@jbrowse/core/TextSearch/TextSearchManager.d.ts

JBrowse 2 core libraries used by plugins

import QuickLRU from '../util/QuickLRU';
import type BaseResult from './BaseResults';
import type PluginManager from '../PluginManager';
import type { AnyConfigurationModel } from '../configuration';
import type { BaseTextSearchAdapter, BaseTextSearchArgs } from '../data_adapters/BaseAdapter';
export interface SearchScope {
    includeAggregateIndexes: boolean;
    assemblyName: string;
    tracks?: string[];
}
export default class TextSearchManager {
    pluginManager: PluginManager;
    adapterCache: QuickLRU<string, BaseTextSearchAdapter>;
    constructor(pluginManager: PluginManager);
    loadTextSearchAdapters(searchScope: SearchScope): Promise<BaseTextSearchAdapter[]>;
    relevantAdapters(searchScope: SearchScope): ({
        [x: string]: any;
    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
            [x: string]: any;
        } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("../configuration").AnyConfigurationSchemaType>);
    } & import("mobx-state-tree").IStateTreeNode<import("../configuration").AnyConfigurationSchemaType>)[];
    getAdaptersWithAssembly(assemblyName: string, confs: AnyConfigurationModel[]): AnyConfigurationModel[];
    getTrackAdaptersWithAssembly(assemblyName: string, confs: AnyConfigurationModel[]): ({
        [x: string]: any;
    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
            [x: string]: any;
        } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("../configuration").AnyConfigurationSchemaType>);
    } & import("mobx-state-tree").IStateTreeNode<import("../configuration").AnyConfigurationSchemaType>)[];
    search(args: BaseTextSearchArgs, searchScope: SearchScope, rankFn: (results: BaseResult[]) => BaseResult[]): Promise<BaseResult[]>;
    sortResults(results: BaseResult[], rankFn: (results: BaseResult[]) => BaseResult[]): BaseResult[];
}