@jbrowse/core/esm/TextSearch/TextSearchManager.d.ts

JBrowse 2 core libraries used by plugins

import QuickLRU from '../util/QuickLRU/index.ts';
import type BaseResult from './BaseResults.ts';
import type PluginManager from '../PluginManager.ts';
import type { AnyConfigurationModel } from '../configuration/index.ts';
import type { BaseTextSearchAdapter, BaseTextSearchArgs } from '../data_adapters/BaseAdapter/index.ts';
export interface SearchScope {
    includeAggregateIndexes: boolean;
    assemblyName: string;
    tracks?: string[];
}
export default class TextSearchManager {
    pluginManager: PluginManager;
    adapterCache: QuickLRU<string, BaseTextSearchAdapter>;
    constructor(pluginManager: PluginManager);
    clearCache(): void;
    loadTextSearchAdapters(searchScope: SearchScope): Promise<BaseTextSearchAdapter[]>;
    relevantAdapters(searchScope: SearchScope): ({
        [x: string]: any;
    } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
            [x: string]: any;
        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("../configuration/types.ts").AnyConfigurationSchemaType>);
    } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("../configuration/types.ts").AnyConfigurationSchemaType>)[];
    getAdaptersWithAssembly(assemblyName: string, confs: AnyConfigurationModel[]): ({
        [x: string]: any;
    } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
            [x: string]: any;
        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("../configuration/types.ts").AnyConfigurationSchemaType>);
    } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("../configuration/types.ts").AnyConfigurationSchemaType>)[];
    getTrackAdaptersWithAssembly(assemblyName: string, confs: AnyConfigurationModel[]): ({
        [x: string]: any;
    } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
            [x: string]: any;
        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("../configuration/types.ts").AnyConfigurationSchemaType>);
    } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("../configuration/types.ts").AnyConfigurationSchemaType>)[];
    search(args: BaseTextSearchArgs, searchScope: SearchScope, rankFn: (results: BaseResult[]) => BaseResult[]): Promise<BaseResult[]>;
    search2({ args, searchScope, rankFn, }: {
        args: BaseTextSearchArgs;
        searchScope: SearchScope;
        rankFn: (results: BaseResult[]) => BaseResult[];
    }): Promise<BaseResult[]>;
    sortResults2({ results, rankFn, args, }: {
        results: BaseResult[];
        args: BaseTextSearchArgs;
        rankFn: (results: BaseResult[]) => BaseResult[];
    }): BaseResult[];
}