSelected&&(!a||1==this.nSplit)?this.getSpectrum().getTitle():null},"~B");c(c$,"getCurrentView",function(){this.setScale(this.getFixedSelectedSpectrumIndex());return this.viewData.getScale()});c(c$,"set2DXY",function(a,b,c){var f;null!=this.gs2dLinkedX&&(f=this.toPixelX(a),f!=this.fixX(f)&&(f=-2147483648,a=1.7976931348623157E308),this.cur1D2x1.setX(a,f));null!=this.gs2dLinkedY&&(f=this.toPixelX(b),f!=this.fixX(f)&&(f=-2147483648,
b=1.7976931348623157E308),this.cur1D2x2.setX(b,f));this.cur1D2Locked=c},"~N,~N,~B");c(c$,"dialogsToFront",function(a){if(null!=this.dialogs){null==a&&(a=this.getSpectrum());for(var b,c=this.dialogs.entrySet().iterator();c.hasNext()&&((b=c.next())||1);){var f=b.getValue();this.isVisible(f)&&(null==a?f.setVisible(!0):f.setFocus(f.getSpectrum()===a))}}},"JSV.common.Spectrum");c(c$,"setPlotColors",function(a){var b=a;if(b.length>this.nSpectra)a=Array(this.nSpectra),System.arraycopy(b,0,a,0,this.nSpectra),
b=a;else if(this.nSpectra>b.length){a=Array(this.nSpectra);var c=this.nSpectra-b.length;System.arraycopy(b,0,a,0,b.length);for(var f=0,b=b.length;f<c;f++,b++)a[b]=this.generateRandomColor();b=a}this.plotColors=b},"~O");c(c$,"disposeImage",function(){null!=this.image2D&&this.image2D.parentNode.removeChild(this.image2D);this.plotColors=this.highlights=this.pd=this.jsvp=this.image2D=null});c(c$,"generateRandomColor",function(){for(;;){var a=w(255*Math.random()),b=w(255*Math.random()),c=w(255*Math.random()),
a=this.g2d.getColor3(a,b,c);if(0!=a.getRGB())return a}});c(c$,"setPlotColor0",function(a){this.plotColors[0]=a},"~O");c(c$,"getPlotColor",function(a){return a>=this.plotColors.length?null:this.plotColors[a]},"~N");c(c$,"setColorFromToken",function(a,b){null!=b&&this.g2d.setGraphicsColor(a,b===JSV.common.ScriptToken.PLOTCOLOR?this.plotColors[0]:this.pd.getColor(b))},"~O,JSV.common.ScriptToken");c(c$,"setPlotColor",function(a,b){var c;switch(b){case -3:c=JSV.common.GraphSet.veryLightGrey;break;case -2:c=
this.pd.BLACK;break;case -1:c=this.pd.getColor(JSV.common.ScriptToken.INTEGRALPLOTCOLOR);break;default:c=this.plotColors[b]}this.g2d.setGraphicsColor(a,c)},"~O,~N");c(c$,"draw2DImage",function(){null!=this.imageView&&this.g2d.drawGrayScaleImage(this.gMain,this.image2D,this.imageView.xPixel0,this.imageView.yPixel0,this.imageView.xPixel0+this.imageView.xPixels-1,this.imageView.yPixel0+this.imageView.yPixels-1,this.imageView.xView1,this.imageView.yView1,this.imageView.xView2,this.imageView.yView2)});
c(c$,"get2DImage",function(){this.imageView=new JSV.common.ImageView;this.imageView.set(this.viewList.get(0).getScale());if(!this.update2dImage(!0))return!1;this.imageView.resetZoom();return this.sticky2Dcursor=!0});c(c$,"update2dImage",function(a){this.imageView.set(this.viewData.getScale());var b=this.getSpectrumAt(0),c=this.imageView.get2dBuffer(b,!a);if(null==c)return this.imageView=this.image2D=null,!1;a&&(c=this.imageView.adjustView(b,this.viewData),this.imageView.resetView());this.image2D=
this.g2d.newGrayScaleImage(this.gMain,this.image2D,this.imageView.imageWidth,this.imageView.imageHeight,c);this.setImageWindow();return!0},"~B");c(c$,"getAnnotation",function(a,b,c,f,g,e,l){return(new JSV.common.ColoredAnnotation).setCA(a,b,this.getSpectrum(),c,this.pd.BLACK,f,g,e,l)},"~N,~N,~S,~B,~B,~N,~N");c(c$,"getAnnotation",function(a,b){return JSV.common.Annotation.getColoredAnnotation(this.g2d,this.getSpectrum(),a,b)},"JU.Lst,JSV.common.Annotation");c(c$,"fillBox",function(a,b,c,f,g,e){this.setColorFromToken(a,
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k("JSV.common"),t(["java.lang.Enum","JSV.source.JDXDataObject","JU.Lst"],"JSV.common.Spectrum","java.lang.Boolean $.Double java.util.Hashtable JU.PT JSV.common.Coordinate $.Parameters $.PeakInfo JSV.source.JDXSourceStreamTokenizer JU.Logger".split(" "),function(){c$=q(function(){this.highlightedPeak=this.selectedPeak=this.piUnitsY=this.piUnitsX=this.peakList=this.subSpectra=null;this.currentSubSpectrumIndex=this.specShift=0;this.$isForcedSubset=!1;this.id="";this.convertedSpectrum=null;this.userYFactor=
1;this.exportXAxisLeftToRight=!1;this.fillColor=null;n(this,arguments)},JSV.common,"Spectrum",JSV.source.JDXDataObject);H(c$,function(){this.peakList=new JU.Lst});e(c$,"finalize",function(){System.out.println("JDXSpectrum "+this+" finalized "+this.title)});c(c$,"dispose",function(){});c(c$,"isForcedSubset",function(){return this.$isForcedSubset});c(c$,"setId",function(a){this.id=a},"~S");p(c$,function(){x(this,JSV.common.Spectrum,[]);this.headerTable=new JU.Lst;this.xyCoords=[];this.parent=this});
c(c$,"copy",function(){var a=new JSV.common.Spectrum;this.copyTo(a);a.setPeakList(this.peakList,this.piUnitsX,null);a.fillColor=this.fillColor;return a});c(c$,"getXYCoords",function(){return this.getCurrentSubSpectrum().xyCoords});c(c$,"getPeakList",function(){return this.peakList});c(c$,"setPeakList",function(a,b,c){this.peakList=a;this.piUnitsX=b;this.piUnitsY=c;for(b=a.size();0<=--b;)this.peakList.get(b).spectrum=this;JU.Logger.debugging&&JU.Logger.info("Spectrum "+this.getTitle()+" peaks: "+a.size());
return a.size()},"JU.Lst,~S,~S");c(c$,"selectPeakByFileIndex",function(a,b,c){if(null!=this.peakList&&0<this.peakList.size()&&(null==c||this.sourceID.equals(b)))for(var f=0;f<this.peakList.size();f++)if(this.peakList.get(f).checkFileIndex(a,b,c))return System.out.println("selecting peak by FileIndex "+this+" "+this.peakList.get(f)),this.selectedPeak=this.peakList.get(f);return null},"~S,~S,~S");c(c$,"selectPeakByFilePathTypeModel",function(a,b,c){if(null!=this.peakList&&0<this.peakList.size())for(var f=
0;f<this.peakList.size();f++)if(this.peakList.get(f).checkFileTypeModel(a,b,c))return System.out.println("selecting peak byFilePathTypeModel "+this+" "+this.peakList.get(f)),this.selectedPeak=this.peakList.get(f);return null},"~S,~S,~S");c(c$,"matchesPeakTypeModel",function(a,b){if(a.equals("ID"))return this.sourceID.equalsIgnoreCase(b);if(null!=this.peakList&&0<this.peakList.size())for(var c=0;c<this.peakList.size();c++)if(this.peakList.get(c).checkTypeModel(a,b))return!0;return!1},"~S,~S");c(c$,
"setSelectedPeak",function(a){this.selectedPeak=a},"JSV.common.PeakInfo");c(c$,"setHighlightedPeak",function(a){this.highlightedPeak=a},"JSV.common.PeakInfo");c(c$,"getSelectedPeak",function(){return this.selectedPeak});c(c$,"getModelPeakInfoForAutoSelectOnLoad",function(){if(null!=this.peakList)for(var a=0;a<this.peakList.size();a++)if(this.peakList.get(a).autoSelectOnLoad())return this.peakList.get(a);return null});c(c$,"getAssociatedPeakInfo",function(a,b){this.selectedPeak=this.findPeakByCoord(a,
b);return null==this.selectedPeak?this.getBasePeakInfo():this.selectedPeak},"~N,JSV.common.Coordinate");c(c$,"findPeakByCoord",function(a,b){if(null!=b&&null!=this.peakList&&0<this.peakList.size()){for(var c=b.getXVal(),f=-1,g=1E100,e=0;e<this.peakList.size();e++){var l=this.peakList.get(e).checkRange(a,c);l<g&&(g=l,f=e)}if(0<=f)return this.peakList.get(f)}return null},"~N,JSV.common.Coordinate");c(c$,"getPeakTitle",function(){return null!=this.selectedPeak?this.selectedPeak.getTitle():null!=this.highlightedPeak?
this.highlightedPeak.getTitle():this.getTitleLabel()});c(c$,"getTitleLabel",function(){var a=null==this.peakList||0==this.peakList.size()?this.getQualifiedDataType():this.peakList.get(0).getType();return(null!=a&&0<a.length?a+" ":"")+this.getTitle()});c(c$,"setNextPeak",function(a,b){if(null==this.peakList||0==this.peakList.size())return-1;for(var c=a.getXVal()+1E-6*b,f=-1,g=-1,e=1.7976931348623157E308*b,l=0,j=this.peakList.size();0<=--j;){var m=this.peakList.get(j).getX();0<b?m>c&&m<e?(f=j,e=m):
m<c&&m-c<l&&(g=j,l=m-c):m<c&&m>e?(f=j,e=m):m>c&&m-c>l&&(g=j,l=m-c)}if(0>f){if(0>g)return-1;f=g}return f},"JSV.common.Coordinate,~N");c(c$,"getPercentYValueAt",function(a){return!this.isContinuous()?NaN:this.getYValueAt(a)},"~N");c(c$,"getYValueAt",function(a){return JSV.common.Coordinate.getYValueAt(this.xyCoords,a)},"~N");c(c$,"setUserYFactor",function(a){this.userYFactor=a},"~N");c(c$,"getUserYFactor",function(){return this.userYFactor});c(c$,"getConvertedSpectrum",function(){return this.convertedSpectrum});
c(c$,"setConvertedSpectrum",function(a){this.convertedSpectrum=a},"JSV.common.Spectrum");c$.taConvert=c(c$,"taConvert",function(a,b){if(!a.isContinuous())return a;switch(b){case JSV.common.Spectrum.IRMode.NO_CONVERT:return a;case JSV.common.Spectrum.IRMode.TO_ABS:if(!a.isTransmittance())return a;break;case JSV.common.Spectrum.IRMode.TO_TRANS:if(!a.isAbsorbance())return a}var c=a.getConvertedSpectrum();return null!=c?c:a.isAbsorbance()?JSV.common.Spectrum.toT(a):JSV.common.Spectrum.toA(a)},"JSV.common.Spectrum,JSV.common.Spectrum.IRMode");
c$.toT=c(c$,"toT",function(a){if(!a.isAbsorbance())return null;var b=a.getXYCoords(),c=Array(b.length);JSV.common.Coordinate.isYInRange(b,0,4)||(b=JSV.common.Coordinate.normalise(b,0,4));for(var f=0;f<b.length;f++)c[f]=(new JSV.common.Coordinate).set(b[f].getXVal(),JSV.common.Spectrum.toTransmittance(b[f].getYVal()));return JSV.common.Spectrum.newSpectrum(a,c,"TRANSMITTANCE")},"JSV.common.Spectrum");c$.toA=c(c$,"toA",function(a){if(!a.isTransmittance())return null;for(var b=a.getXYCoords(),c=Array(b.length),
f=JSV.common.Coordinate.isYInRange(b,-2,2),g=0;g<b.length;g++)c[g]=(new JSV.common.Coordinate).set(b[g].getXVal(),JSV.common.Spectrum.toAbsorbance(b[g].getYVal(),f));return JSV.common.Spectrum.newSpectrum(a,c,"ABSORBANCE")},"JSV.common.Spectrum");c$.newSpectrum=c(c$,"newSpectrum",function(a,b,c){var f=a.copy();f.setOrigin("JSpecView Converted");f.setOwner("JSpecView Generated");f.setXYCoords(b);f.setYUnits(c);a.setConvertedSpectrum(f);f.setConvertedSpectrum(a);return f},"JSV.common.Spectrum,~A,~S");
c$.toAbsorbance=c(c$,"toAbsorbance",function(a,b){return Math.min(4,b?2-JSV.common.Spectrum.log10(a):-JSV.common.Spectrum.log10(a))},"~N,~B");c$.toTransmittance=c(c$,"toTransmittance",function(a){return 0>=a?1:Math.pow(10,-a)},"~N");c$.log10=c(c$,"log10",function(a){return Math.log(a)/Math.log(10)},"~N");c$.process=c(c$,"process",function(a,b){if(b===JSV.common.Spectrum.IRMode.TO_ABS||b===JSV.common.Spectrum.IRMode.TO_TRANS)for(var c=0;c<a.size();c++)a.set(c,JSV.common.Spectrum.taConvert(a.get(c),
