@rcsb/rcsb-saguaro-app
Version:
RCSB 1D Saguaro Web App
22 lines • 1.25 kB
JavaScript
import { __awaiter } from "tslib";
import { RcsbFvAbstractModule } from "./RcsbFvAbstractModule";
import { PairwiseAlignmentBuilder } from "../../RcsbUtils/PairwiseAlignmentTools/PairwiseAlignmentBuilder";
import { Assertions } from "../../RcsbUtils/Helpers/Assertions";
var assertDefined = Assertions.assertDefined;
export class RcsbFvPairwiseAlignment extends RcsbFvAbstractModule {
protectedBuild() {
return __awaiter(this, void 0, void 0, function* () {
var _a;
const buildConfig = this.buildConfig;
assertDefined(buildConfig.psa);
const pab = new PairwiseAlignmentBuilder(buildConfig.psa);
const config = Object.assign({ rowTitleWidth: 120, length: pab.getLength(), includeAxis: !buildConfig.psa.pairwiseView }, (_a = buildConfig.additionalConfig) === null || _a === void 0 ? void 0 : _a.boardConfig);
this.boardConfigData = Object.assign(Object.assign({}, this.boardConfigData), config);
this.rowConfigData = buildConfig.psa.pairwiseView ? pab.buildPairwiseAlignment() : pab.buildReferenceAlignment();
return void 0;
});
}
concatAlignmentAndAnnotationTracks() {
}
}
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