@seqera/node-red-seqera/docker/flows.json

Node-RED nodes for interacting with the Seqera Platform API

[
  {
    "id": "dae5714e049c0d25",
    "type": "tab",
    "label": "Flow 1",
    "disabled": false,
    "info": "",
    "env": []
  },
  {
    "id": "5f25af5b9d8216eb",
    "type": "group",
    "z": "dae5714e049c0d25",
    "name": "Welcome",
    "style": {
      "label": false,
      "stroke": "#6f2fa0",
      "fill": "#dbcbe7"
    },
    "nodes": ["9da7ad3ef289bd95", "8d971eb77b2a5cfd", "a085f65a040b6d62", "4ae2da586d311c30"],
    "x": 74,
    "y": 47,
    "w": 452,
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  },
  {
    "id": "2b76ac110625033d",
    "type": "group",
    "z": "dae5714e049c0d25",
    "name": "Introduction to Seqera Node-RED nodes",
    "style": {
      "label": true,
      "color": "#000000"
    },
    "nodes": [
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    "x": 74,
    "y": 259,
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  {
    "id": "9da7ad3ef289bd95",
    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "5f25af5b9d8216eb",
    "name": "Welcome to Node-RED + Seqera! 🎉 \\n Click here and look at the \"info\" tab in the sidebar -->",
    "info": "Thanks for setting up Node-RED with Seqera!\n\n**Click on the other comment nodes** to see how to get started.\n\nIf you need help or would like to contribute, please check out the GitHub repository for this extension: https://github.com/seqeralabs/node-red-seqera",
    "x": 300,
    "y": 100,
    "wires": []
  },
  {
    "id": "8d971eb77b2a5cfd",
    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "5f25af5b9d8216eb",
    "name": "Example flows",
    "info": "You can find the Seqera nodes in the sidebar on the left, under the heading \"Seqera\".\nTo jump-start your development, take a look at the examples that come with the extension:\n\n* Menu (top right `≡` button)\n* Import\n* Examples (modal's left sidebar)\n* @seqera/node-red-seqera dropdown\n* Choose an example and import into your current workflow\n\nThese are designed to be drop-in automation flow chunks and can often be used together.",
    "x": 200,
    "y": 200,
    "wires": []
  },
  {
    "id": "a085f65a040b6d62",
    "type": "comment",
    "z": "dae5714e049c0d25",
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    "name": "More information",
    "info": "Here are some resources to get you started:\n\n- [Node-RED tutorials](https://nodered.org/docs/tutorials/)\n- [Seqera Node-RED YouTube Playlist](#) _(coming soon)_\n- [Other Node-RED extensions](https://flows.nodered.org/)\n",
    "x": 400,
    "y": 200,
    "wires": []
  },
  {
    "id": "ed01ba29e91770f2",
    "type": "seqera-workflow-launch",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "launchpadName": "",
    "launchpadNameType": "str",
    "paramsKey": "{}",
    "paramsKeyType": "json",
    "workspaceId": "",
    "workspaceIdType": "str",
    "sourceWorkspaceId": "",
    "sourceWorkspaceIdType": "str",
    "x": 190,
    "y": 420,
    "wires": [["d881e2dd19406725"]]
  },
  {
    "id": "d881e2dd19406725",
    "type": "seqera-workflow-monitor",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "workflowId": "workflowId",
    "workflowIdType": "msg",
    "workspaceId": "",
    "workspaceIdType": "str",
    "keepPolling": true,
    "poll": "5",
    "pollUnits": "seconds",
    "x": 410,
    "y": 420,
    "wires": [[], [], []]
  },
  {
    "id": "1695e4f569ffd0cf",
    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "Workflows",
    "info": "Central to Seqera Platform are workflows.\n\nThese nodes allow you to launch and then monitor a workflow.\n\nThe _Poll workflows_ checks Platform for pipelines launched outside of Node-RED and sends events for new runs, which can then be monitored.\n\nThese nodes are designed to work together: the _Launch_ and _Poll workflows_ nodes emit `msg.workflowId` and the _Monitor_ node defaults to using this for the workflow ID to monitor.",
    "x": 160,
    "y": 380,
    "wires": []
  },
  {
    "id": "67283aae2341c413",
    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "A note on configuration",
    "info": "Below you can see the different Node-RED nodes available to you for working with Seqera Platform.\n\nThe comment nodes above each give a brief introduction.\n\nThe Seqera Node-RED plugin uses a shared _Configuration_ node which requires an API token, as well as an optional default workspace and API URL base.\n\nNone of the Seqera nodes will work until a configuration is set up and assigned.",
    "x": 200,
    "y": 300,
    "wires": []
  },
  {
    "id": "d5f52c36256163cc",
    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "Files (Data Explorer)",
    "info": "The _List files_ and _Poll files_ work with Seqera Platform's _Data Explorer_ **Data Links**.\n\nThey work in a similar way, except that _Poll files_ repeatedly checks a location to look for any new files.",
    "x": 190,
    "y": 540,
    "wires": []
  },
  {
    "id": "826ebd1a81f888f7",