b));return!0},"JU.Lst,JSV.common.Spectrum.IRMode");c(c$,"getSubSpectra",function(){return this.subSpectra});c(c$,"getCurrentSubSpectrum",function(){return null==this.subSpectra?this:this.subSpectra.get(this.currentSubSpectrumIndex)});c(c$,"advanceSubSpectrum",function(a){return this.setCurrentSubSpectrum(this.currentSubSpectrumIndex+a)},"~N");c(c$,"setCurrentSubSpectrum",function(a){return this.currentSubSpectrumIndex=JSV.common.Coordinate.intoRange(a,0,this.subSpectra.size()-1)},"~N");c(c$,"addSubSpectrum",
function(a,b){if(!b&&(2>this.numDim||this.blockID!=a.blockID)||!JSV.common.Spectrum.allowSubSpec(this,a))return!1;this.$isForcedSubset=b;null==this.subSpectra&&(this.subSpectra=new JU.Lst,this.addSubSpectrum(this,!0));this.subSpectra.addLast(a);a.parent=this;return!0},"JSV.common.Spectrum,~B");c(c$,"getSubIndex",function(){return null==this.subSpectra?-1:this.currentSubSpectrumIndex});c(c$,"setExportXAxisDirection",function(a){this.exportXAxisLeftToRight=a},"~B");c(c$,"isExportXAxisLeftToRight",function(){return this.exportXAxisLeftToRight});
c(c$,"getInfo",function(a){var b=new java.util.Hashtable;if("id".equalsIgnoreCase(a))return b.put(a,this.id),b;b.put("id",this.id);JSV.common.Parameters.putInfo(a,b,"specShift",Double.$valueOf(this.specShift));var c="header".equals(a);if(!c&&null!=a)for(var f=this.headerTable.size();0<=--f;){var g=this.headerTable.get(f);if(g[0].equalsIgnoreCase(a)||g[2].equalsIgnoreCase(a))return b.put(a,g[1]),b}for(var g=new java.util.Hashtable,e=this.getHeaderRowDataAsArray(),f=0;f<e.length;f++){var l=JSV.source.JDXSourceStreamTokenizer.cleanLabel(e[f][0]);
if(!(null!=a&&!c&&!l.equals(a))){var j=JSV.common.Spectrum.fixInfoValue(e[f][1]);if(null==a){var m=new java.util.Hashtable;m.put("value",j);m.put("index",Integer.$valueOf(f+1));b.put(l,m)}else b.put(l,j)}}0<g.size()&&b.put("header",g);c||(JSV.common.Parameters.putInfo(a,b,"titleLabel",this.getTitleLabel()),JSV.common.Parameters.putInfo(a,b,"type",this.getDataType()),JSV.common.Parameters.putInfo(a,b,"isHZToPPM",Boolean.$valueOf(this.$isHZtoPPM)),JSV.common.Parameters.putInfo(a,b,"subSpectrumCount",
Integer.$valueOf(null==this.subSpectra?0:this.subSpectra.size())));return b},"~S");c$.fixInfoValue=c(c$,"fixInfoValue",function(a){try{return Integer.$valueOf(a)}catch(b){if(!A(b,Exception))throw b;}try{return Double.$valueOf(a)}catch(c){if(!A(c,Exception))throw c;}return a},"~S");e(c$,"toString",function(){return this.getTitleLabel()});c(c$,"findMatchingPeakInfo",function(a){for(var b=0;b<this.peakList.size();b++)if(this.peakList.get(b).checkTypeMatch(a))return this.peakList.get(b);return null},
"JSV.common.PeakInfo");c(c$,"getBasePeakInfo",function(){return 0==this.peakList.size()?new JSV.common.PeakInfo:new JSV.common.PeakInfo(' baseModel="" '+this.peakList.get(0))});c(c$,"getAxisLabel",function(a){var b=a?this.piUnitsX:this.piUnitsY;null==b&&(b=a?this.xLabel:this.yLabel);null==b&&(b=a?this.xUnits:this.yUnits);return null==b?"":b.equalsIgnoreCase("WAVENUMBERS")?"1/cm":b.equalsIgnoreCase("nanometers")?"nm":b},"~B");c(c$,"findXForPeakNearest",function(a){return JSV.common.Coordinate.findXForPeakNearest(this.xyCoords,
a,this.isInverted())},"~N");c(c$,"addSpecShift",function(a){if(0!=a&&(this.specShift+=a,JSV.common.Coordinate.shiftX(this.xyCoords,a),null!=this.subSpectra))for(var b=this.subSpectra.size();0<=--b;){var c=this.subSpectra.get(b);c!==this&&c!==this.parent&&c.addSpecShift(a)}return this.specShift},"~N");c$.allowSubSpec=c(c$,"allowSubSpec",function(a,b){return a.is1D()==b.is1D()&&a.xUnits.equalsIgnoreCase(b.xUnits)&&a.isHNMR()==b.isHNMR()},"JSV.common.Spectrum,JSV.common.Spectrum");c$.areXScalesCompatible=
c(c$,"areXScalesCompatible",function(a,b,c,f){var g=a.isNMR();if(g!=b.isNMR()||a.isContinuous()!=b.isContinuous()||!f&&!JSV.common.Spectrum.areUnitsCompatible(a.xUnits,b.xUnits))return!1;if(c){if(a.is1D()!=b.is1D())return!1}else if(f){if(!g)return!0}else if(!a.is1D()||!b.is1D())return!1;return!g||b.is1D()&&a.parent.nucleusX.equals(b.parent.nucleusX)},"JSV.common.Spectrum,JSV.common.Spectrum,~B,~B");c$.areUnitsCompatible=c(c$,"areUnitsCompatible",function(a,b){if(a.equalsIgnoreCase(b))return!0;a=a.toUpperCase();
b=b.toUpperCase();return a.equals("HZ")&&b.equals("PPM")||a.equals("PPM")&&b.equals("HZ")},"~S,~S");c$.areLinkableX=c(c$,"areLinkableX",function(a,b){return a.isNMR()&&b.isNMR()&&a.nucleusX.equals(b.nucleusX)},"JSV.common.Spectrum,JSV.common.Spectrum");c$.areLinkableY=c(c$,"areLinkableY",function(a,b){return a.isNMR()&&b.isNMR()&&a.nucleusX.equals(b.nucleusY)},"JSV.common.Spectrum,JSV.common.Spectrum");c(c$,"setNHydrogens",function(a){this.nH=a},"~N");c(c$,"getPeakWidth",function(){return(this.getLastX()-
this.getFirstX())/100});c(c$,"setSimulated",function(a){this.isSimulation=!0;var b=this.sourceID;0==b.length&&(b=JU.PT.rep(a,"http://SIMULATION/",""));0<=b.indexOf("MOL=")&&(b="");this.title="SIMULATED "+JU.PT.rep(b,"$","")},"~S");c(c$,"setFillColor",function(a){this.fillColor=a;null!=this.convertedSpectrum&&(this.convertedSpectrum.fillColor=a)},"javajs.api.GenericColor");z(self.c$);c$=s(JSV.common.Spectrum,"IRMode",Enum);c$.getMode=c(c$,"getMode",function(a){switch(null==a?"I":a.toUpperCase().charAt(0)){case "A":return JSV.common.Spectrum.IRMode.TO_ABS;
case "T":return a.equalsIgnoreCase("TOGGLE")?JSV.common.Spectrum.IRMode.TOGGLE:JSV.common.Spectrum.IRMode.TO_TRANS;case "N":return JSV.common.Spectrum.IRMode.NO_CONVERT;default:return JSV.common.Spectrum.IRMode.TOGGLE}},"~S");r(c$,"NO_CONVERT",0,[]);r(c$,"TO_TRANS",1,[]);r(c$,"TO_ABS",2,[]);r(c$,"TOGGLE",3,[]);c$=y();C(c$,"MAXABS",4)}),___date="$Date: 2014-06-28 02:24:08 -0500 (Sat, 28 Jun 2014) $",___svnRev="$LastChangedRevision: 1655 $",___version="14.2.1",k("JSV.common"),c$=s(JSV.common,"JSVersion"),
C(c$,"VERSION",null,"VERSION_SHORT",null),Q=P=V=null,V=self.___version,P=self.___date,Q=self.___svnRev,null!=P&&(P=P.substring(7,23)),null!=Q&&(Q=Q.substring(22,27)),JSV.common.JSVersion.VERSION_SHORT=null!=V?V:"(Unknown version)",JSV.common.JSVersion.VERSION=JSV.common.JSVersion.VERSION_SHORT+"/SVN"+Q+"/"+(null!=P?P:"(Unknown date)"),k("JSV.common"),t(["java.util.Hashtable"],"JSV.common.JSVFileManager","java.io.BufferedInputStream $.BufferedReader $.InputStreamReader $.StringReader java.net.URL JU.AU $.Encoding $.PT $.SB JSV.common.JSVersion $.JSViewer JSV.exception.JSVException JU.Logger".split(" "),
function(){c$=s(JSV.common,"JSVFileManager");c(c$,"isApplet",function(){return null!=JSV.common.JSVFileManager.appletDocumentBase});c$.getFileAsString=c(c$,"getFileAsString",function(a){if(null==a)return null;var b,c=new JU.SB;try{b=JSV.common.JSVFileManager.getBufferedReaderFromName(a,null);for(var f;null!=(f=b.readLine());)c.append(f),c.appendC("\n");b.close()}catch(g){if(A(g,Exception))return null;throw g;}return c.toString()},"~S");c$.getBufferedReaderForInputStream=c(c$,"getBufferedReaderForInputStream",
function(a){try{return new java.io.BufferedReader(new java.io.InputStreamReader(a,"UTF-8"))}catch(b){if(A(b,Exception))return null;throw b;}},"java.io.InputStream");c$.getBufferedReaderForData=c(c$,"getBufferedReaderForData",function(a){return null==a?null:new java.io.BufferedReader(new java.io.StringReader(u(a,String)?a:String.instantialize(a)))},"~O");c$.getBufferedReaderFromName=c(c$,"getBufferedReaderFromName",function(a,b){if(null==a)throw new JSV.exception.JSVException("Cannot find "+a);JU.Logger.info("JSVFileManager getBufferedReaderFromName "+
a);var c=JSV.common.JSVFileManager.getFullPathName(a);c.equals(a)||JU.Logger.info("JSVFileManager getBufferedReaderFromName "+c);return JSV.common.JSVFileManager.getUnzippedBufferedReaderFromName(c,b)},"~S,~S");c$.getFullPathName=c(c$,"getFullPathName",function(a){try{if(null==JSV.common.JSVFileManager.appletDocumentBase){if(JSV.common.JSVFileManager.isURL(a)){var b=new java.net.URL(R("java.net.URL"),a,null);return b.toString()}return JSV.common.JSVFileManager.viewer.apiPlatform.newFile(a).getFullPath()}if(1==
a.indexOf(":\\")||1==a.indexOf(":/"))a="file:///"+a;else if(a.startsWith("cache://"))return a;b=new java.net.URL(JSV.common.JSVFileManager.appletDocumentBase,a,null);return b.toString()}catch(c){if(A(c,Exception))throw new JSV.exception.JSVException("Cannot create path for "+a);throw c;}},"~S");c$.isURL=c(c$,"isURL",function(a){for(var b=JSV.common.JSVFileManager.urlPrefixes.length;0<=--b;)if(a.startsWith(JSV.common.JSVFileManager.urlPrefixes[b]))return!0;return!1},"~S");c$.urlTypeIndex=c(c$,"urlTypeIndex",
function(a){for(var b=0;b<JSV.common.JSVFileManager.urlPrefixes.length;++b)if(a.startsWith(JSV.common.JSVFileManager.urlPrefixes[b]))return b;return-1},"~S");c$.isLocal=c(c$,"isLocal",function(a){if(null==a)return!1;a=JSV.common.JSVFileManager.urlTypeIndex(a);return 0>a||4==a},"~S");c$.getUnzippedBufferedReaderFromName=c(c$,"getUnzippedBufferedReaderFromName",function(a,b){var c=null;0<=a.indexOf("|")&&(c=JU.PT.split(a,"|"),null!=c&&0<c.length&&(a=c[0]));if(a.startsWith("http://SIMULATION/"))return JSV.common.JSVFileManager.getSimulationReader(a);
try{var f=JSV.common.JSVFileManager.getInputStream(a,!0,null);if(u(f,JU.SB)||u(f,String))return new java.io.BufferedReader(new java.io.StringReader(f.toString()));if(JSV.common.JSVFileManager.isAB(f))return new java.io.BufferedReader(new java.io.StringReader(String.instantialize(f)));var g=new java.io.BufferedInputStream(f),f=g;if(JSV.common.JSVFileManager.isZipFile(g))return JSV.common.JSViewer.getInterface("JSV.common.JSVZipUtil").newJSVZipFileSequentialReader(f,c,b);JSV.common.JSVFileManager.isGzip(g)&&
(f=JSV.common.JSViewer.getInterface("JSV.common.JSVZipUtil").newGZIPInputStream(f));return new java.io.BufferedReader(new java.io.InputStreamReader(f,"UTF-8"))}catch(e){if(A(e,Exception))throw new JSV.exception.JSVException("Cannot read file "+a+" "+e);throw e;}},"~S,~S");c$.getAbbrSimulationFileName=c(c$,"getAbbrSimulationFileName",function(a){var b=JSV.common.JSVFileManager.getAbbreviatedSimulationName(a,!0);0<=a.indexOf("MOL=")&&(a=JSV.common.JSVFileManager.htCorrelationCache.get(a),null!=a&&JSV.common.JSVFileManager.htCorrelationCache.put(b,
