auspice
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Web app for visualizing pathogen evolution
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<html lang="en"><head><meta charSet="utf-8"/><meta http-equiv="X-UA-Compatible" content="IE=edge"/><title>Customising Auspice · Auspice</title><meta name="viewport" content="width=device-width"/><meta name="generator" content="Docusaurus"/><meta name="description" content="Auspice allows you to customise the appearance and functionality of Auspice [when the client is built](/auspice/introduction/how-to-run#auspice-build)."/><meta name="docsearch:language" content="en"/><meta property="og:title" content="Customising Auspice · Auspice"/><meta property="og:type" content="website"/><meta property="og:url" content="https://nextstrain.github.io/auspice/"/><meta property="og:description" content="Auspice allows you to customise the appearance and functionality of Auspice [when the client is built](/auspice/introduction/how-to-run#auspice-build)."/><meta property="og:image" content="https://nextstrain.github.io/auspice/img/icon.svg"/><meta name="twitter:card" content="summary"/><meta 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target="_self">Docs</a></li></ul></nav></div></header></div></div><div class="navPusher"><div class="docMainWrapper wrapper"><div class="docsNavContainer" id="docsNav"><nav class="toc"><div class="toggleNav"><section class="navWrapper wrapper"><div class="navBreadcrumb wrapper"><div class="navToggle" id="navToggler"><div class="hamburger-menu"><div class="line1"></div><div class="line2"></div><div class="line3"></div></div></div><h2><i>›</i><span>Customising Auspice</span></h2><div class="tocToggler" id="tocToggler"><i class="icon-toc"></i></div></div><div class="navGroups"><div class="navGroup"><h3 class="navGroupCategoryTitle">Introduction</h3><ul class=""><li class="navListItem"><a class="navItem" href="/auspice/introduction/overview">Overview</a></li><li class="navListItem"><a class="navItem" href="/auspice/introduction/install">Install Auspice</a></li><li class="navListItem"><a class="navItem" href="/auspice/introduction/how-to-run">How to Run Auspice</a></li></ul></div><div class="navGroup"><h3 class="navGroupCategoryTitle">Advanced Functionality</h3><ul class=""><li class="navListItem"><a class="navItem" href="/auspice/advanced-functionality/second-trees">Displaying mutliple trees</a></li><li class="navListItem"><a class="navItem" href="/auspice/advanced-functionality/misc">Miscellaneous</a></li></ul></div><div class="navGroup"><h3 class="navGroupCategoryTitle">Customising Auspice</h3><ul class=""><li class="navListItem navListItemActive"><a class="navItem" href="/auspice/customise-client/introduction">Customising Auspice</a></li><li class="navListItem"><a class="navItem" href="/auspice/customise-client/api">Client Customisation API</a></li><li class="navListItem"><a class="navItem" href="/auspice/customise-client/requests">Requests Made from the Client</a></li></ul></div><div class="navGroup"><h3 class="navGroupCategoryTitle">Using a Custom Server</h3><ul class=""><li class="navListItem"><a class="navItem" href="/auspice/server/introduction">Auspice servers</a></li><li class="navListItem"><a class="navItem" href="/auspice/server/api">Server API</a></li><li class="navListItem"><a class="navItem" href="/auspice/server/authentication">Authentication</a></li></ul></div><div class="navGroup"><h3 class="navGroupCategoryTitle">Narratives</h3><ul class=""><li class="navListItem"><a class="navItem" href="/auspice/narratives/introduction">Communicating Results Using Narratives</a></li><li class="navListItem"><a class="navItem" href="/auspice/narratives/how-to-write">Writing a Narrative</a></li><li class="navListItem"><a class="navItem" href="/auspice/narratives/create-pdf">Converting a narrative to PDF</a></li></ul></div><div class="navGroup"><h3 class="navGroupCategoryTitle">Release Notes</h3><ul class=""><li class="navListItem"><a class="navItem" href="/auspice/releases/changelog">Changelog</a></li><li class="navListItem"><a class="navItem" href="/auspice/releases/v2">Auspice Version 2.0</a></li></ul></div><div class="navGroup"><h3 class="navGroupCategoryTitle">Contributing</h3><ul class=""><li class="navListItem"><a class="navItem" href="/auspice/contributing/overview">Contributing to Auspice</a></li></ul></div></div></section></div><script>
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</script></nav></div><div class="container mainContainer"><div class="wrapper"><div class="post"><header class="postHeader"><h1 class="postHeaderTitle">Customising Auspice</h1></header><article><div><span><p>Auspice allows you to customise the appearance and functionality of Auspice <a href="/auspice/introduction/how-to-run#auspice-build">when the client is built</a>.
This is how Auspice running locally and nextstrain.org look different, despite both using "Auspice".</p>
<p><img src="/auspice/assets/auspice-vs-nextstrain.png" alt="mumps">
<em>Notice the difference? Default Auspice (left) and nextstrain.org's customised version (right)</em></p>
<p>This is achieved by providing a JSON at build time to Auspice which defines the desired customisations via:</p>
<pre><code class="hljs css language-bash">auspice build --extend <JSON>
</code></pre>
<p><a href="https://github.com/nextstrain/nextstrain.org/blob/master/auspice/client/config.json">Here's</a> the file used by nextstrain.org to change the appearance of Auspice in the above image.</p>
<p>See the <a href="/auspice/customise-client/api">client customisation API</a> for the available options.</p>
</span></div></article></div><div class="docLastUpdate"><em>Last updated on 10/17/2019</em></div><div class="docs-prevnext"><a class="docs-prev button" href="/auspice/advanced-functionality/misc"><span class="arrow-prev">← </span><span>Miscellaneous</span></a><a class="docs-next button" href="/auspice/customise-client/api"><span>Client Customisation API</span><span class="arrow-next"> →</span></a></div></div></div><nav class="onPageNav"></nav></div><footer class="nav-footer" id="footer"><section class="sitemap"><div><a href="/auspice/"><img style="padding-left:20px" src="/auspice/img/logo-light.svg" alt="Auspice" width="66" height="58"/></a></div><div><h5>External Links</h5><a href="https://github.com/nextstrain/auspice">GitHub repo</a><a href="https://www.npmjs.com/package/auspice">NPM package</a><a href="https://nextstrain.org">Nextstrain</a></div><div><h5>Contact Us</h5><a href="mailto:hello@nextstrain.org">email</a><a href="https://twitter.com/hamesjadfield">twitter</a></div></section><section class="copyright">Website built by <a href="https://twitter.com/hamesjadfield">James Hadfield</a> using <a href="https://docusaurus.io">Docusaurus</a></section><section class="copyright">If you use auspice, please cite <a href="https://doi.org/10.1093/bioinformatics/bty407">Hadfield et al., 2018</a></section><section class="copyright">Copyright © 2014-2020 Richard Neher & Trevor Bedford</section></footer></div></body></html>