bio-vis-expression-bar
Version:
Simple barchart to show expression levels across experiments
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{
"gene": "TR83257|c0_g1_i2",
"tern_order": ["A", "D", "B"],
"tooltip_order": ["A", "B", "D"],
"expression_bias": {},
"expression_bias_colors": {
"Azhurnaya": ["#377eb8", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#e41a1c"],
"Chinese Spring": ["#377eb8", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#bdbdbd", "#e41a1c"]
},
"tern": {},
"values": {
"TR83257|c0_g1_i2": {
"count": {
"24": {
"experiment": "24",
"value": 719.746
},
"25": {
"experiment": "25",
"value": 514.743
},
"8": {
"experiment": "8",
"value": 138.289
},
"9": {
"experiment": "9",
"value": 89.9829
},
"7": {
"experiment": "7",
"value": 71.1639
},
"6": {
"experiment": "6",
"value": 212.756
},
"5": {
"experiment": "5",
"value": 231.956
},
"4": {
"experiment": "4",
"value": 249.7
},
"3": {
"experiment": "3",
"value": 275.835
},
"2": {
"experiment": "2",
"value": 284.356
},
"1": {
"experiment": "1",
"value": 363.527
}
},
"tpm": {
"24": {
"experiment": "24",
"value": 2.83256
},
"25": {
"experiment": "25",
"value": 2.34698
},
"8": {
"experiment": "8",
"value": 1.06678
},
"9": {
"experiment": "9",
"value": 0.805878
},
"7": {
"experiment": "7",
"value": 0.768635
},
"6": {
"experiment": "6",
"value": 2.67539
},
"5": {
"experiment": "5",
"value": 2.36655
},
"4": {
"experiment": "4",
"value": 2.76278
},
"3": {
"experiment": "3",
"value": 3.08613
},
"2": {
"experiment": "2",
"value": 2.34083
},
"1": {
"experiment": "1",
"value": 2.60098
}
}
}
},
"factorOrder": {
"study": {
"Blackberry (R.genevieri) fruit ripening stages": 1,
"Raspberry (R.idaeus cv. Prestige) fruit ripening stages": 2
},
"Fruit ripening stage": {
"green": 1,
"immature": 2,
"ripe": 3
}
},
"longFactorName": {
"study": {
"Blackberry (R.genevieri) fruit ripening stages": "Blackberry ripe stages",
"Raspberry (R.idaeus cv. Prestige) fruit ripening stages": "Raspberry ripe stages"
},
"Fruit ripening stage": {
"green": "green",
"immature": "immature",
"ripe": "ripe"
}
},
"selectedFactors": {
"study": {
"Blackberry (R.genevieri) fruit ripening stages": true,
"Raspberry (R.idaeus cv. Prestige) fruit ripening stages": true
},
"Fruit ripening stage": {
"green": true,
"immature": true,
"ripe": true
}
},
"defaultFactorSelection": {
"Age": false,
"High level stress-disease": true,
"High level age": true,
"High level tissue": true,
"High level variety": true,
"Stress-disease": false,
"study": false,
"Tissue": false,
"Intermediate": false,
"Intermediate stress": false
},
"defaultFactorOrder": ["Fruit ripening stage"],
"experiments": {
"1": {
"name": "Sample_1618_LIB19133_LDI16504",
"group": "1"
},
"2": {
"name": "Sample_1618_LIB19134_LDI16505",
"group": "2"
},
"3": {
"name": "Sample_1618_LIB19135_LDI16506",
"group": "3"
},
"4": {
"name": "Sample_1618_LIB19136_LDI16507",
"group": "4"
},
"5": {
"name": "Sample_1618_LIB19137_LDI16508",
"group": "5"
},
"6": {
"name": "Sample_1618_LIB19138_LDI16509",
"group": "6"
},
"7": {
"name": "Sample_1618_LIB19139_LDI16510",
"group": "7"
},
"8": {
"name": "Sample_1618_LIB19140_LDI16511",
"group": "8"
},
"9": {
"name": "Sample_1618_LIB19141_LDI16512",
"group": "9"
},
"10": {
"name": "Sample_1636_LIB19419_LDI16762",
"group": "10"
},
"11": {
"name": "Sample_1636_LIB19420_LDI16763",
"group": "11"
},
"12": {
"name": "Sample_1636_LIB19421_LDI16764",
"group": "12"
},
"13": {
"name": "Sample_1636_LIB19422_LDI16765",
"group": "13"
},
"14": {
"name": "Sample_1636_LIB19423_LDI16766",
"group": "14"
},
"15": {
"name": "Sample_1636_LIB19424_LDI16767",
"group": "15"
},
"16": {
"name": "Sample_1636_LIB19425_LDI16768",
"group": "16"
},
"17": {