a));return b},"~S");c$.getAbbreviatedSimulationName=c(c$,"getAbbreviatedSimulationName",function(a,b){return 0<=a.indexOf("MOL=")?(b?"http://SIMULATION/":"")+"MOL="+JSV.common.JSVFileManager.getSimulationHash(a):a},"~S,~B");c$.getSimulationHash=c(c$,"getSimulationHash",function(a){return""+Math.abs(a.substring(a.indexOf("V2000")+1).hashCode())},"~S");c$.getSimulationFileData=c(c$,"getSimulationFileData",function(a){return JSV.common.JSVFileManager.htCorrelationCache.get(a.startsWith("MOL=")?a.substring(4):
JSV.common.JSVFileManager.getAbbreviatedSimulationName(a,!1))},"~S");c$.getSimulationReader=c(c$,"getSimulationReader",function(a){var b=JSV.common.JSVFileManager.htCorrelationCache.get(a);null==b&&(b=JSV.common.JSVFileManager.getNMRSimulationJCampDX(a.substring(18)),null!=b&&JSV.common.JSVFileManager.htCorrelationCache.put(a,b));return JSV.common.JSVFileManager.getBufferedReaderForData(b)},"~S");c$.isAB=c(c$,"isAB",function(a){return Z(a)},"~O");c$.isZipFile=c(c$,"isZipFile",function(a){try{var b=
K(4,0);a.mark(5);var c=a.read(b,0,4);a.reset();return 4==c&&80==b[0]&&75==b[1]&&3==b[2]&&4==b[3]}catch(f){if(A(f,Exception))throw new JSV.exception.JSVException(f.toString());throw f;}},"java.io.InputStream");c$.isGzip=c(c$,"isGzip",function(a){try{var b=K(4,0);a.mark(5);var c=a.read(b,0,4);a.reset();return 4==c&&31==b[0]&&139==b[1]}catch(f){if(A(f,Exception))throw new JSV.exception.JSVException(f.toString());throw f;}},"java.io.InputStream");c$.getStreamAsBytes=c(c$,"getStreamAsBytes",function(a,
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function(){c$=q(function(){this.irMode=this.overlayLegendDialog=this.viewDialog=this.dialogManager=this.jsvpPopupMenu=this.fileHelper=this.scriptQueue=this.properties=this.mainPanel=this.selectedPanel=this.repaintManager=this.parameters=this.panelNodes=this.currentSource=this.spectraTree=this.g2d=this.si=null;this.autoShowLegend=this.autoIntegrate=this.interfaceOverlaid=this.loadImaginary=!1;this.obscureTitleFromUser=null;this.allowMenu=this.allowCompoundMenu=!0;this.initialEndIndex=this.initialStartIndex=
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break;case JSV.common.ScriptToken.SHOWMENU:this.showMenu(-2147483648,0);break;case JSV.common.ScriptToken.SHOWPEAKLIST:this.pd().showAnnotation(JSV.common.Annotation.AType.PeakList,JSV.common.Parameters.getTFToggle(h));break;case JSV.common.ScriptToken.SHOWPROPERTIES:this.show("properties");break;case JSV.common.ScriptToken.SHOWSOURCE:this.show("source");break;case JSV.common.ScriptToken.YSCALE:this.setYScale(h);break;case JSV.common.ScriptToken.WINDOW:this.si.siNewWindow(JSV.common.Parameters.isTrue(h),
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c(c$,"highlight",function(a){var b=JSV.common.ScriptToken.getTokens(a),c=b.size();switch(c){case 3:case 5:case 6:case 7:break;case 2:case 4:if(b.get(c-1).equalsIgnoreCase("OFF"))break;default:return!1}if(!this.isClosed()){a=JU.PT.parseFloat(1<c?b.get(1):"");var f=JU.PT.parseFloat(2<c?b.get(2):""),e=this.getRGB(3<c?b.get(3):"100"),h=this.getRGB(4<c?b.get(4):"100"),l=this.getRGB(5<c?b.get(5):"100"),b=this.getRGB(6<c?b.get(6):"100");Float.isNaN(a)||Float.isNaN(f)?this.pd().removeAllHighlights():(this.pd().removeHighlight(a,
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100,a=this.selectedPanel.getInput("Enter zoom range x1 x2","Zoom",a),null==a||this.execZoom(a);case 1:return a=a.get(0),a.equalsIgnoreCase("next")?this.pd().nextView():a.toLowerCase().startsWith("prev")?this.pd().previousView():a.equalsIgnoreCase("out")?this.pd().resetView():a.equalsIgnoreCase("clear")&&this.pd().clearAllView(),!0;case 2:b=Double.parseDouble(a.get(0));c=Double.parseDouble(a.get(1));break;case 4:b=Double.parseDouble(a.get(0)),f=Double.parseDouble(a.get(1)),c=Double.parseDouble(a.get(2)),
e=Double.parseDouble(a.get(3))}this.pd().setZoom(b,f,c,e);return!0},"~S");c(c$,"scaleSelectedBy",function(a,b){try{for(var c=Double.parseDouble(b),f=a.size();0<=--f;)a.get(f).pd().scaleSelectedBy(c)}catch(e){if(!A(e,Exception))throw e;}},"JU.Lst,~S");c(c$,"pd",function(){return null==this.selectedPanel?null:this.selectedPanel.getPanelData()});c(c$,"isClosed",function(){return null==this.pd()});c(c$,"execSelect",function(a){if(a.startsWith("ID ")){if(!this.isClosed())try{this.pd().selectSpectrum(null,
"ID",JU.PT.trimQuotes(a.substring(3)),!0)}catch(b){if(!A(b,Exception))throw b;}}else{for(var c=this.panelNodes,f=c.size();0<=--f;)c.get(f).pd().selectFromEntireSet(-2147483648);c=new JU.Lst;this.fillSpecList(a,c,!1)}},"~S");c(c$,"execView",function(a,b){if(a.equals(""))this.checkOverlay();else{var c=new JU.Lst,f=this.fillSpecList(a,c,!0);0<c.size()&&this.si.siOpenDataOrFile(null,f,c,f,-1,-1,!1,null,null);b||this.si.siValidateAndRepaint(!1)}},"~S,~B");c(c$,"execIRMode",function(a){for(var b=JSV.common.Spectrum.IRMode.getMode(a),
c=this.pd().getSpectrum().dataType,f=this.panelNodes.size();0<=--f;)this.panelNodes.get(f).pd().setIRMode(b,c);this.setIRmode(a)},"~S");c(c$,"execIntegrate",function(a){this.isClosed()||(this.pd().checkIntegral(this.parameters,a),null!=this.integrationRatios&&this.pd().setIntegrationRatios(this.integrationRatios),this.integrationRatios=null,this.repaint(!0))},"~S");c(c$,"repaint",function(a){this.selectedPanel.doRepaint(a)},"~B");c(c$,"execSetIntegralParameter",function(a,b){var c=this.parameters;
switch(a){case JSV.common.ScriptToken.INTEGRALRANGE:c.integralRange=b;break;case JSV.common.ScriptToken.INTEGRALOFFSET:c.integralOffset=b}this.isClosed()||this.pd().checkIntegral(this.parameters,"update")},"JSV.common.ScriptToken,~N");c(c$,"setYScale",function(a){var b=JSV.common.ScriptToken.getTokens(a),c=0,f=!1;1<b.size()&&b.get(0).equalsIgnoreCase("ALL")&&(f=!0,c++);a=Double.parseDouble(b.get(c++));b=Double.parseDouble(b.get(c));if(f){f=this.pd().getSpectrum();for(c=this.panelNodes.size();0<=--c;){var e=
this.panelNodes.get(c);e.source===this.currentSource&&JSV.common.Spectrum.areXScalesCompatible(f,e.getSpectrum(),!1,!1)&&e.pd().setZoom(0,a,0,b)}}else this.pd().setZoom(0,a,0,b)},"~S");c(c$,"setOverlayLegendVisibility",function(a,b){b&&(this.overlayLegendVisible=null==a?!this.overlayLegendVisible:a===Boolean.TRUE);for(var c=JSV.common.PanelNode.findNode(this.selectedPanel,this.panelNodes),f=this.panelNodes.size();0<=--f;)this.showOverlayLegend(this.panelNodes.get(f),this.panelNodes.get(f)===c&&this.overlayLegendVisible)},
"Boolean,~B");c(c$,"showOverlayLegend",function(a,b){var c=a.legend;null==c&&b&&(c=a.setLegend(1<a.pd().getNumberOfSpectraInCurrentSet()&&1==a.pd().getNumberOfGraphSets()?this.getDialog(JSV.common.Annotation.AType.OverlayLegend,null):null));null!=c&&c.setVisible(b)},"JSV.common.PanelNode,~B");c(c$,"syncScript",function(a){a.equals("TEST")&&(a=JSV.common.JSViewer.testScript);JU.Logger.info("JSViewer.syncScript Jmol>JSV "+a);if(0>a.indexOf("<PeakData"))a.startsWith("JSVSTR:")?this.si.syncToJmol(a):
(this.runScriptNow(a),0<=a.indexOf("#SYNC_PEAKS")&&this.syncPeaksAfterSyncScript());else{JU.Logger.info(">>toJSV>> "+a);var b=JU.PT.getQuotedAttribute(a,"sourceID"),c,f,e,h;if(null==b){f=JU.PT.getQuotedAttribute(a,"file");e=JU.PT.getQuotedAttribute(a,"index");if(null==f||null==e)return;f=JU.PT.rep(f,"#molfile","");c=JU.PT.getQuotedAttribute(a,"model");b=JU.PT.getQuotedAttribute(a,"src");h=null!=b&&b.startsWith("Jmol")?null:this.returnFromJmolModel;if(null!=c&&null!=h&&!c.equals(h)){JU.Logger.info("JSV ignoring model "+
c+"; should be "+h);return}this.returnFromJmolModel=null;if(0==this.panelNodes.size()||!this.checkFileAlreadyLoaded(f))JU.Logger.info("file "+f+" not found -- JSViewer closing all and reopening"),this.si.siSyncLoad(f);a=JU.PT.getQuotedAttribute(a,"type");h=null}else f=null,e=c=b,h=","+JU.PT.getQuotedAttribute(a,"atom")+",",a="ID";e=this.selectPanelByPeak(f,e,h);h=this.pd();h.selectSpectrum(f,a,c,!0);this.si.siSendPanelChange();h.addPeakHighlight(e);this.repaint(!0);(null==b||null!=e&&null!=e.getAtoms())&&
this.si.syncToJmol(this.jmolSelect(e))}},"~S");c(c$,"syncPeaksAfterSyncScript",function(){var a=this.currentSource;if(null!=a)try{var b="file="+JU.PT.esc(a.getFilePath()),c=a.getSpectra().get(0).getPeakList(),f=new JU.SB;f.append("[");for(var e=c.size(),a=0;a<e;a++){var h=c.get(a).toString(),h=h+" "+b;f.append(JU.PT.esc(h));0<a&&f.append(",")}f.append("]");this.si.syncToJmol("Peaks: "+f)}catch(l){if(!A(l,Exception))throw l;}});c(c$,"checkFileAlreadyLoaded",function(a){if(this.isClosed())return!1;
if(this.pd().hasFileLoaded(a))return!0;for(var b=this.panelNodes.size();0<=--b;)if(this.panelNodes.get(b).pd().hasFileLoaded(a))return this.si.siSetSelectedPanel(this.panelNodes.get(b).jsvp),!0;return!1},"~S");c(c$,"selectPanelByPeak",function(a,b,c){if(null==this.panelNodes)return null;for(var f=null,e=this.panelNodes.size();0<=--e;)this.panelNodes.get(e).pd().addPeakHighlight(null);f=this.pd().selectPeakByFileIndex(a,b,c);if(null!=f)this.setNode(JSV.common.PanelNode.findNode(this.selectedPanel,
this.panelNodes));else for(e=this.panelNodes.size();0<=--e;){var h=this.panelNodes.get(e);if(null!=(f=h.pd().selectPeakByFileIndex(a,b,c))){this.setNode(h);break}}return f},"~S,~S,~S");c(c$,"processPeakPickEvent",function(a){if(u(a,JSV.common.PeakInfo)){var b=this.pd().findMatchingPeakInfo(a);if(null==b){if(!"ALL".equals(a.getTitle()))return;for(var c=null,f=0;f<this.panelNodes.size();f++)if(null!=(b=this.panelNodes.get(f).pd().findMatchingPeakInfo(a))){c=this.panelNodes.get(f);break}if(null==c)return;
this.setNode(c)}a=b}else this.si.siSetSelectedPanel(a.getSource()),a=a.getPeakInfo();this.pd().addPeakHighlight(a);this.syncToJmol(a);a.isClearAll()?this.repaint(!1):this.pd().selectSpectrum(a.getFilePath(),a.getType(),a.getModel(),!0);this.si.siCheckCallbacks(a.getTitle())},"~O,~B");c(c$,"newStructToJmol",function(a){JU.Logger.info("sending new structure to Jmol:\n"+a);this.si.syncToJmol("struct:"+a)},"~S");c(c$,"syncToJmol",function(a){this.repaint(!0);this.returnFromJmolModel=a.getModel();this.si.syncToJmol(this.jmolSelect(a))},
"JSV.common.PeakInfo");c(c$,"sendPanelChange",function(){var a=this.pd(),b=a.getSpectrum(),c=b.getSelectedPeak();null==c&&(c=b.getModelPeakInfoForAutoSelectOnLoad());null==c&&(c=b.getBasePeakInfo());a.addPeakHighlight(c);JU.Logger.info(Thread.currentThread()+"JSViewer sendFrameChange "+this.selectedPanel);this.syncToJmol(c)});c(c$,"jmolSelect",function(a){var b="IR".equals(a.getType())||"RAMAN".equals(a.getType())?"vibration ON; selectionHalos OFF;":"vibration OFF; selectionhalos "+(null==a.getAtoms()?
