biojs-vis-pdbviewer
Version:
A BioJS 2.0 component to view protein structures
150 lines (149 loc) • 3.83 kB
JavaScript
Clazz.declarePackage ("JU");
Clazz.load (null, "JU.GZIPHeader", ["JU.ZStream", "java.lang.IllegalArgumentException", "$.InternalError"], function () {
c$ = Clazz.decorateAsClass (function () {
this.text = false;
this.fhcrc = false;
this.time = 0;
this.xflags = 0;
this.os = 255;
this.extra = null;
this.name = null;
this.comment = null;
this.hcrc = 0;
this.crc = 0;
this.done = false;
this.mtime = 0;
Clazz.instantialize (this, arguments);
}, JU, "GZIPHeader", null, Cloneable);
Clazz.defineMethod (c$, "setModifiedTime",
function (mtime) {
this.mtime = mtime;
}, "~N");
Clazz.defineMethod (c$, "getModifiedTime",
function () {
return this.mtime;
});
Clazz.defineMethod (c$, "setOS",
function (os) {
if ((0 <= os && os <= 13) || os == 255) this.os = os;
else throw new IllegalArgumentException ("os: " + os);
}, "~N");
Clazz.defineMethod (c$, "getOS",
function () {
return this.os;
});
Clazz.defineMethod (c$, "setName",
function (name) {
this.name = JU.ZStream.getBytes (name);
}, "~S");
Clazz.defineMethod (c$, "getName",
function () {
if (this.name == null) return "";
try {
return String.instantialize (this.name, "ISO-8859-1");
} catch (e) {
if (Clazz.exceptionOf (e, java.io.UnsupportedEncodingException)) {
throw new InternalError (e.toString ());
} else {
throw e;
}
}
});
Clazz.defineMethod (c$, "setComment",
function (comment) {
this.comment = JU.ZStream.getBytes (comment);
}, "~S");
Clazz.defineMethod (c$, "getComment",
function () {
if (this.comment == null) return "";
try {
return String.instantialize (this.comment, "ISO-8859-1");
} catch (e) {
if (Clazz.exceptionOf (e, java.io.UnsupportedEncodingException)) {
throw new InternalError (e.toString ());
} else {
throw e;
}
}
});
Clazz.defineMethod (c$, "setCRC",
function (crc) {
this.crc = crc;
}, "~N");
Clazz.defineMethod (c$, "getCRC",
function () {
return this.crc;
});
Clazz.defineMethod (c$, "put",
function (d) {
var flag = 0;
if (this.text) {
flag |= 1;
}if (this.fhcrc) {
flag |= 2;
}if (this.extra != null) {
flag |= 4;
}if (this.name != null) {
flag |= 8;
}if (this.comment != null) {
flag |= 16;
}var xfl = 0;
if (d.level == 1) {
xfl |= 4;
} else if (d.level == 9) {
xfl |= 2;
}d.put_short (0x8b1f);
d.put_byteB (8);
d.put_byteB (flag);
d.put_byteB (this.mtime);
d.put_byteB ((this.mtime >> 8));
d.put_byteB ((this.mtime >> 16));
d.put_byteB ((this.mtime >> 24));
d.put_byteB (xfl);
d.put_byteB (this.os);
if (this.extra != null) {
d.put_byteB (this.extra.length);
d.put_byteB ((this.extra.length >> 8));
d.put_byte (this.extra, 0, this.extra.length);
}if (this.name != null) {
d.put_byte (this.name, 0, this.name.length);
d.put_byteB (0);
}if (this.comment != null) {
d.put_byte (this.comment, 0, this.comment.length);
d.put_byteB (0);
}}, "JU.Deflate");
Clazz.defineMethod (c$, "clone",
function () {
var gheader = Clazz.superCall (this, JU.GZIPHeader, "clone", []);
var tmp;
if (gheader.extra != null) {
tmp = Clazz.newByteArray (gheader.extra.length, 0);
System.arraycopy (gheader.extra, 0, tmp, 0, tmp.length);
gheader.extra = tmp;
}if (gheader.name != null) {
tmp = Clazz.newByteArray (gheader.name.length, 0);
System.arraycopy (gheader.name, 0, tmp, 0, tmp.length);
gheader.name = tmp;
}if (gheader.comment != null) {
tmp = Clazz.newByteArray (gheader.comment.length, 0);
System.arraycopy (gheader.comment, 0, tmp, 0, tmp.length);
gheader.comment = tmp;
}return gheader;
});
Clazz.defineStatics (c$,
"OS_MSDOS", 0x00,
"OS_AMIGA", 0x01,
"OS_VMS", 0x02,
"OS_UNIX", 0x03,
"OS_ATARI", 0x05,
"OS_OS2", 0x06,
"OS_MACOS", 0x07,
"OS_TOPS20", 0x0a,
"OS_WIN32", 0x0b,
"OS_VMCMS", 0x04,
"OS_ZSYSTEM", 0x08,
"OS_CPM", 0x09,
"OS_QDOS", 0x0c,
"OS_RISCOS", 0x0d,
"OS_UNKNOWN", 0xff);
});