"name": "Sample_1636_LIB19426_LDI16769",
"group": "17"
},
"18": {
"name": "Sample_1636_LIB19427_LDI16770",
"group": "18"
}
},
"groups": {
"1": {
"name": "Sample_1618_LIB19133_LDI16504",
"description": "Sample_1618_LIB19133_LDI16504",
"factors": {
"Fruit ripening stage": "green",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"2": {
"name": "Sample_1618_LIB19134_LDI16505",
"description": "Sample_1618_LIB19134_LDI16505",
"factors": {
"Fruit ripening stage": "green",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"3": {
"name": "Sample_1618_LIB19135_LDI16506",
"description": "Sample_1618_LIB19135_LDI16506",
"factors": {
"Fruit ripening stage": "green",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"4": {
"name": "Sample_1618_LIB19136_LDI16507",
"description": "Sample_1618_LIB19136_LDI16507",
"factors": {
"Fruit ripening stage": "immature",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"5": {
"name": "Sample_1618_LIB19137_LDI16508",
"description": "Sample_1618_LIB19137_LDI16508",
"factors": {
"Fruit ripening stage": "immature",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"6": {
"name": "Sample_1618_LIB19138_LDI16509",
"description": "Sample_1618_LIB19138_LDI16509",
"factors": {
"Fruit ripening stage": "immature",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"7": {
"name": "Sample_1618_LIB19139_LDI16510",
"description": "Sample_1618_LIB19139_LDI16510",
"factors": {
"Fruit ripening stage": "ripe",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"8": {
"name": "Sample_1618_LIB19140_LDI16511",
"description": "Sample_1618_LIB19140_LDI16511",
"factors": {
"Fruit ripening stage": "ripe",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"9": {
"name": "Sample_1618_LIB19141_LDI16512",
"description": "Sample_1618_LIB19141_LDI16512",
"factors": {
"Fruit ripening stage": "ripe",
"study": "Blackberry (R.genevieri) fruit ripening stages"
}
},
"10": {
"name": "Sample_1636_LIB19419_LDI16762",
"description": "Sample_1636_LIB19419_LDI16762",
"factors": {
"Fruit ripening stage": "green",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"11": {
"name": "Sample_1636_LIB19420_LDI16763",
"description": "Sample_1636_LIB19420_LDI16763",
"factors": {
"Fruit ripening stage": "green",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"12": {
"name": "Sample_1636_LIB19421_LDI16764",
"description": "Sample_1636_LIB19421_LDI16764",
"factors": {
"Fruit ripening stage": "green",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"13": {
"name": "Sample_1636_LIB19422_LDI16765",
"description": "Sample_1636_LIB19422_LDI16765",
"factors": {
"Fruit ripening stage": "immature",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"14": {
"name": "Sample_1636_LIB19423_LDI16766",
"description": "Sample_1636_LIB19423_LDI16766",
"factors": {
"Fruit ripening stage": "immature",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"15": {
"name": "Sample_1636_LIB19424_LDI16767",
"description": "Sample_1636_LIB19424_LDI16767",
"factors": {
"Fruit ripening stage": "immature",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"16": {
"name": "Sample_1636_LIB19425_LDI16768",
"description": "Sample_1636_LIB19425_LDI16768",
"factors": {
"Fruit ripening stage": "ripe",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"17": {
"name": "Sample_1636_LIB19426_LDI16769",
"description": "Sample_1636_LIB19426_LDI16769",
"factors": {
"Fruit ripening stage": "ripe",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
},
"18": {
"name": "Sample_1636_LIB19427_LDI16770",
"description": "Sample_1636_LIB19427_LDI16770",
"factors": {
"Fruit ripening stage": "ripe",
"study": "Raspberry (R.idaeus cv. Prestige) fruit ripening stages"
}
}
}
}