"OFF":"ON");return"Select: "+a+' script="'+b+' " sourceID="'+this.pd().getSpectrum().sourceID+'"'},"JSV.common.PeakInfo");c(c$,"getPropertyAsJavaObject",function(a){var b=new java.util.Hashtable;if("SOURCEID".equalsIgnoreCase(a))return b.put(a,null==this.pd()?"":this.pd().getSpectrum().sourceID),b;if(null!=a&&a.startsWith("DATA_"))return b.put(a,""+JSV.common.JSVFileManager.htCorrelationCache.get(a.substring(5))),b;var c=!1;if(null!=a&&a.toUpperCase().startsWith("ALL ")||"all".equalsIgnoreCase(a))a=
a.substring(3).trim(),c=!0;"".equals(a)&&(a=null);var f=this.pd().getInfo(!0,a);if(!c&&null!=f)return f;null!=f&&b.put("current",f);c=new JU.Lst;for(f=0;f<this.panelNodes.size();f++)null!=this.panelNodes.get(f).jsvp&&c.addLast(this.panelNodes.get(f).getInfo(a));b.put("items",c);return b},"~S");c(c$,"getCoordinate",function(){if(!this.isClosed()){var a=this.pd().getClickedCoordinate();if(null!=a)return a.getXVal()+" "+a.getYVal()}return""});c(c$,"fillSpecList",function(a,b,c){var f,e=null,h=a.equalsIgnoreCase("NONE");
if(h||a.equalsIgnoreCase("all"))a="*";if(0>a.indexOf("*")){f=a.$plit(" ");a=new JU.SB;for(var l=0;l<f.length;l++){var j=f[l].indexOf(".");j!=f[l].lastIndexOf(".")&&(f[l]=f[l].substring(0,j+1)+f[l].substring(j+1).$replace(".","_"));a.append(f[l]).append(" ")}a=a.toString().trim()}if(a.equals("*"))f=JSV.common.ScriptToken.getTokens(JSV.common.PanelNode.getSpectrumListAsString(this.panelNodes));else if(a.startsWith('"')||a.startsWith("'"))f=JSV.common.ScriptToken.getTokens(a);else if(a=JU.PT.rep(a,"_",
" _ "),a=JU.PT.rep(a,"-"," - "),f=JSV.common.ScriptToken.getTokens(a),e=JSV.common.ScriptToken.getTokens(JSV.common.PanelNode.getSpectrumListAsString(this.panelNodes)),0==e.size())return null;var m=this.isClosed()?"1.":JSV.common.PanelNode.findNode(this.selectedPanel,this.panelNodes).id,m=m.substring(0,m.indexOf(".")+1);a=new JU.SB;for(var k=f.size(),p=null,l=0;l<k;l++){var n=f.get(l),j=NaN,q=-1;l+1<k&&f.get(l+1).equals("*")?(l+=2,j=Double.parseDouble(f.get(l))):l+1<k&&f.get(l+1).equals("_")&&(l+=
2,q=Integer.parseInt(f.get(l)));if(n.equals("-")){null==p&&(p=e.get(0));n=l+1==k?e.get(e.size()-1):f.get(++l);n.contains(".")||(n=m+n);for(j=0;j<e.size()&&!e.get(j).equals(p);)j++;for(j++;j<e.size()&&!p.equals(n);){var r=JSV.common.PanelNode.findNodeById(p=e.get(j++),this.panelNodes);b.addLast(r.pd().getSpectrumAt(0));a.append(",").append(p)}}else if(n.startsWith("'")&&n.endsWith("'")&&(n='"'+JU.PT.trim(n,"'")+'"'),n.startsWith('"'))for(var n=JU.PT.trim(n,'"'),q=this.panelNodes.size(),s=0;s<q;s++){if(r=
this.panelNodes.get(s),null!=r.fileName&&r.fileName.startsWith(n)||null!=r.frameTitle&&r.frameTitle.startsWith(n))this.addSpecToList(r.pd(),j,-1,b,c),a.append(",").append(r.id)}else n.contains(".")||(n=m+n),r=JSV.common.PanelNode.findNodeById(n,this.panelNodes),null!=r&&(p=n,this.addSpecToList(r.pd(),j,q,b,c),a.append(",").append(n),0<q&&a.append(".").appendI(q))}c&&0<b.size()&&(r=JSV.common.PanelNode.findNodeById(a.substring(1),this.panelNodes),null!=r&&(this.setNode(r),b.clear()));return h?"NONE":
0<a.length()?a.toString().substring(1):null},"~S,JU.Lst,~B");c(c$,"addSpecToList",function(a,b,c,f,e){e?(a.getSpectrumAt(0).setUserYFactor(Double.isNaN(b)?1:b),a.addToList(c-1,f)):a.selectFromEntireSet(c-1)},"JSV.common.PanelData,~N,~N,JU.Lst,~B");c(c$,"getSolutionColor",function(a){var b=this.pd().getSpectrum(),c=b.canShowSolutionColor()?JSV.common.JSViewer.getInterface("JSV.common.Visible"):null;return null==c?-1:c.getColour(b,a)},"~B");c(c$,"openDataOrFile",function(a,b,c,f,e,h,l,j){if("NONE".equals(b))return this.close("View*"),
0;this.si.writeStatus("");var m=null,k=null,p=null,n=!1;null!=f&&f.startsWith("cache://")&&(a=Jmol.Cache.get(b=f));if(null!=a)try{p=b,k=m=JSV.common.JSVFileManager.getFullPathName(b)}catch(q){if(!A(q,JSV.exception.JSVException))throw q;}else if(null!=c)n=!0,k=p=m="View"+ ++this.nViews;else if(null!=f)try{this.recentURL=m=(new java.net.URL(JSV.common.JSVFileManager.appletDocumentBase,f,null)).toString(),p=JSV.common.JSVFileManager.getTagName(m)}catch(r){if(A(r,java.net.MalformedURLException))m=this.apiPlatform.newFile(f),
p=m.getName(),k=m=m.getFullPath(),this.recentURL=null;else throw r;}b=-1;if(0<=(b=JSV.common.PanelNode.isOpen(this.panelNodes,m))||0<=(b=JSV.common.PanelNode.isOpen(this.panelNodes,f)))return n?(--this.nViews,this.setNode(this.panelNodes.get(b))):this.si.writeStatus(m+" is already open"),-1;!l&&!n&&this.close("all");this.si.setCursor(3);try{this.si.siSetCurrentSource(n?JSV.source.JDXSource.createView(c):JSV.source.JDXReader.createJDXSource(JSV.common.JSVFileManager.getBufferedReaderForData(a),m,this.obscureTitleFromUser===
Boolean.TRUE,this.loadImaginary,e,h,this.nmrMaxY))}catch(s){if(A(s,Exception))return alert(s.toString()),this.si.setCursor(0),this.isApplet&&this.selectedPanel.showMessage(s.toString(),"Error Opening File"),-3;throw s;}this.si.setCursor(0);System.gc();null==k?(k=this.currentSource.getFilePath(),null!=k&&(p=k.substring(k.lastIndexOf("/")+1))):this.currentSource.setFilePath(k);null==j&&!n&&(j=k);null!=j&&this.currentSource.setID(j);this.si.siSetLoaded(p,k);a=this.currentSource.getJDXSpectrum(0);if(null==
a)return-4;c=this.currentSource.getSpectra();JSV.common.Spectrum.process(c,this.irMode);c=this.interfaceOverlaid||a.isAutoOverlayFromJmolClick();n||c&&this.currentSource.isCompoundSource?this.combineSpectra(n?f:null):this.splitSpectra();this.pd().taintedAll=!0;n||this.si.siUpdateRecentMenus(m);return 0},"~O,~S,JU.Lst,~S,~N,~N,~B,~S");c(c$,"close",function(a){var b=0,c=null==a?-2:a.indexOf(">");0<c&&(b=JU.PT.parseInt(a.substring(c+1).trim()),a=a.substring(0,c).trim());"*".equals(a)&&(a="all");var f=
"all"===a;if(null==a||0==b&&a.equalsIgnoreCase("all"))this.closeSource(null);else{var e=a.equalsIgnoreCase("views"),c=new JU.Lst;a=a.$replace("\\","/");var h=this.panelNodes.size(),b=h-b;if(a.endsWith("*"))for(a=a.substring(0,a.length-1);0<=--h;)this.panelNodes.get(h).fileName.startsWith(a)&&c.addLast(this.panelNodes.get(h).source);else if(a.equalsIgnoreCase("selected"))for(a=null;0<=--h;)f=this.panelNodes.get(h).source,this.panelNodes.get(h).isSelected&&(null==a||a!==f)&&c.addLast(f),a=f;else if(f||
e||a.equalsIgnoreCase("simulations"))for(a=0;0<=--h&&a<b;){if(f||(e?this.panelNodes.get(h).isView:this.panelNodes.get(h).isSimulation))c.addLast(this.panelNodes.get(h).source),a++}else f=0==a.length?this.currentSource:JSV.common.PanelNode.findSourceByNameOrId(a,this.panelNodes),null!=f&&c.addLast(f);for(h=c.size();0<=--h;)this.closeSource(c.get(h));null==this.selectedPanel&&0<this.panelNodes.size()&&this.si.siSetSelectedPanel(JSV.common.PanelNode.getLastFileFirstNode(this.panelNodes))}},"~S");c(c$,
"load",function(a,b){var c=JSV.common.ScriptToken.getTokens(a),f=c.get(0),e=null,h=0;f.equalsIgnoreCase("ID")&&(e=JU.PT.trimQuotes(c.get(1)),f=c.get(2),h=2);var l=f.equalsIgnoreCase("APPEND"),j=f.equalsIgnoreCase("CHECK");(l||j)&&h++;0<h&&(f=c.get(h));null==b&&(b=this.defaultLoadScript);f.equals("?")?this.openFileFromDialog(l,!1,!1,b):f.equals("http://?")?this.openFileFromDialog(l,!0,!1,null):f.equals("$?")?this.openFileFromDialog(l,!0,!0,null):(f.equalsIgnoreCase("MOL")&&(f="http://SIMULATION/MOL="+
JU.PT.trimQuotes(c.get(++h))),!j&&!l&&(f.equals('""')&&null!=this.currentSource&&(f=this.currentSource.getFilePath()),this.close("all")),f=JU.PT.trimQuotes(f),f.startsWith("$")&&(f="http://SIMULATION/"+f.substring(1)),j=h+1<c.size()?Integer.$valueOf(c.get(++h)).intValue():-1,c=h+1<c.size()?Integer.$valueOf(c.get(++h)).intValue():j,this.si.siOpenDataOrFile(null,null,null,f,j,c,l,b,e))},"~S,~S");c(c$,"combineSpectra",function(a){var b=this.currentSource,c=b.getSpectra(),c=this.si.siGetNewJSVPanel2(c);
c.setTitle(b.getTitle());c.getTitle().equals("")&&(c.getPanelData().setViewTitle(b.getFilePath()),c.setTitle(a));this.si.siSetPropertiesFromPreferences(c,!0);this.spectraTree.createTree(++this.fileCount,b,[c]).getPanelNode().isView=!0;b=JSV.common.PanelNode.findNode(this.selectedPanel,this.panelNodes);b.setFrameTitle(a);b.isView=!0;this.autoShowLegend&&1==this.pd().getNumberOfGraphSets()&&b.setLegend(this.getDialog(JSV.common.Annotation.AType.OverlayLegend,null));this.si.siSetMenuEnables(b,!1)},"~S");
c(c$,"closeSource",function(a){for(var b=this.spectraTree.getRootNode(),c=null==a?null:a.getFilePath(),f=new JU.Lst,b=b.children();b.hasMoreElements();){var e=b.nextElement();if(null==c||e.getPanelNode().source.getFilePath().equals(c)){for(var h=e.children();h.hasMoreElements();){var l=h.nextElement();f.addLast(l);this.panelNodes.removeObj(l.getPanelNode())}f.addLast(e);if(null!=c)break}}this.spectraTree.deleteNodes(f);null==a&&(null!=this.currentSource&&this.currentSource.dispose(),this.currentSource=
null,null!=this.selectedPanel&&this.selectedPanel.dispose());this.currentSource===a&&(this.si.siSetSelectedPanel(null),this.si.siSetCurrentSource(null));for(f=c=0;f<this.panelNodes.size();f++)b=JU.PT.parseFloat(this.panelNodes.get(f).id),b>=c+1&&(c=w(Math.floor(b)));this.fileCount=c;System.gc();JU.Logger.checkMemory();this.si.siSourceClosed(a)},"JSV.source.JDXSource");c(c$,"setFrameAndTreeNode",function(a){null==this.panelNodes||(0>a||a>=this.panelNodes.size())||this.setNode(this.panelNodes.get(a))},
"~N");c(c$,"selectFrameNode",function(a){a=JSV.common.PanelNode.findNode(a,this.panelNodes);if(null==a)return null;this.spectraTree.setPath(this.spectraTree.newTreePath(a.treeNode.getPath()));this.setOverlayLegendVisibility(null,!1);return a},"JSV.api.JSVPanel");c(c$,"setSpectrum",function(a){if(0<=a.indexOf(".")){a=JSV.common.PanelNode.findNodeById(a,this.panelNodes);if(null==a)return!1;this.setNode(a)}else{a=JU.PT.parseInt(a);if(0>=a)return this.checkOverlay(),!1;this.setFrameAndTreeNode(a-1)}return!0},
"~S");c(c$,"splitSpectra",function(){for(var a=this.currentSource,b=a.getSpectra(),c=Array(b.size()),f=null,e=0;e<b.size();e++)f=b.get(e),f=this.si.siGetNewJSVPanel(f),this.si.siSetPropertiesFromPreferences(f,!0),c[e]=f;this.spectraTree.createTree(++this.fileCount,a,c);this.si.siGetNewJSVPanel(null);a=JSV.common.PanelNode.findNode(this.selectedPanel,this.panelNodes);this.si.siSetMenuEnables(a,!0)});c(c$,"selectedTreeNode",function(a){null!=a&&(a.isLeaf()?this.setNode(a.getPanelNode()):System.out.println("not a leaf"),
this.si.siSetCurrentSource(a.getPanelNode().source))},"JSV.api.JSVTreeNode");c(c$,"dispose",function(){this.fileHelper=null;null!=this.viewDialog&&this.viewDialog.dispose();this.viewDialog=null;null!=this.overlayLegendDialog&&this.overlayLegendDialog.dispose();this.overlayLegendDialog=null;null!=this.jsvpPopupMenu&&(this.jsvpPopupMenu.jpiDispose(),this.jsvpPopupMenu=null);if(null!=this.panelNodes)for(var a=this.panelNodes.size();0<=--a;)this.panelNodes.get(a).dispose(),this.panelNodes.remove(a)});
c(c$,"runScript",function(a){null==this.scriptQueue?this.si.siProcessCommand(a):this.scriptQueue.addLast(a)},"~S");c(c$,"requestRepaint",function(){null!=this.selectedPanel&&this.repaintManager.refresh()});c(c$,"repaintDone",function(){this.repaintManager.repaintDone()});c(c$,"checkOverlay",function(){null!=this.mainPanel&&this.markSelectedPanels(this.panelNodes,this.mainPanel.getCurrentPanelIndex());this.viewDialog=this.getDialog(JSV.common.Annotation.AType.Views,null)});c(c$,"markSelectedPanels",
function(a,b){for(var c=a.size();0<=--c;)a.get(c).isSelected=b==c},"JU.Lst,~N");c(c$,"execOverlayOffsetY",function(a){if(-2147483648==a){if(null==this.selectedPanel)return;a=this.selectedPanel.getInput("Enter a vertical offset in percent for stacked plots","Overlay",""+this.recentStackPercent);a=JU.PT.parseFloat(a);if(Float.isNaN(a))return;a=I(a)}this.recentStackPercent=a;this.parameters.viewOffset=a;this.isClosed()&&this.pd().setYStackOffsetPercent(a)},"~N");c(c$,"execScriptInline",function(a){0<
a.length&&(a=a.substring(6).trim());0==a.length&&(a=this.selectedPanel.getInput("Enter a JSpecView script","Script",this.recentScript));null!=a&&(this.recentScript=a,this.runScriptNow(a))},"~S");c(c$,"setDisplay",function(a){this.apiPlatform.setViewer(this,this.display=a);var b=G(2,0);this.apiPlatform.getFullScreenDimensions(a,b);this.setScreenDimension(b[0],b[1])},"~O");c(c$,"setScreenDimension",function(a,b){b=Math.min(b,this.maximumSize);a=Math.min(a,this.maximumSize);this.dimScreen.width==a&&
