bakana-takane/package.json

Extensions to the bakana single-cell analysis pipeline to accept takane-formatted datasets and results. This facilitates interoperability with the rest of the ArtifactDB ecosystem.

{
  "name": "bakana-takane",
  "version": "0.1.0",
  "description": "Extensions to the bakana single-cell analysis pipeline to accept takane-formatted datasets and results. This facilitates interoperability with the rest of the ArtifactDB ecosystem.",
  "type": "module",
  "main": "src/index.js",
  "scripts": {
    "test": "node --experimental-vm-modules node_modules/jest/bin/jest.js --testTimeout=1000000 --runInBand --detectOpenHandles --forceExit",
    "jsdoc": "npx jsdoc -r src README.md -d docs/built -c docs/jsdoc.config.json"
  },
  "repository": "github:kanaverse/bakana-takane",
  "homepage": "https://github.com/kanaverse/bakana-takane#readme",
  "bugs": "https://github.com/kanaverse/bakana-takane/issues",
  "keywords": [
    "bioinformatics",
    "single-cell",
    "scRNA-seq"
  ],
  "author": {
    "name": "Aaron Lun",
    "email": "infinite.monkeys.with.keyboards@gmail.com",
    "url": "https://github.com/LTLA"
  },
  "license": "MIT",
  "dependencies": {
    "bioconductor": "^0.3.1",
    "scran.js": "^3.0.2"
  },
  "devDependencies": {
    "docdash": "^2.0.1",
    "jest": "^29.7.0",
    "jsdoc": "^4.0.1",
    "bakana": "^3.0.1"
  }
}