@jbrowse/plugin-linear-genome-view/esm/LinearGenomeView/types.d.ts

JBrowse 2 linear genome view

export interface BpOffset {
    refName?: string;
    index: number;
    offset: number;
    start?: number;
    end?: number;
    coord?: number;
    reversed?: boolean;
    assemblyName?: string;
    oob?: boolean;
}
export interface ExportSvgOptions {
    rasterizeLayers?: boolean;
    format?: 'svg' | 'png';
    filename?: string;
    Wrapper?: React.FC<{
        children: React.ReactNode;
    }>;
    fontSize?: number;
    rulerHeight?: number;
    textHeight?: number;
    paddingHeight?: number;
    headerHeight?: number;
    cytobandHeight?: number;
    trackLabels?: string;
    themeName?: string;
    showGridlines?: boolean;
}
export interface HighlightType {
    start: number;
    end: number;
    assemblyName?: string;
    refName: string;
    color?: string;
    label?: string;
}
export interface NavLocation {
    refName: string;
    start?: number;
    end?: number;
    assemblyName?: string;
}
export interface VolatileGuide {
    xPos: number;
}
export type TrackInit = string | {
    trackId: string;
    displaySnapshot?: Record<string, unknown>;
    trackSnapshot?: Record<string, unknown>;
};
export interface InitState {
    loc?: string;
    assembly: string;
    tracks?: TrackInit[];
    tracklist?: boolean;
    nav?: boolean;
    highlight?: string[];
}