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b);break;case JSV.common.ScriptToken.ENDINDEX:this.initialEndIndex=Integer.parseInt(b);break;case JSV.common.ScriptToken.INTERFACE:this.checkOvelayInterface(b);break;case JSV.common.ScriptToken.IRMODE:this.setIRmode(b);break;case JSV.common.ScriptToken.MENUON:this.allowMenu=Boolean.parseBoolean(b);break;case JSV.common.ScriptToken.OBSCURE:null==this.obscureTitleFromUser&&(this.obscureTitleFromUser=Boolean.$valueOf(b));break;case JSV.common.ScriptToken.STARTINDEX:this.initialStartIndex=Integer.parseInt(b);
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"NLEVEL_MAX",100)}),k("JSV.common"),t(["JSV.common.Annotation","$.Coordinate"],"JSV.common.Measurement",null,function(){c$=q(function(){this.pt2=null;this.value=0;n(this,arguments)},JSV.common,"Measurement",JSV.common.Annotation);H(c$,function(){this.pt2=new JSV.common.Coordinate});c(c$,"setM1",function(a,b,c){this.setA(a,b,c,"",!1,!1,0,6);this.setPt2(this.getXVal(),this.getYVal());return this},"~N,~N,JSV.common.Spectrum");c(c$,"copyM",function(){var a=new JSV.common.Measurement;a.setA(this.getXVal(),
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function(){c$=q(function(){this.graphSets=this.jsvp=this.options=this.currentGraphSet=this.listeners=this.vwr=this.g2d0=this.g2d=null;this.currentSplitPoint=0;this.coordsClicked=this.coordClicked=this.thisWidget=null;this.isIntegralDrag=this.drawXAxisLeftToRight=this.shiftPressed=this.ctrlPressed=!1;this.xAxisLeftToRight=!0;this.scalingFactor=1;this.integralShiftMode=0;this.left=60;this.right=50;this.coordStr="";this.startupPinTip="Click to set.";this.title=null;this.endIndex=this.startIndex=this.thisHeight=
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JSV.common.Parameters.putInfo(b,c,"type",this.getSpectrumAt(0).getDataType());JSV.common.Parameters.putInfo(b,c,"title",this.title);JSV.common.Parameters.putInfo(b,c,"nSets",Integer.$valueOf(this.graphSets.size()));f=new JU.Lst;for(e=this.graphSets.size();0<=--e;)f.addLast(this.graphSets.get(e).getInfo(b,-1));c.put("sets",f);return c},"~B,~S");c(c$,"setBooleans",function(a,b){if(null==b)for(var c,f=a.getBooleans().entrySet().iterator();f.hasNext()&&((c=f.next())||1);)this.setBooleans(a,c.getKey());
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c(c$,"getTitle",function(){return this.title});c(c$,"refresh",function(){this.doReset=!0});c(c$,"addAnnotation",function(a){a=this.currentGraphSet.addAnnotation(a,this.getTitle());null!=a&&(this.title=a)},"JU.Lst");c(c$,"addPeakHighlight",function(a){for(var b=0;b<this.graphSets.size();b++)this.graphSets.get(b).addPeakHighlight(a)},"JSV.common.PeakInfo");c(c$,"selectPeakByFileIndex",function(a,b,c){var f=this.currentGraphSet.selectPeakByFileIndex(a,b,c);if(null==f)for(var e=this.graphSets.size();0<=
--e&&!(this.graphSets.get(e)!==this.currentGraphSet&&null!=(f=this.graphSets.get(e).selectPeakByFileIndex(a,b,c))););return f},"~S,~S,~S");c(c$,"setPlotColors",function(a){for(var b=this.graphSets.size();0<=--b;)this.graphSets.get(b).setPlotColors(a)},"~A");c(c$,"selectSpectrum",function(a,b,c,f){f&&this.currentGraphSet.selectSpectrum(a,b,c);if("ID".equals(b))this.jumpToSpectrumIndex(this.getCurrentSpectrumIndex(),!0);else for(f=0;f<this.graphSets.size();f++)this.graphSets.get(f)!==this.currentGraphSet&&
this.graphSets.get(f).selectSpectrum(a,b,c)},"~S,~S,~S,~B");c(c$,"hasFileLoaded",function(a){for(var b=this.graphSets.size();0<=--b;)if(this.graphSets.get(b).hasFileLoaded(a))return!0;return!1},"~S");c(c$,"clearAllView",function(){for(var a=this.graphSets.size();0<=--a;)this.graphSets.get(a).resetViewCompletely()});c(c$,"drawGraph",function(a,b,c,f,e,h){var l;this.gMain=a;this.display1D=!this.isLinked&&this.getBoolean(JSV.common.ScriptToken.DISPLAY1D);var j=40,m=50,k=this.isPrinting||this.doReset||
this.thisWidth!=f||this.thisHeight!=e;k&&(this.taintedAll=!0);this.taintedAll&&this.g2d.fillBackground(c,this.bgcolor);b!==a&&(this.g2d.fillBackground(b,null),a!==c&&this.g2d.fillBackground(a,null),this.g2d.setStrokeBold(a,!1));this.isPrinting?(j*=3,m*=3,this.scalingFactor=10,l=!1):(this.scalingFactor=1,l=this.getBoolean(JSV.common.ScriptToken.COORDINATESON),this.titleOn=this.getBoolean(JSV.common.ScriptToken.TITLEON),this.gridOn=this.getBoolean(JSV.common.ScriptToken.GRIDON));this.titleDrawn=this.doReset=
!1;this.thisWidth=f;this.thisHeight=e;for(var p=this.graphSets.size();0<=--p;)this.graphSets.get(p).drawGraphSet(a,b,c,f,e,this.left,this.right,j,m,k,this.taintedAll);this.titleOn&&(!this.titleDrawn&&this.taintedAll)&&this.drawTitle(a,e*this.scalingFactor,f*this.scalingFactor,this.getDrawTitle(this.isPrinting));l&&null!=this.coordStr&&this.drawCoordinates(b,j,this.thisWidth-this.right,j-20);h&&this.taintedAll&&(c=null!=this.commonFilePath?this.commonFilePath:1==this.graphSets.size()&&null!=this.currentGraphSet.getTitle(!0)?
this.getSpectrum().getFilePath():null,null!=c&&this.printFilePath(a,this.left,e,c));this.isPrinting&&this.printVersion(a,e);this.taintedAll=this.isPrinting||a===b},"~O,~O,~O,~N,~N,~B");c(c$,"drawCoordinates",function(a,b,c,f){this.g2d.setGraphicsColor(a,this.coordinatesColor);b=this.setFont(a,this.jsvp.getWidth(),0,12,!0);this.g2d.drawString(a,this.coordStr,c-b.stringWidth(this.coordStr),f)},"~O,~N,~N,~N");c(c$,"setFont",function(a,b,c,f,e){return this.g2d.setFont(a,this.getFont(a,b,c,f,e))},"~O,~N,~N,~N,~B");
c(c$,"printFilePath",function(a,b,c,f){b*=this.scalingFactor;c*=this.scalingFactor;0<f.indexOf("?")&&(f=f.substring(f.indexOf("?")+1));f=f.substring(f.lastIndexOf("/")+1);f=f.substring(f.lastIndexOf("\\")+1);this.g2d.setGraphicsColor(a,this.BLACK);var e=this.setFont(a,1E3,0,9,!0);b!=this.left*this.scalingFactor&&(b-=e.stringWidth(f));this.g2d.drawString(a,f,b,c-e.getHeight())},"~O,~N,~N,~S");c(c$,"printVersion",function(a,b){this.g2d.setGraphicsColor(a,this.BLACK);var c=this.setFont(a,100,0,12,!0),
f=this.jsvp.getApiPlatform().getDateFormat(null)+" JSpecView "+JSV.common.JSVersion.VERSION_SHORT,e=c.stringWidth(f);this.g2d.drawString(a,f,(this.thisWidth-this.right)*this.scalingFactor-e,b*this.scalingFactor-3*c.getHeight())},"~O,~N");c(c$,"drawTitle",function(a,b,c,f){f=f.$replace("\n"," ");var e=this.getFont(a,c,this.isPrinting||this.getBoolean(JSV.common.ScriptToken.TITLEBOLDON)?1:0,14,!0),h=e.stringWidth(f);h>c&&(e=w(14*c/h),10>e&&(e=10),e=this.getFont(a,c,this.isPrinting||this.getBoolean(JSV.common.ScriptToken.TITLEBOLDON)?
1:0,e,!0));this.g2d.setGraphicsColor(a,this.titleColor);this.setCurrentFont(this.g2d.setFont(a,e));this.g2d.drawString(a,f,this.isPrinting?this.left*this.scalingFactor:5,b-w(e.getHeight()*(this.isPrinting?2:0.5)))},"~O,~N,~N,~S");c(c$,"setCurrentFont",function(a){this.currentFont=a},"javajs.awt.Font");c(c$,"getFontHeight",function(){return this.currentFont.getAscent()});c(c$,"getStringWidth",function(a){return this.currentFont.stringWidth(a)},"~S");c(c$,"selectFromEntireSet",function(a){for(var b=
0,c=0;b<this.graphSets.size();b++)if(-2147483648==a)this.graphSets.get(b).setSelected(-1);else for(var f=this.graphSets.get(b).spectra,e=0;e<f.size();e++,c++)(0>a||a==c)&&this.graphSets.get(b).setSelected(e)},"~N");c(c$,"addToList",function(a,b){for(var c=0;c<this.spectra.size();c++)(0>a||c==a)&&b.addLast(this.spectra.get(c))},"~N,JU.Lst");c(c$,"scaleSelectedBy",function(a){for(var b=this.graphSets.size();0<=--b;)this.graphSets.get(b).scaleSelectedBy(a)},"~N");c(c$,"setCurrentGraphSet",function(a,
b,c){b=1<a.nSplit?a.getSplitPoint(b):a.getCurrentSpectrumIndex();var f=this.currentGraphSet!==a,e=f||this.currentSplitPoint!=b;this.currentGraphSet=a;this.currentSplitPoint=b;(f||1<a.nSplit&&e)&&this.setSpectrum(b,!0);if(!f){f=a.checkSpectrumClickedEvent(this.mouseX,this.mouseY,c);if(!f)return;this.currentSplitPoint=b=a.getCurrentSpectrumIndex();this.setSpectrum(b,!0)}this.jumpToSpectrumIndex(b,f||1<a.nSplit&&e)},"JSV.common.GraphSet,~N,~N");c(c$,"jumpToSpectrum",function(a){a=this.currentGraphSet.getSpectrumIndex(a);
this.jumpToSpectrumIndex(a,!0)},"JSV.common.Spectrum");c(c$,"jumpToSpectrumIndex",function(a,b){if(!(0>a||a>=this.currentGraphSet.nSpectra)){this.currentSplitPoint=a;b&&this.setSpectrum(this.currentSplitPoint,1<this.currentGraphSet.nSplit);var c=this.getSpectrum();this.notifySubSpectrumChange(c.getSubIndex(),c)}},"~N,~B");c(c$,"splitStack",function(a){this.currentGraphSet.splitStack(this.graphSets,a)},"~B");c(c$,"getNumberOfSpectraInCurrentSet",function(){return this.currentGraphSet.nSpectra});c(c$,
"getSourceID",function(){return this.getSpectrumAt(0).sourceID});c(c$,"getStartingPointIndex",function(a){return this.currentGraphSet.viewData.getStartingPointIndex(a)},"~N");c(c$,"getEndingPointIndex",function(a){return this.currentGraphSet.viewData.getEndingPointIndex(a)},"~N");c(c$,"haveSelectedSpectrum",function(){return this.currentGraphSet.haveSelectedSpectrum()});c(c$,"getShowAnnotation",function(a){return this.currentGraphSet.getShowAnnotation(a,-1)},"JSV.common.Annotation.AType");c(c$,"showAnnotation",
function(a,b){this.currentGraphSet.setShowAnnotation(a,b)},"JSV.common.Annotation.AType,Boolean");c(c$,"setYStackOffsetPercent",function(a){this.currentGraphSet.yStackOffsetPercent=a},"~N");c(c$,"setSpectrum",function(a,b){this.currentGraphSet.setSpectrum(a,b)},"~N,~B");c(c$,"getSpectrum",function(){return this.currentGraphSet.getSpectrum()});c(c$,"setSpecForIRMode",function(a){this.taintedAll=!0;var b=this.currentGraphSet.getSpectrum();this.currentGraphSet.setSpectrumJDX(a);for(var c=0;c<this.spectra.size();c++)this.spectra.get(c)===
b&&this.spectra.set(c,a)},"JSV.common.Spectrum");c(c$,"isShowAllStacked",function(){return this.currentGraphSet.showAllStacked});c(c$,"getCurrentSpectrumIndex",function(){return this.currentGraphSet.getCurrentSpectrumIndex()});c(c$,"getSpectrumAt",function(a){return null==this.currentGraphSet?null:this.currentGraphSet.getSpectrumAt(a)},"~N");c(c$,"addHighlight",function(a,b,c,f,e,h,l,j){(null==a?this.currentGraphSet:a).addHighlight(b,c,f,this.g2d.getColor4(e,h,l,j))},"JSV.common.GraphSet,~N,~N,JSV.common.Spectrum,~N,~N,~N,~N");
c(c$,"removeHighlight",function(a,b){this.currentGraphSet.removeHighlight(a,b)},"~N,~N");c(c$,"removeAllHighlights",function(){this.currentGraphSet.removeAllHighlights()});c(c$,"setZoom",function(a,b,c,f){this.currentGraphSet.setZoom(a,b,c,f);this.taintedAll=this.doReset=!0;this.notifyListeners(new JSV.common.ZoomEvent)},"~N,~N,~N,~N");c(c$,"resetView",function(){this.currentGraphSet.resetView()});c(c$,"previousView",function(){this.currentGraphSet.previousView()});c(c$,"nextView",function(){this.currentGraphSet.nextView()});
c(c$,"getSelectedIntegral",function(){return this.currentGraphSet.getSelectedIntegral()});c(c$,"advanceSubSpectrum",function(a){this.currentGraphSet.advanceSubSpectrum(a)},"~N");c(c$,"setSelectedIntegral",function(a){this.currentGraphSet.setSelectedIntegral(a)},"~N");c(c$,"scaleYBy",function(a){this.currentGraphSet.scaleYBy(a)},"~N");c(c$,"toPeak",function(a){this.currentGraphSet.toPeak(a)},"~N");c(c$,"getClickedCoordinate",function(){return this.coordClicked});c(c$,"getPickedCoordinates",function(a,
b){return JSV.common.Coordinate.getPickedCoordinates(this.coordsClicked,this.coordClicked,a,b)},"JSV.common.Coordinate,JSV.common.Coordinate");c(c$,"shiftSpectrum",function(a,b){return this.currentGraphSet.shiftSpectrum(a,b)},"~N,~N");c(c$,"findX",function(a,b){this.currentGraphSet.setXPointer(a,b)},"JSV.common.Spectrum,~N");c(c$,"setXPointers",function(a,b,c,f){this.currentGraphSet.setXPointer(a,b);this.currentGraphSet.setXPointer2(c,f)},"JSV.common.Spectrum,~N,JSV.common.Spectrum,~N");c(c$,"isCurrentGraphSet",
function(a){return a===this.currentGraphSet},"JSV.common.GraphSet");c(c$,"repaint",function(){this.jsvp.doRepaint(!1)});c(c$,"setToolTipText",function(a){this.jsvp.setToolTipText(a)},"~S");c(c$,"setHighlightColor",function(a){this.setColor(JSV.common.ScriptToken.HIGHLIGHTCOLOR,a)},"javajs.api.GenericColor");c(c$,"getInput",function(a,b,c){return this.jsvp.getInput(a,b,c)},"~S,~S,~S");c(c$,"getFont",function(a,b,c,f,e){f*=this.scalingFactor;e?400>b&&(f=b*f/400):250>b&&(f=b*f/250);b=this.jsvp.getFontFaceID(this.isPrinting?