    "type": "seqera-datalink-list",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "dataLinkName": "",
    "dataLinkNameType": "str",
    "basePath": "",
    "basePathType": "str",
    "prefix": "",
    "prefixType": "str",
    "pattern": "",
    "patternType": "str",
    "maxResults": "100",
    "maxResultsType": "num",
    "depth": "0",
    "depthType": "num",
    "workspaceId": "",
    "workspaceIdType": "str",
    "returnType": "files",
    "x": 160,
    "y": 580,
    "wires": [[]]
  },
  {
    "id": "73ea78f4fafa932c",
    "type": "seqera-datalink-poll",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "dataLinkName": "",
    "dataLinkNameType": "str",
    "basePath": "",
    "basePathType": "str",
    "prefix": "",
    "prefixType": "str",
    "pattern": "",
    "patternType": "str",
    "maxResults": "100",
    "maxResultsType": "num",
    "depth": "0",
    "depthType": "num",
    "workspaceId": "",
    "workspaceIdType": "str",
    "pollFrequency": "15",
    "pollUnits": "minutes",
    "returnType": "files",
    "x": 380,
    "y": 580,
    "wires": [[], []]
  },
  {
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    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "Datasets",
    "info": "This node adds a _Dataset_ in Seqera Platform for you.\n\nIt takes a CSV as input (which can be created dynamically in Node-RED) and returns the API response.\nThis includes the resolved CSV URL of the dataset (`payload.version.url`), which can be used to populate a workflow parameter.",
    "x": 160,
    "y": 660,
    "wires": []
  },
  {
    "id": "767870dfc9296cf3",
    "type": "seqera-dataset-add",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "datasetName": "",
    "datasetNameType": "str",
    "fileContents": "payload",
    "fileContentsType": "msg",
    "workspaceId": "",
    "workspaceIdType": "str",
    "description": "",
    "descriptionType": "str",
    "fileType": "csv",
    "x": 170,
    "y": 700,
    "wires": [[]]
  },
  {
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    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "Studios",
    "info": "Seqera Studios let you run interactive analysis sessions on your compute environments.\n\nThese nodes allow you to first add and then monitor a studio.\nThe central monitoring node output emits a message when a studio is in a _Running_ state and ready to use.\n\nThey're designed to work together: the _Add_ node emits `msg.studioId` and the _Monitor_ node defaults to using this for the Studio ID to monitor.",
    "x": 150,
    "y": 760,
    "wires": []
  },
  {
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    "type": "seqera-studios-add",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "studioName": "",
    "studioNameType": "str",
    "description": "",
    "descriptionType": "str",
    "containerUri": "",
    "containerUriType": "str",
    "computeEnvId": "",
    "computeEnvIdType": "str",
    "mountData": "",
    "mountDataType": "str",
    "cpu": "2",
    "cpuType": "num",
    "memory": "8192",
    "memoryType": "num",
    "gpu": "0",
    "gpuType": "num",
    "condaEnvironment": "",
    "condaEnvironmentType": "str",
    "lifespanHours": "",
    "lifespanHoursType": "num",
    "isPrivate": false,
    "isPrivateType": "bool",
    "spot": false,
    "spotType": "bool",
    "autoStart": true,
    "autoStartType": "bool",
    "workspaceId": "",
    "workspaceIdType": "str",
    "x": 170,
    "y": 800,
    "wires": [["fc630486d3370917"]]
  },
  {
    "id": "fc630486d3370917",
    "type": "seqera-studios-monitor",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "studioId": "studioId",
    "studioIdType": "msg",
    "workspaceId": "",
    "workspaceIdType": "str",
    "keepPolling": true,
    "poll": 5,
    "pollUnits": "seconds",
    "x": 400,
    "y": 800,
    "wires": [[], [], []]
  },
  {
    "id": "4ae2da586d311c30",
    "type": "comment",
    "z": "dae5714e049c0d25",
    "g": "5f25af5b9d8216eb",
    "name": "Documentation",
    "info": "Node-RED has a very useful tab in the right hand sidebar:\n\n- The 📕 _Help_ tab (<kbd>⌘+g h</kbd>)\n\nTry to keep this open most of the time: as you click different nodes, it will show contextual information.\nAll of the Seqera nodes and and all of the core Node-RED nodes will have extensive docs here.\n\nIf you prefer, you can also read documentation about the Seqera nodes on the plugin website: https://seqeralabs.github.io/node-red-seqera/",
    "x": 300,
    "y": 160,
    "wires": []
  },
  {
    "id": "d02a10054509db60",
    "type": "seqera-workflow-poll",
    "z": "dae5714e049c0d25",
    "g": "2b76ac110625033d",
    "name": "",
    "seqera": "",
    "search": "",
    "searchType": "str",
    "maxResults": "50",
    "maxResultsType": "num",
    "workspaceId": "",
    "workspaceIdType": "str",
    "pollFrequency": "1",
    "pollUnits": "minutes",
    "x": 180,
    "y": 460,
    "wires": [[], ["d881e2dd19406725"]]
  },
  {
    "id": "4a6f4ab534631dfe",
    "type": "global-config",
    "env": [],
    "modules": {
      "@seqera/node-red-seqera": "1.4.1"
    }
  }
]