@phema/cql-execution
Version:
An execution framework for the Clinical Quality Language (CQL)
484 lines (483 loc) • 19.5 kB
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<a href="../index.html">All files</a> / <a href="index.html">src</a> cql-patient.coffee
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<span class="strong">92.31% </span>
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<span class="cline-any cline-neutral"> </span></td><td class="text"><pre class="prettyprint lang-js">DT = require './datatypes/datatypes'
FHIR = require './fhir/models'
{ typeIsArray } = require './util/util'
toDate = <span class="fstat-no" title="function not covered" >(s</span>tr) ->
if typeof str is 'string' then new Date(str)
else null
class Record
constructor: (@json) ->
get: (field) ->
@json[field]
getDate: (field) ->
val = @get field
if val? then DT.DateTime.parse(val) else null
getInterval: (field) ->
val = @get field
if val? and typeof val is 'object'
start = if val.start? then DT.DateTime.parse val.start else <span class="branch-1 cbranch-no" title="branch not covered" >null</span>
end = if val.end? then DT.DateTime.parse val.end else <span class="branch-1 cbranch-no" title="branch not covered" >null</span>
new DT.Interval(start, end)
getDateOrInterval: (field) ->
val = @get field
if val? and typeof val is 'object' then @getInterval field else @getDate field
getCode: (field) ->
val = @get field
if val? and typeof val is 'object' then new DT.Code(val.code, val.system, val.version)
class Patient
constructor: (json) ->
@identifier = json.identifier
@name = json.name
@gender = json.gender
@birthDate = if json.birthDate? then DT.DateTime.parse json.birthDate
@records = {}
<span class="branch-1 cbranch-no" title="branch not covered" > for r in json.records ? []</span>
@records[r.profile] ?= []
@records[r.profile].push new Record(r)
findRecords: (profile) ->
if profile is 'patient-qicore-qicore-patient' then [@] else @records[profile] ? []
FHIR.Patient::records = <span class="fstat-no" title="function not covered" >-></span>
<span class="cstat-no" title="statement not covered" > @_records = {}</span>
<span class="cstat-no" title="statement not covered" > for r in @json.records ? []</span>
@_records[r.profile] ?= []
<span class="cstat-no" title="statement not covered" > @_</span>records[r.profile].push new Record(r)
@_records
FHIR.Patient::findRecords = (profile) ->
if profile is 'patient-qicore-qicore-patient' then [@] else @_bundle?.findRecords(profile) ? <span class="branch-0 cbranch-no" title="branch not covered" >[]</span>
FHIR.Bundle::findRecords = (profile) ->
filtered = @entry().filter (e)->
<span class="branch-0 cbranch-no" title="branch not covered" > e.resource()?.meta()?.profile()?</span>.indexOf(profile) > -1
for e in filtered
r = e.resource()
r._bundle = this
r
FHIR.Bundle::findRecord = (profile) ->
@findRecords(profile)[0]
FHIR.Base::get = (field) ->
<span class="branch-0 cbranch-no" title="branch not covered" > @[field]?</span>.call(@)
FHIR.Base::getDate = (field) ->
val = @get field
if val instanceof DT.DateTime
val
else if typeof val is "string"
DT.DateTime.parse(val)
FHIR.Base::getInterval= <span class="fstat-no" title="function not covered" >(f</span>ield) ->
<span class="cstat-no" title="statement not covered" > val = @g</span>et field
if val instannceOf FHIR.Period
@periodToInterval val
FHIR.Base::getDateOrInterval = (field) ->
val = @get field
if val instanceof FHIR.Period
@periodToInterval(val)
else if typeof val is "string"
DT.DateTime.parse(val)
else if val instanceof DT.DateTime
val
FHIR.Base::getCode = (field) ->
val = @get field
@toCode(val)
FHIR.Base::toCode = (val) ->
if typeIsArray(val)
for c in val
@toCode(c)
else if val instanceof FHIR.CodeableConcept
@codableConceptToCodes val
else if val instanceof FHIR.Coding
@codingToCode val
FHIR.Base::codableConceptToCodes =(cc) ->
for c in cc.coding()
@codingToCode c
FHIR.Base::codingToCode = (coding) ->
new DT.Code(coding.code(), coding.system(), coding.version())
FHIR.Base::periodToInterval =(val) ->
if val instanceof FHIR.Period
start = val.getDate("start")
end = val.getDate("end")
new DT.Interval(start, end)
class PatientSource
constructor: (@patients) ->
@nextPatient()
currentPatient: ->
@current_patient
nextPatient: ->
@current = @patients.shift()
@current_bundle = if @current then new FHIR.Bundle(@current)
@current_patient = @current_bundle?.findRecord("patient-qicore-qicore-patient")
module.exports.Patient = Patient
module.exports.PatientSource = PatientSource
</pre></td></tr>
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