this.printingFontName:this.displayFontName);return this.currentFont=javajs.awt.Font.createFont3D(b,c,f,f,this.jsvp.getApiPlatform(),a)},"~O,~N,~N,~N,~B");c(c$,"notifySubSpectrumChange",function(a,b){this.notifyListeners(new JSV.common.SubSpecChangeEvent(a,null==b?null:b.getTitleLabel()))},"~N,JSV.common.Spectrum");c(c$,"notifyPeakPickedListeners",function(a){null==a&&(a=new JSV.common.PeakPickEvent(this.jsvp,this.coordClicked,this.getSpectrum().getAssociatedPeakInfo(this.xPixelClicked,this.coordClicked)));
this.notifyListeners(a)},"JSV.common.PeakPickEvent");c(c$,"notifyListeners",function(a){for(var b=0;b<this.listeners.size();b++)null!=this.listeners.get(b)&&this.listeners.get(b).panelEvent(a)},"~O");c(c$,"escapeKeyPressed",function(a){this.currentGraphSet.escapeKeyPressed(a)},"~B");c(c$,"hasFocus",function(){return this.jsvp.hasFocus()});c(c$,"isMouseUp",function(){return this.mouseState===JSV.common.PanelData.Mouse.UP});c(c$,"doMouseMoved",function(a,b){this.mouseX=a;this.mouseY=b;this.mouseState=
JSV.common.PanelData.Mouse.UP;this.clickCount=0;var c=JSV.common.GraphSet.findGraphSet(this.graphSets,a,b);null!=c&&c.mouseMovedEvent(a,b)},"~N,~N");c(c$,"doMousePressed",function(a,b){this.mouseState=JSV.common.PanelData.Mouse.DOWN;var c=JSV.common.GraphSet.findGraphSet(this.graphSets,a,b);null!=c&&(this.setCurrentGraphSet(c,b,0),this.clickCount=++this.clickCount%3,c.checkWidgetEvent(a,b,!0))},"~N,~N");c(c$,"doMouseDragged",function(a,b){this.isIntegralDrag=(new Boolean(this.isIntegralDrag|this.ctrlPressed)).valueOf();
this.mouseState=JSV.common.PanelData.Mouse.DOWN;JSV.common.GraphSet.findGraphSet(this.graphSets,a,b)===this.currentGraphSet&&(this.currentGraphSet.checkWidgetEvent(a,b,!1),this.currentGraphSet.mouseMovedEvent(a,b))},"~N,~N");c(c$,"doMouseReleased",function(a,b,c){this.mouseState=JSV.common.PanelData.Mouse.UP;!(null==this.thisWidget&&null==this.currentGraphSet.pendingMeasurement)&&c&&(this.currentGraphSet.mouseReleasedEvent(a,b),this.thisWidget=null,this.isIntegralDrag=!1,this.integralShiftMode=0)},
"~N,~N,~B");c(c$,"doMouseClicked",function(a,b,c){var f=JSV.common.GraphSet.findGraphSet(this.graphSets,a,b);null!=f&&(this.setCurrentGraphSet(f,b,this.clickCount),f.mouseClickedEvent(a,b,this.clickCount,c),this.repaint())},"~N,~N,~B");c(c$,"hasCurrentMeasurements",function(a){return this.currentGraphSet.hasCurrentMeasurement(a)},"JSV.common.Annotation.AType");c(c$,"getDialog",function(a){return this.currentGraphSet.getDialog(a,-1)},"JSV.common.Annotation.AType");c(c$,"addDialog",function(a,b,c){this.currentGraphSet.addDialog(a,
b,c)},"~N,JSV.common.Annotation.AType,JSV.api.AnnotationData");c(c$,"getPeakListing",function(a,b){null!=a&&this.currentGraphSet.getPeakListing(-1,a,!0);this.currentGraphSet.setPeakListing(b)},"JSV.common.Parameters,Boolean");c(c$,"checkIntegral",function(a,b){this.currentGraphSet.checkIntegral(a,b)},"JSV.common.Parameters,~S");c(c$,"setIntegrationRatios",function(a){this.currentGraphSet.setIntegrationRatios(a)},"~S");c(c$,"getView",function(){return this.currentGraphSet.getCurrentView()});c(c$,"closeAllDialogsExcept",
function(a){for(var b=this.graphSets.size();0<=--b;)this.graphSets.get(b).closeDialogsExcept(a)},"JSV.common.Annotation.AType");c(c$,"removeDialog",function(a){this.currentGraphSet.removeDialog(a)},"JSV.dialog.JSVDialog");c(c$,"normalizeIntegral",function(){var a=this.getSelectedIntegral();if(null!=a){var b=a.text;0==b.length&&(b=""+a.getValue());a=this.getInput("Enter a new value for this integral","Normalize Integral",b);try{this.setSelectedIntegral(Double.parseDouble(a))}catch(c){if(!A(c,Exception))throw c;
}}});c(c$,"getDrawTitle",function(a){var b=null;a?b=this.printJobTitle:1==this.nSpectra?b=this.getSpectrum().getPeakTitle():null!=this.viewTitle?(null!=this.currentGraphSet.getTitle(!1)&&(b=this.getSpectrum().getPeakTitle()),null==b&&(b=this.viewTitle)):b=this.jsvp.getTitle().trim();0<=b.indexOf("\n")&&(b=b.substring(0,b.indexOf("\n")).trim());return b},"~B");c(c$,"getPrintJobTitle",function(a){var b=null;1==this.nSpectra?b=this.getSpectrum().getTitle():null!=this.viewTitle?(1==this.graphSets.size()&&
(b=this.currentGraphSet.getTitle(a)),null==b&&(b=this.viewTitle)):b=this.jsvp.getTitle().trim();0<=b.indexOf("\n")?b=b.substring(0,b.indexOf("\n")).trim():b.startsWith("$")&&(b=b.substring(1));return b},"~B");c(c$,"linkSpectra",function(a){a===JSV.common.PanelData.LinkMode.ALL&&(a=2==this.nSpectra?JSV.common.PanelData.LinkMode.AB:3==this.nSpectra?JSV.common.PanelData.LinkMode.ABC:JSV.common.PanelData.LinkMode.NONE);a!==JSV.common.PanelData.LinkMode.NONE&&a.toString().length!=this.nSpectra||this.setGraphSets(a)},
"JSV.common.PanelData.LinkMode");c(c$,"doZoomLinked",function(a,b,c,f,e,h){if(!this.linking){this.linking=!0;for(var l=a.getSpectrumAt(0),j=this.graphSets.size();0<=--j;){var m=this.graphSets.get(j);m!==a&&JSV.common.Spectrum.areXScalesCompatible(l,this.graphSets.get(j).getSpectrumAt(0),!1,!0)&&m.doZoom(b,0,c,0,h,!1,e,!1,f)}this.linking=!1}},"JSV.common.GraphSet,~N,~N,~B,~B,~B");c(c$,"clearLinkViews",function(a){if(!this.linking){this.linking=!0;for(var b=a.getSpectrum(),c=this.graphSets.size();0<=
--c;){var f=this.graphSets.get(c);f!==a&&JSV.common.Spectrum.areXScalesCompatible(b,this.graphSets.get(c).getSpectrum(),!1,!0)&&f.clearViews()}this.linking=!1}},"JSV.common.GraphSet");c(c$,"setlinkedXMove",function(a,b,c){if(!this.linking){this.linking=!0;for(var f=a.getSpectrum(),e=this.graphSets.size();0<=--e;){var h=this.graphSets.get(e);h!==a&&JSV.common.Spectrum.areXScalesCompatible(f,this.graphSets.get(e).getSpectrum(),!1,!0)&&null==h.imageView&&(c?h.setXPixelMovedTo(1.7976931348623157E308,
b,0,0):h.setXPixelMovedTo(b,1.7976931348623157E308,0,0))}this.linking=!1}},"JSV.common.GraphSet,~N,~B");c(c$,"set2DCrossHairsLinked",function(a,b,c,f){for(var e=this.graphSets.size();0<=--e;){var h=this.graphSets.get(e);h!==a&&h.set2DXY(b,c,f)}},"JSV.common.GraphSet,~N,~N,~B");c(c$,"dialogsToFront",function(a){this.currentGraphSet.dialogsToFront(a)},"JSV.common.Spectrum");c(c$,"setColor",function(a,b){null!=b&&this.options.put(a,JU.CU.toRGBHexString(b));switch(a){case JSV.common.ScriptToken.BACKGROUNDCOLOR:this.jsvp.setBackgroundColor(this.bgcolor=
b);this.taintedAll=!0;break;case JSV.common.ScriptToken.COORDINATESCOLOR:this.coordinatesColor=b;break;case JSV.common.ScriptToken.GRIDCOLOR:this.gridColor=b;this.taintedAll=!0;break;case JSV.common.ScriptToken.HIGHLIGHTCOLOR:this.highlightColor=b;255==this.highlightColor.getOpacity255()&&this.highlightColor.setOpacity255(150);break;case JSV.common.ScriptToken.INTEGRALPLOTCOLOR:this.integralPlotColor=b;this.taintedAll=!0;break;case JSV.common.ScriptToken.PEAKTABCOLOR:this.peakTabColor=b;this.taintedAll=
!0;break;case JSV.common.ScriptToken.PLOTCOLOR:for(var c=this.graphSets.size();0<=--c;)this.graphSets.get(c).setPlotColor0(b);this.taintedAll=!0;break;case JSV.common.ScriptToken.PLOTAREACOLOR:this.plotAreaColor=b;this.taintedAll=!0;break;case JSV.common.ScriptToken.SCALECOLOR:this.scaleColor=b;this.taintedAll=!0;break;case JSV.common.ScriptToken.TITLECOLOR:this.titleColor=b;this.taintedAll=!0;break;case JSV.common.ScriptToken.UNITSCOLOR:this.unitsColor=b;this.taintedAll=!0;break;case JSV.common.ScriptToken.ZOOMBOXCOLOR:this.zoomBoxColor=
b;break;case JSV.common.ScriptToken.ZOOMBOXCOLOR2:this.zoomBoxColor2=b;break;default:JU.Logger.warn("AwtPanel --- unrecognized color: "+a)}},"JSV.common.ScriptToken,javajs.api.GenericColor");c(c$,"getColor",function(a){switch(a){default:return JU.Logger.error("awtgraphset missing color "+a),this.BLACK;case JSV.common.ScriptToken.ZOOMBOXCOLOR2:return this.zoomBoxColor2;case JSV.common.ScriptToken.ZOOMBOXCOLOR:return this.zoomBoxColor;case JSV.common.ScriptToken.HIGHLIGHTCOLOR:return this.highlightColor;
case JSV.common.ScriptToken.INTEGRALPLOTCOLOR:return this.integralPlotColor;case JSV.common.ScriptToken.GRIDCOLOR:return this.gridColor;case JSV.common.ScriptToken.PEAKTABCOLOR:return this.peakTabColor;case JSV.common.ScriptToken.PLOTAREACOLOR:return this.plotAreaColor;case JSV.common.ScriptToken.SCALECOLOR:return this.scaleColor;case JSV.common.ScriptToken.TITLECOLOR:return this.titleColor;case JSV.common.ScriptToken.UNITSCOLOR:return this.unitsColor}},"JSV.common.ScriptToken");c(c$,"getOverlayLegendData",
function(){for(var a=this.currentGraphSet.nSpectra,b=Array(a),c=this.getSpectrumAt(0).getFilePath(),f=this.getSpectrumAt(a-1).getFilePath(),c=!c.equals(f),f=0;f<a;f++){var e=Array(3),h=this.getSpectrumAt(f);this.title=h.getTitle();c&&(this.title=JSV.common.JSVFileManager.getTagName(h.getFilePath())+" - "+this.title);h=this.getCurrentPlotColor(f);e[0]=new Integer(f+1);e[1]=h;e[2]=" "+this.title;b[f]=e}return b});c(c$,"setColorOrFont",function(a,b){if(null==b){for(var c,f=a.elementColors.entrySet().iterator();f.hasNext()&&
((c=f.next())||1);)this.setColorOrFont(a,c.getKey());this.setColorOrFont(a,JSV.common.ScriptToken.DISPLAYFONTNAME);this.setColorOrFont(a,JSV.common.ScriptToken.TITLEFONTNAME)}else{switch(b){case JSV.common.ScriptToken.DISPLAYFONTNAME:this.setFontName(b,a.displayFontName);return;case JSV.common.ScriptToken.TITLEFONTNAME:this.setFontName(b,a.titleFontName);return}this.setColor(b,a.getElementColor(b))}},"JSV.common.ColorParameters,JSV.common.ScriptToken");c(c$,"getCurrentPlotColor",function(a){return this.currentGraphSet.getPlotColor(a)},
"~N");c(c$,"setPrint",function(a,b){null==a?(this.options.putAll(this.optionsSaved),this.optionsSaved=null):(this.printJobTitle=a.title,this.printingFontName=b,this.printGraphPosition=a.position,this.optionsSaved=new java.util.Hashtable,this.optionsSaved.putAll(this.options),this.gridOn=a.showGrid,this.titleOn=a.showTitle,this.setBoolean(JSV.common.ScriptToken.XSCALEON,a.showXScale),this.setBoolean(JSV.common.ScriptToken.XUNITSON,a.showXScale),this.setBoolean(JSV.common.ScriptToken.YSCALEON,a.showYScale),
this.setBoolean(JSV.common.ScriptToken.YUNITSON,a.showYScale))},"JSV.common.PrintLayout,~S");c(c$,"showDialog",function(a){var b=this.getDialog(a);this.closeAllDialogsExcept(a);if(null!=b&&u(b,JSV.dialog.JSVDialog))return b.reEnable();var c=this.getCurrentSpectrumIndex();if(0>c)return this.jsvp.showMessage("To enable "+a+" first select a spectrum by clicking on it.",""+a),null;var f=this.getSpectrum(),e=this.vwr.getDialog(a,f);null==b&&a===JSV.common.Annotation.AType.Measurements&&(b=new JSV.common.MeasurementData(JSV.common.Annotation.AType.Measurements,
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this.printGraphPosition.equals("default")?j?(b=450,c=280):(b=280,c=450):this.printGraphPosition.equals("fit to page")?m=!0:j?(b=450,c=280,f=w(w(l-c)/2),e=w(w(h-b)/2)):(b=280,c=450,e=w(w(l-280)/2),f=w(w(h-450)/2)),this.g2d.translateScale(a,f,e,0.1),this.taintedAll=!0,this.drawGraph(a,a,a,w(c),w(b),m),this.isPrinting=!1,0;this.isPrinting=!1;return 1},"~O,~N,~N,~N,~N,~N,~N,~B,~N");e(c$,"keyPressed",function(a,b){if(this.isPrinting)return!1;this.checkKeyControl(a,!0);switch(a){case 27:case 127:case 8:return this.escapeKeyPressed(27!=
