@jbrowse/core/esm/data_adapters/BaseAdapter/BaseAdapter.js

JBrowse 2 core libraries used by plugins

import { getSnapshot, isStateTreeNode } from '@jbrowse/mobx-state-tree';
import { ConfigurationSchema, readConfObject, } from "../../configuration/index.js";
import idMaker from "../../util/idMaker.js";
const EmptyConfig = ConfigurationSchema('empty', {});
export class BaseAdapter {
    config;
    getSubAdapter;
    pluginManager;
    id;
    sequenceAdapterConfig;
    static capabilities = [];
    constructor(config = EmptyConfig.create(), getSubAdapter, pluginManager) {
        this.config = config;
        this.getSubAdapter = getSubAdapter;
        this.pluginManager = pluginManager;
        if (typeof jest === 'undefined') {
            const data = isStateTreeNode(config) ? getSnapshot(config) : config;
            this.id = `${idMaker(data)}`;
        }
        else {
            this.id = 'test';
        }
    }
    setSequenceAdapterConfig(config) {
        this.sequenceAdapterConfig = config;
    }
    getConf(arg) {
        return readConfObject(this.config, arg);
    }
    freeResources(_region) { }
}