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auspice

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Web app for visualizing pathogen evolution

www.npmjs.com/package/auspice

nextstrain/auspice

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import { loadFront } from 'yaml-front-matter'; import * as parsers from "../src/util/parseNarrative"; /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] title is correctly converted to a ## (h2) heading", () => { const md = parsers.parseTitleSlideTitle(loadFront(`--- title: "narrative title" ---`)); expect(md).toEqual("## narrative title\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] a single string representing authorship", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: "Author Name (perhaps multiple)" ---`)); expect(md).toEqual("### Author: Author Name (perhaps multiple)\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] single string of authors + string of link(s)", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: "Author Name (perhaps multiple)" authorLinks: "a_single_link" ---`)); expect(md).toEqual("### Author: [Author Name (perhaps multiple)](a_single_link)\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] single string of authors + string of link(s) + string affiliation", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: "Author Name (perhaps multiple)" authorLinks: "a_single_link" affiliations: "string of affiliations" ---`)); expect(md).toEqual("### Author: [Author Name (perhaps multiple)](a_single_link) <sup> 1 </sup>\n<sub><sup> 1 </sup> string of affiliations</sub>\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] single string of author(s), no links, string affiliation", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: "Author Name (perhaps multiple)" affiliations: "string of affiliations" ---`)); expect(md).toEqual("### Author: Author Name (perhaps multiple) <sup> 1 </sup>\n<sub><sup> 1 </sup> string of affiliations</sub>\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] single string of author(s) + array of links. Links should be ignored.", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: "Author Name (perhaps multiple)" authorLinks: - url_p1 - url_p2 ---`)); expect(md).toEqual("### Author: Author Name (perhaps multiple)\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] authors (array) + links (array)", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: - Person One - Person Two authorLinks: - url_p1 - url_p2 ---`)); expect(md).toEqual("### Author: [Person One](url_p1), [Person Two](url_p2)\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] authors (array) + links (array of different length). Links should be ignored.", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: - Person One - Person Two authorLinks: - url_p1 - url_p2 - url_p3 ---`)); expect(md).toEqual("### Author: Person One, Person Two\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] authors (array) + affiliations (string)", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: - Person One - Person Two affiliations: "shared affiliation for all authors" ---`)); expect(md).toEqual("### Author: Person One, Person Two <sup> 1 </sup>\n<sub><sup> 1 </sup> shared affiliation for all authors</sub>\n"); }); /* ---------------------------------------------------------------------- */ test("[narrative frontmatter] authors (array) + links (array) + affiliations (string)", () => { const md = parsers.parseNarrativeAuthors(loadFront(`--- authors: - Person One - Person Two authorLinks: - url_p1 - url_p2 affiliations: "shared affiliation for all authors" ---`)); expect(md).toEqual("### Author: [Person One](url_p1), [Person Two](url_p2) <sup> 1 </sup>\n<sub><sup> 1 </sup> shared affiliation for all authors</sub>\n"); }); /* ---------------------------------------------------------------------- */