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b,c)}},"~S");c(c$,"setIRMode",function(a,b){for(var c=this.graphSets.size();0<=--c;)this.graphSets.get(c).setIRMode(a,b)},"JSV.common.Spectrum.IRMode,~S");z(self.c$);c$=s(JSV.common.PanelData,"LinkMode",Enum);c$.getMode=c(c$,"getMode",function(a){if(a.equals("*"))return JSV.common.PanelData.LinkMode.ALL;for(var b,c=0,f=JSV.common.PanelData.LinkMode.values();c<f.length&&((b=f[c])||1);c++)if(b.name().equalsIgnoreCase(a))return b;return JSV.common.PanelData.LinkMode.NONE},"~S");r(c$,"ALL",0,[]);r(c$,
"NONE",1,[]);r(c$,"AB",2,[]);r(c$,"ABC",3,[]);c$=y();z(self.c$);c$=s(JSV.common.PanelData,"Mouse",Enum);r(c$,"UP",0,[]);r(c$,"DOWN",1,[]);c$=y();C(c$,"defaultPrintHeight",450,"defaultPrintWidth",280,"topMargin",40,"bottomMargin",50,"leftMargin",60,"rightMargin",50)}),k("JSV.common"),t(null,"JSV.common.PanelNode",["JU.SB","JSV.common.Parameters"],function(){c$=q(function(){this.legend=this.id=this.jsvp=this.fileName=this.source=this.treeNode=null;this.isSimulation=this.isView=this.isSelected=!1;this.frameTitle=
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function(a){for(var b=a.size(),c=0==b?null:a.get(b-1),b=b-1;0<=--b&&a.get(b).source===c.source;)c=a.get(b);return null==c?null:c.jsvp},"JU.Lst");c(c$,"getInfo",function(a){var b=this.pd().getInfo(!1,a);JSV.common.Parameters.putInfo(a,b,"panelId",this.id);JSV.common.Parameters.putInfo(a,b,"panelFileName",this.fileName);JSV.common.Parameters.putInfo(a,b,"panelSource",this.source.getFilePath());return b},"~S")}),k("JSV.common"),t(null,"JSV.common.Parameters",["java.lang.Boolean","java.util.Hashtable",
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return b},"JSV.common.ScriptToken,~B");c(c$,"getBoolean",function(a){return Boolean.TRUE===this.htBooleans.get(a)},"JSV.common.ScriptToken");c$.isTrue=c(c$,"isTrue",function(a){return 0==a.length||Boolean.parseBoolean(a)},"~S");c$.getTFToggle=c(c$,"getTFToggle",function(a){return a.equalsIgnoreCase("TOGGLE")?null:JSV.common.Parameters.isTrue(a)?Boolean.TRUE:Boolean.FALSE},"~S");c(c$,"setP",function(a,b,c){switch(b){default:return;case JSV.common.ScriptToken.COORDINATESON:case JSV.common.ScriptToken.DISPLAY1D:case JSV.common.ScriptToken.DISPLAY2D:case JSV.common.ScriptToken.ENABLEZOOM:case JSV.common.ScriptToken.GRIDON:case JSV.common.ScriptToken.REVERSEPLOT:case JSV.common.ScriptToken.TITLEON:case JSV.common.ScriptToken.TITLEBOLDON:case JSV.common.ScriptToken.XSCALEON:case JSV.common.ScriptToken.XUNITSON:case JSV.common.ScriptToken.YSCALEON:case JSV.common.ScriptToken.YUNITSON:c=
JSV.common.Parameters.getTFToggle(c);if(null!=c){this.setBoolean(b,c.booleanValue());break}if(null==a)return;c=!a.getBoolean(b);switch(b){case JSV.common.ScriptToken.XSCALEON:this.setBoolean(JSV.common.ScriptToken.XUNITSON,c);a.setBoolean(JSV.common.ScriptToken.XUNITSON,c);break;case JSV.common.ScriptToken.YSCALEON:this.setBoolean(JSV.common.ScriptToken.YUNITSON,c),a.setBoolean(JSV.common.ScriptToken.YUNITSON,c)}this.setBoolean(b,c)}null!=a&&a.setBooleans(this,b)},"JSV.common.PanelData,JSV.common.ScriptToken,~S");
c$.isMatch=c(c$,"isMatch",function(a,b){return null==a||b.equalsIgnoreCase(a)},"~S,~S");c$.putInfo=c(c$,"putInfo",function(a,b,c,f){null!=f&&JSV.common.Parameters.isMatch(a,c)&&b.put(null==a?c:a,f)},"~S,java.util.Map,~S,~O")}),k("JSV.common"),t(["JSV.common.MeasurementData"],"JSV.common.PeakData",["java.lang.Double","JU.DF","JSV.common.Coordinate","$.PeakPick"],function(){c$=q(function(){this.maxY=this.minY=this.thresh=0;n(this,arguments)},JSV.common,"PeakData",JSV.common.MeasurementData);c(c$,"getThresh",
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c=c.maxXOnScale;this.thresh=this.myParams.peakListThreshold;Double.isNaN(this.thresh)&&(this.thresh=this.myParams.peakListThreshold=(this.minY+this.maxY)/2);var l=0,j=[f[0].getYVal(),l=f[1].getYVal(),0],m=0;if(e)for(e=2;e<f.length;e++){var k=j[e%3]=f[e].getYVal();if(l<this.thresh&&(j[(e-2)%3]>l&&l<k)&&(l=a?JSV.common.Coordinate.parabolicInterpolation(f,e-1):f[e-1].getXVal(),l>=h||l<=c))if(l=(new JSV.common.PeakPick).setValue(l,k,this.spec,null,0),this.addLast(l),100==++m)break;l=k}else for(e=2;e<
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c(c$,"getTitle",function(){return this.title});c(c$,"checkFileIndex",function(a,b,c){return null!=c?0<=this.atomKey.indexOf(c):b.equals(this.index)&&(a.equals(this.file)||a.equals(this.filePathForwardSlash))},"~S,~S,~S");c(c$,"checkFileTypeModel",function(a,b,c){return a.equals(this.file)&&this.checkModel(c)&&this.type.endsWith(b)},"~S,~S,~S");c(c$,"checkTypeModel",function(a,b){return this.checkType(a)&&this.checkModel(b)},"~S,~S");c(c$,"checkModel",function(a){return null!=a&&a.equals(this.model)},
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c(c$,"getSubIndex",function(){return this.isub}),e(c$,"toString",function(){return this.title}),k("JSV.common"),t(null,"JSV.common.ViewData",["JSV.common.Coordinate","$.ScaleData"],function(){c$=q(function(){this.thisScale=this.scaleData=null;this.iThisScale=this.nSpectra=0;n(this,arguments)},JSV.common,"ViewData");c(c$,"getScaleData",function(){return this.scaleData});c(c$,"getScale",function(){return this.thisScale});p(c$,function(a,b,c,e,g,h,l){this.nSpectra=l?1:a.size();this.scaleData=Array(this.nSpectra);
for(l=0;l<this.nSpectra;l++)this.scaleData[l]=new JSV.common.ScaleData(e[l],g[l]);this.init(a,b,c,h)},"JU.Lst,~N,~N,~A,~A,~B,~B");p(c$,function(a,b,c,e){this.nSpectra=a.size();var g=a.get(0).getXYCoords().length;this.scaleData=Array(1);this.scaleData[0]=new JSV.common.ScaleData(0,g-1);this.init(a,b,c,e)},"JU.Lst,~N,~N,~B");c(c$,"init",function(a,b,c,e){this.thisScale=this.scaleData[this.iThisScale=0];for(var g=0;g<this.scaleData.length;g++)this.scaleData[g].userYFactor=a.get(g).getUserYFactor(),this.scaleData[g].spectrumYRef=
a.get(g).getYRef();this.resetScaleFactors();var h=JSV.common.Coordinate.getMinX(a,this),l=JSV.common.Coordinate.getMaxX(a,this),j=JSV.common.Coordinate.getMinYUser(a,this),m=JSV.common.Coordinate.getMaxYUser(a,this);b!=c&&(j=b,m=c,j>m&&(g=j,j=m,m=g));a=a.get(0).isInverted();for(g=0;g<this.scaleData.length;g++)this.scaleData[g].setMinMax(h,l,j,m),this.scaleData[g].setScale(e,a)},"JU.Lst,~N,~N,~B");c(c$,"newSpectrum",function(a){this.init(a,0,0,!1)},"JU.Lst");c(c$,"setXRangeForSubSpectrum",function(a){this.setXRange(0,
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function(a){return this.scaleData[a%this.scaleData.length].endDataPointIndex},"~N");c(c$,"areYScalesSame",function(a,b){a%=this.scaleData.length;b%=this.scaleData.length;return this.scaleData[a].minYOnScale==this.scaleData[b].minYOnScale&&this.scaleData[a].maxYOnScale==this.scaleData[b].maxYOnScale},"~N,~N");c(c$,"setScale",function(a,b,c,e){this.iThisScale=a%this.scaleData.length;this.thisScale=this.scaleData[this.iThisScale];this.thisScale.setXYScale(b,c,e)},"~N,~N,~N,~B");c(c$,"resetScaleFactors",
function(){for(var a=0;a<this.scaleData.length;a++)this.scaleData[a].spectrumScaleFactor=1});c(c$,"scaleSpectrum",function(a,b){if(!(0>=b||a>=this.nSpectra))if(-2==a)this.thisScale.scale2D(b);else if(0>a)for(a=0;a<this.scaleData.length;a++)this.scaleData[a].scaleBy(b);else this.scaleData[a%this.scaleData.length].scaleBy(b)},"~N,~N");c(c$,"getNewScales",function(a,b,c,e){if(b)return this.scaleData;a%=this.scaleData.length;b=(c-this.thisScale.minYOnScale)/(this.thisScale.maxYOnScale-this.thisScale.minYOnScale);
e=(e-this.thisScale.minYOnScale)/(this.thisScale.maxYOnScale-this.thisScale.minYOnScale);c=Array(this.scaleData.length);for(var g=0;g<this.scaleData.length;g++)c[g]=0<=a&&g!=a?this.scaleData[g]:new JSV.common.ScaleData;JSV.common.ScaleData.copyScaleFactors(this.scaleData,c);JSV.common.ScaleData.copyYScales(this.scaleData,c);for(g=0;g<this.scaleData.length;g++)0<=a&&g!=a||(c[g].isShiftZoomedY=!0,c[g].minYOnScale=this.scaleData[g].minYOnScale*(1-b)+b*this.scaleData[g].maxYOnScale,c[g].maxYOnScale=this.scaleData[g].minYOnScale*
(1-e)+e*this.scaleData[g].maxYOnScale);return c},"~N,~B,~N,~N")}),k("JSV.common"),B(JSV.common,"XYScaleConverter"),k("JSV.common"),c$=s(JSV.common,"ZoomEvent"),p(c$,function(){}),k("JSV.dialog"),t(["JSV.api.AnnotationData","JSV.common.Annotation"],"JSV.dialog.JSVDialog",["java.lang.Double","JU.DF","$.PT","JSV.common.IntegralData","$.PeakData"],function(){c$=q(function(){this.myParams=this.xyData=this.combo1=this.txt3=this.txt2=this.txt1=this.jsvp=this.dialog=this.manager=this.$spec=this.vwr=this.title=
this.type=this.options=this.optionKey=null;this.precision=1;this.showHideButton=this.loc=null;this.defaultVisible=this.isNumeric=this.addApplyBtn=this.addCombo1=this.addClearBtn=!1;this.tableData=this.graphSetKey=this.subType=null;this.addUnits=!1;this.unitPtr=this.formatOptions=this.unitOptions=null;this.isON=!0;this.lastNorm=1;this.iSelected=this.iRowColSelected=-1;this.skipCreate=!1;this.iColSelected=this.iRowSelected=-1;n(this,arguments)},JSV.dialog,"JSVDialog",JSV.common.Annotation,JSV.api.AnnotationData);
c(c$,"setParams",function(a,b,c){this.title=a;this.vwr=b;this.$spec=c;this.manager=b.getDialogManager();this.jsvp=b.selectedPanel;this.myParams=b.getPlatformInterface("Parameters").setName("dialogParams");this.subType=null==c?"!":c.getTypeLabel();this.optionKey=this.type+"_"+this.subType;this.options=this.manager.getDialogOptions();null!=c&&(a=c.getDefaultAnnotationInfo(this.type),this.options.put(this.optionKey,a),this.unitOptions=a[0],this.formatOptions=a[1],this.unitPtr=this.options.get(this.optionKey+
"_unitPtr"),null==this.unitPtr&&(this.unitPtr=a[2]));switch(this.type){case JSV.common.Annotation.AType.Integration:this.addApplyBtn=this.defaultVisible=this.addClearBtn=this.isNumeric=!0;break;case JSV.common.Annotation.AType.Measurements:this.defaultVisible=this.addCombo1=this.addClearBtn=this.isNumeric=!0;break;case JSV.common.Annotation.AType.PeakList:this.defaultVisible=this.addApplyBtn=this.isNumeric=!0;break;case JSV.common.Annotation.AType.Views:this.defaultVisible=!0}this.initDialog();return this},
"~S,JSV.common.JSViewer,JSV.common.Spectrum");c(c$,"initDialog",function(){this.dialog=this.manager.getDialog(this);this.restoreDialogPosition(this.jsvp,this.getPosXY());this.dialog.setTitle(this.title);this.layoutDialog()});c(c$,"layoutDialog",function(){this.dialog.startLayout();this.addUniqueControls();this.isNumeric&&(this.getUnitOptions(),this.addCombo1&&(this.combo1=this.dialog.addSelectOption("cmbUnits","Units",this.unitOptions,this.unitPtr.intValue(),this.addUnits)),this.addApplyBtn&&this.dialog.addButton("btnApply",
