@rcsb/rcsb-saguaro-3d/lib/RcsbFv3D/RcsbFv3DAlignmentProvider.d.ts

RCSB Molstar/Saguaro Web App

import { RcsbFv3DAbstract } from "./RcsbFv3DAbstract";
import { RcsbFvAdditionalConfig, RcsbFvModulePublicInterface, RcsbModuleDataProviderInterface } from "@rcsb/rcsb-saguaro-app/lib/RcsbFvWeb/RcsbFvModule/RcsbFvModuleInterface";
import { LoadMolstarInterface, LoadMolstarReturnType } from "../RcsbFvStructure/StructureViewers/MolstarViewer/MolstarActionManager";
import { ViewerProps } from "@rcsb/rcsb-molstar/build/src/viewer";
import { RcsbFv3DCssConfig } from "./RcsbFv3DComponent";
import { MsaPfvManagerInterface } from "../RcsbFvSequence/SequenceViews/RcsbView/PfvManagerFactoryImplementation/MsaPfvManagerFactory";
import { LoadParamsProviderInterface } from "../RcsbFvStructure/StructureUtils/StructureLoaderInterface";
import { AlignmentTrajectoryParamsType } from "../RcsbFvStructure/StructureViewers/MolstarViewer/TrajectoryPresetProvider/AlignmentTrajectoryPresetProvider";
import { AbstractViewInterface } from "../RcsbFvSequence/SequenceViews/AbstractView";
import { TrajectoryHierarchyPresetProvider } from "molstar/lib/mol-plugin-state/builder/structure/hierarchy-preset";
import { ReactNode } from "react";
export interface RcsbFv3DDataProviderInterface {
    elementId?: string;
    config: {
        dataProvider: RcsbModuleDataProviderInterface;
        loadParamsProvider?: LoadParamsProviderInterface<{
            entryId: string;
            instanceId: string;
        }, LoadMolstarInterface<AlignmentTrajectoryParamsType, LoadMolstarReturnType>>;
        title?: string;
        subtitle?: string;
        additionalContent?(props: AbstractViewInterface): ReactNode;
    };
    additionalConfig?: RcsbFvAdditionalConfig;
    molstarProps?: Partial<ViewerProps>;
    cssConfig?: RcsbFv3DCssConfig;
    trajectoryProvider?: TrajectoryHierarchyPresetProvider<AlignmentTrajectoryParamsType, LoadMolstarReturnType>;
}
type AlignmentLoadMolstarType = LoadMolstarInterface<AlignmentTrajectoryParamsType, LoadMolstarReturnType>;
export declare class RcsbFv3DAlignmentProvider extends RcsbFv3DAbstract<MsaPfvManagerInterface<[RcsbModuleDataProviderInterface]>, AlignmentLoadMolstarType | undefined, LoadMolstarReturnType, {
    viewerElement: string | HTMLElement;
    viewerProps: Partial<ViewerProps>;
}, {
    context: {
        id: string;
    };
    module: RcsbFvModulePublicInterface;
}> {
    constructor(params: RcsbFv3DDataProviderInterface);
}
export {};