UNPKG

@sakitam-gis/kriging

Version:

kriging.js is a Javascript library providing spatial prediction and mapping capabilities via the ordinary kriging algorithm.

109 lines (72 loc) 4.29 kB
kriging.js [![Build Status](https://www.travis-ci.org/sakitam-gis/kriging.js.svg?branch=master)](https://www.travis-ci.org/sakitam-gis/kriging.js) [![codecov](https://codecov.io/gh/sakitam-gis/kriging.js/branch/master/graph/badge.svg)](https://codecov.io/gh/sakitam-gis/kriging.js) [![NPM downloads](https://img.shields.io/npm/dm/@sakitam-gis/kriging.svg)](https://npmjs.org/package/@sakitam-gis/kriging) ![JS gzip size](http://img.badgesize.io/https://unpkg.com/@sakitam-gis/kriging/dist/kriging.js?compression=gzip&label=gzip%20size:%20JS) [![Npm package](https://img.shields.io/npm/v/@sakitam-gis/kriging.svg)](https://www.npmjs.org/package/@sakitam-gis/kriging) [![GitHub stars](https://img.shields.io/github/stars/sakitam-gis/kriging.js.svg)](https://github.com/sakitam-gis/kriging.js/stargazers) [![GitHub license](https://img.shields.io/github/license/sakitam-gis/kriging.js.svg)](https://github.com/sakitam-gis/kriging.js/blob/master/LICENSE) ## Dev ```bash git clone https://github.com/sakitam-gis/kriging.js npm install or yarn npm run dev npm run build ``` ## Use ### CDN ```bash https://unpkg.com/@sakitam-gis/kriging/dist/kriging.min.js https://unpkg.com/@sakitam-gis/kriging/dist/kriging.js ``` ### PACKAGES ```bash npm i @sakitam-gis/kriging # node const kriging = require('@sakitam-gis/kriging'); # es import kriging from '@sakitam-gis/kriging'; # or import { train, grid } from '@sakitam-gis/kriging'; ``` **kriging.js** is a Javascript library providing spatial prediction and mapping capabilities via the ordinary kriging algorithm. Kriging is a type of gaussian process where 2-dimensional coordinates are mapped to some target variable using kernel regression. This algorithm has been specifically designed to accurately model smaller data sets by assigning a prior to the variogram parameters. Fitting a Model --------------- The first step is to link **kriging.js** to your html code and assign your coordinate and target variables to 3 separate arrays. ``` html <script src="kriging.js" type="text/javascript"></script> <script type="text/javascript"> var t = [ /* Target variable */ ]; var x = [ /* X-axis coordinates */ ]; var y = [ /* Y-axis coordinates */ ]; var model = "exponential"; var sigma2 = 0, alpha = 100; var variogram = kriging.train(t, x, y, model, sigma2, alpha); </script> ``` The train method in the kriging object fits your input to whatever variogram model you specify - gaussian, exponential or spherical - and returns a variogram object. Error and Bayesian Prior ------------------------ Notice the σ<sup>2</sup> (sigma2) and α (alpha) variables, these correspond to the variance parameters of the gaussian process and the prior of the variogram model, respectively. A diffuse α prior is typically used; a formal mathematical definition of the model is provided below. Predicting New Values --------------------- Values can be predicted for new coordinate pairs by using the predict method in the kriging object. ``` javascript var xnew, ynew /* Pair of new coordinates to predict */; var tpredicted = kriging.predict(xnew, ynew, variogram); ``` Creating a Map -------------- Variogram and Probability Model ------------------------------- The various variogram models can be interpreted as kernel functions for 2-dimensional coordinates **a**, **b** and parameters nugget, range, sill and A. Reparameterized as a linear function, with w = [nugget, (sill-nugget)/range], this becomes: - Gaussian: k(**a**,**b**) = w[0] + w[1] * ( 1 - exp{ -( ||**a**-**b**|| / range )<sup>2</sup> / A } ) - Exponential: k(**a**,**b**) = w[0] + w[1] * ( 1 - exp{ -( ||**a**-**b**|| / range ) / A } ) - Spherical: k(**a**,**b**) = w[0] + w[1] * ( 1.5 * ( ||**a**-**b**|| / range ) - 0.5 * ( ||**a**-**b**|| / range )<sup>3</sup> ) The variance parameter α of the prior distribution for w should be manually set, according to: - w ~ N(w|**0**, α**I**) Using the fitted kernel function hyperparameters and setting K as the Gram matrix, the prior and likelihood for the gaussian process become: - **y** ~ N(**y**|**0**, **K**) - **t**|**y** ~ N(**t**|**y**, σ<sup>2</sup>**I**) The variance parameter σ<sup>2</sup> of the likelihood reflects the error in the gaussian process and should be manually set.