"Apply"),this.showHideButton=this.dialog.addButton("btnShow","Show"),this.addClearBtn&&this.dialog.addButton("btnClear","Clear"));this.dialog.endLayout();this.checkEnables();this.dialog.setVisible(this.defaultVisible)});c(c$,"callbackAD",function(a,b){if(a.equals("FOCUS"))this.eventFocus();else if(a.equals("tableSelect"))this.tableSelect(b);else if(a.equals("btnClear"))this.clear();else if(a.equals("btnApply"))this.eventApply();else if(a.equals("btnShow")){var c=this.dialog.getText(this.showHideButton);
this.eventShowHide(c.equals("Show"))}else if(a.equals("cmbUnits"))this.setPrecision(this.dialog.getSelectedIndex(this.combo1));else if(a.startsWith("txt"))this.eventApply();else if(a.equals("windowClosing"))return this.done(),!0;null!=this.jsvp&&this.jsvp.doRepaint(!0);return!0},"~S,~S");c(c$,"addUniqueControls",function(){},"JSV.dialog.DialogManager");e(c$,"getAType",function(){return this.type});e(c$,"getGraphSetKey",function(){return this.graphSetKey});e(c$,"setGraphSetKey",function(a){this.graphSetKey=
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c(c$,"showMessage",function(a,b,c){this.manager.showMessageDialog(this.dialog,a,b,c)},"~S,~S,~N");c(c$,"setThreshold",function(a){this.dialog.setText(this.txt1,this.getThreasholdText(a))},"~N");c(c$,"setComboSelected",function(a){this.dialog.setSelectedIndex(this.combo1,a)},"~N");c(c$,"applyFromFields",function(){this.apply(null)});c(c$,"reEnable",function(){this.paramsReEnable();return this});c(c$,"dispose",function(){this.dialog.dispose()});c(c$,"setVisible",function(a){this.dialog.setVisible(a)},
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"~B");c(c$,"update",function(a,b,c){this.selectTableRow(-1);switch(this.type){case JSV.common.Annotation.AType.Integration:this.loadData();this.checkEnables();break;case JSV.common.Annotation.AType.Measurements:this.loadData();this.checkEnables();break;case JSV.common.Annotation.AType.PeakList:20<c&&this.applyFromFields();if(null==this.xyData||null==a||20<c)break;c=0;var e=1E100;a=a.getXVal();var g=this.xyData;b=Math.abs(b/20);for(var h=g.size();0<=--h;){var l=Math.abs(a-g.get(h).getXVal());l<e&&
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"setSpecShift",function(a){null!=this.xyData&&this.xyData.setSpecShift(a)},"~N");c(c$,"setType",function(a){this.type=a;switch(a){case JSV.common.Annotation.AType.Measurements:this.addUnits=!0}},"JSV.common.Annotation.AType");c(c$,"apply",function(a){try{switch(this.type){case JSV.common.Annotation.AType.Integration:var b=Double.parseDouble(a[0]),c=Double.parseDouble(a[1]);this.myParams.integralOffset=b;this.myParams.integralRange=c;this.myParams.integralDrawAll=!1;this.getData().update(this.myParams);
break;case JSV.common.Annotation.AType.NONE:return;case JSV.common.Annotation.AType.PeakList:this.skipCreate||(this.setThreshold(NaN),this.createData());this.skipCreate=!1;break;case JSV.common.Annotation.AType.Views:this.vwr.parameters.viewOffset=Double.parseDouble(a[0])}this.loadData();this.checkEnables();this.jsvp.doRepaint(!0)}catch(e){if(!A(e,Exception))throw e;}},"~A");c(c$,"done",function(){null!=this.jsvp&&null!=this.$spec&&this.jsvp.getPanelData().removeDialog(this);null!=this.xyData&&this.xyData.setState(this.isON);
this.saveDialogPosition(this.getPosXY());this.dispose();this.jsvp.doRepaint(!0)});c(c$,"restoreDialogPosition",function(a,b){if(null!=a){-2147483648==b[0]&&(b[0]=0,b[1]=-20);var c=this.manager.getLocationOnScreen(a),e=a.getHeight();this.loc=[Math.max(0,c[0]+b[0]),Math.max(0,c[1]+e+b[1])];this.dialog.setIntLocation(this.loc)}},"JSV.api.JSVPanel,~A");c(c$,"saveDialogPosition",function(a){try{var b=this.manager.getLocationOnScreen(this.dialog);a[0]+=b[0]-this.loc[0];a[1]+=b[1]-this.loc[1]}catch(c){if(!A(c,
Exception))throw c;}},"~A");c(c$,"getThreasholdText",function(a){if(Double.isNaN(a)){a=this.jsvp.getPanelData();var b=a.getSpectrum().isInverted()?0.1:0.9,c=a.getClickedCoordinate();a=null==c?(a.getView().minYOnScale*b+a.getView().maxYOnScale)*(1-b):c.getYVal()}return" "+JU.DF.formatDecimalDbl(a,1E3>a?2:-2)},"~N");c(c$,"checkVisible",function(){return this.vwr.pd().getShowAnnotation(this.type)});c(c$,"getUnitOptions",function(){var a=this.optionKey+"_format";null==this.options.get(a)&&this.options.put(a,
Integer.$valueOf(this.formatOptions[null==this.unitPtr?0:this.unitPtr.intValue()]))});c(c$,"eventFocus",function(){null!=this.$spec&&this.jsvp.getPanelData().jumpToSpectrum(this.$spec);switch(this.type){case JSV.common.Annotation.AType.Integration:0<=this.iRowSelected&&(this.iRowSelected++,this.tableCellSelect(-1,-1));break;case JSV.common.Annotation.AType.PeakList:this.createData(),this.skipCreate=!0}});c(c$,"eventApply",function(){switch(this.type){case JSV.common.Annotation.AType.PeakList:this.createData(),
this.skipCreate=!0}this.applyFromFields()});c(c$,"eventShowHide",function(a){(this.isON=a)&&this.eventApply();this.jsvp.doRepaint(!0);this.checkEnables()},"~B");c(c$,"clear",function(){this.setState(!0);null!=this.xyData&&(this.xyData.clear(),this.applyFromFields())});c(c$,"paramsReEnable",function(){switch(this.type){case JSV.common.Annotation.AType.PeakList:this.skipCreate=!0}this.setVisible(!0);this.isON=!0;this.applyFromFields()});c(c$,"tableCellSelect",function(a,b){System.out.println(a+" jSVDial "+
b);0>a&&(a=w(this.iRowColSelected/1E3),b=this.iRowColSelected%1E3,this.iRowColSelected=-1);var c=this.tableData[a][1],e=1E3*a+b;if(e!=this.iRowColSelected){this.iRowColSelected=e;System.out.println("Setting rc = "+this.iRowColSelected+" "+this.$spec);this.selectTableRow(this.iRowSelected);try{switch(this.type){case JSV.common.Annotation.AType.Integration:this.callback("SHOWSELECTION",c.toString());this.checkEnables();break;case JSV.common.Annotation.AType.PeakList:try{switch(b){case 6:case 5:case 4:var g=
Double.parseDouble(c),h=Double.parseDouble(this.tableData[a+3-b][1]);this.jsvp.getPanelData().setXPointers(this.$spec,g,this.$spec,h);break;default:this.jsvp.getPanelData().findX(this.$spec,Double.parseDouble(c))}}catch(l){if(A(l,Exception))this.jsvp.getPanelData().findX(this.$spec,1E100);else throw l;}this.jsvp.doRepaint(!1);break;case JSV.common.Annotation.AType.OverlayLegend:this.jsvp.getPanelData().setSpectrum(a,!1)}}catch(j){if(!A(j,Exception))throw j;}}},"~N,~N");c(c$,"loadData",function(){var a,
b,c;switch(this.type){case JSV.common.Annotation.AType.Integration:null==this.xyData&&this.createData();this.iSelected=-1;a=this.xyData.getMeasurementListArray(null);b=this.xyData.getDataHeader();c=[40,65,65,50];this.createTable(a,b,c);break;case JSV.common.Annotation.AType.Measurements:if(null==this.xyData)break;a=this.xyData.getMeasurementListArray(this.dialog.getSelectedItem(this.combo1).toString());b=this.xyData.getDataHeader();c=[40,65,65,50];this.createTable(a,b,c);break;case JSV.common.Annotation.AType.PeakList:null==
this.xyData&&this.createData();a=this.xyData.getMeasurementListArray(null);b=this.xyData.getDataHeader();c=[40,65,50,50,50,50,50];this.createTable(a,b,c);this.setTableSelectionEnabled(!0);break;case JSV.common.Annotation.AType.OverlayLegend:b=["No.","Plot Color","Title"],a=this.vwr.selectedPanel.getPanelData().getOverlayLegendData(),c=[30,60,250],this.createTable(a,b,c),this.setTableSelectionEnabled(!0)}});c(c$,"createData",function(){switch(this.type){case JSV.common.Annotation.AType.Integration:this.xyData=
new JSV.common.IntegralData(this.$spec,this.myParams);this.iSelected=-1;break;case JSV.common.Annotation.AType.PeakList:try{var a=Double.parseDouble(this.dialog.getText(this.txt1));this.myParams.peakListThreshold=a;this.myParams.peakListInterpolation=this.dialog.getSelectedItem(this.combo1).toString();this.myParams.precision=this.precision;var b=new JSV.common.PeakData(JSV.common.Annotation.AType.PeakList,this.$spec);b.setPeakList(this.myParams,this.precision,this.jsvp.getPanelData().getView());this.xyData=
b;this.loadData()}catch(c){if(!A(c,Exception))throw c;}}});c(c$,"setPrecision",function(a){this.precision=this.formatOptions[a]},"~N");c(c$,"tableSelect",function(a){if("true".equals(this.getField(a,"adjusting")))this.iColSelected=this.iRowSelected=-1,System.out.println("adjusting"+a);else{var b=JU.PT.parseInt(this.getField(a,"index"));switch("ROW COL ROWCOL".indexOf(this.getField(a,"selector"))){case 8:this.iColSelected=JU.PT.parseInt(this.getField(a,"index2"));case 0:this.iRowSelected=b;System.out.println("r set to "+
b);break;case 4:this.iColSelected=b,System.out.println("c set to "+b)}0<=this.iColSelected&&0<=this.iRowSelected&&this.tableCellSelect(this.iRowSelected,this.iColSelected)}},"~S");c(c$,"getField",function(a,b){a+="&";var c="&"+b+"=",e=a.indexOf(c);return 0>e?null:a.substring(e+c.length,a.indexOf("&",e+1))},"~S,~S")}),k("JSV.exception"),t(["java.lang.Exception"],"JSV.exception.JSVException",null,function(){c$=s(JSV.exception,"JSVException",Exception)}),k("JSV.js2d"),c$=s(JSV.js2d,"Display"),c$.getFullScreenDimensions=
c(c$,"getFullScreenDimensions",function(a,b){b[0]=a.width;b[1]=a.height},"~O,~A"),c$.hasFocus=c(c$,"hasFocus",function(){return!0},"~O"),c$.requestFocusInWindow=c(c$,"requestFocusInWindow",function(){},"~O"),c$.repaint=c(c$,"repaint",function(){},"~O"),c$.renderScreenImage=c(c$,"renderScreenImage",function(){},"javajs.api.PlatformViewer,~O,~O"),c$.setTransparentCursor=c(c$,"setTransparentCursor",function(){},"~O"),c$.setCursor=c(c$,"setCursor",function(){},"~N,~O"),c$.prompt=c(c$,"prompt",function(a,
b){var c=prompt(a,b);return null!=c?c:"null"},"~S,~S,~A,~B"),c$.convertPointFromScreen=c(c$,"convertPointFromScreen",function(){},"~O,JU.P3"),k("JSV.js2d"),c$=s(JSV.js2d,"Image"),c$.getWidth=c(c$,"getWidth",function(a){return a.imageWidth?a.imageWidth:a.width},"~O"),c$.getHeight=c(c$,"getHeight",function(a){return a.imageHeight?a.imageHeight:a.height},"~O"),c$.grabPixels=c(c$,"grabPixels",function(a,b,c){var e=null;if(a._buf32)return a._buf32;e=a.getImageData(0,0,b,c).data;return JSV.js2d.Image.toIntARGB(e)},
"~O,~N,~N"),c$.toIntARGB=c(c$,"toIntARGB",function(a){for(var b=w(a.length/4),c=G(b,0),e=0,g=0;e<b;g++)c[e++]=a[g++]<<16|a[g++]<<8|a[g++]|4278190080;return c},"~A"),c$.fromIntARGB=c(c$,"fromIntARGB",function(a,b){for(var c=b.length>>2,e=0,g=0;e<c;e++)b[g++]=a[e]>>16&255,b[g++]=a[e]>>8&255,b[g++]=a[e]&255,b[g++]=255},"~A,~A"),c$.getTextPixels=c(c$,"getTextPixels",function(a,b,c,e,g,h){c.fillStyle="#000000";c.fillRect(0,0,e,g);c.fillStyle="#FFFFFF";c.font=b.font;c.fillText(a,0,h);return JSV.js2d.Image.grabPixels(c,
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a.setYLabel(this.yLabel);a.setXYCoords(this.xyCoords);a.setContinuous(this.continuous);a.setIncreasing(this.xIncreases);a.observedFreq=this.observedFreq;a.observedNucl=this.observedNucl;a.offset=this.offset;a.dataPointNum=this.dataPointNum;a.shiftRefType=this.shiftRefType;a.$isHZtoPPM=this.$isHZtoPPM;a.numDim=this.numDim;a.nucleusX=this.nucleusX;a.nucleusY=this.nucleusY;a.freq2dX=this.freq2dX;a.freq2dY=this.freq2dY;a.setFilePath(this.filePath);a.nH=this.nH},"JSV.source.JDXDataObject");c(c$,"getTypeLabel",
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