UNPKG

@gmod/jbrowse

Version:

JBrowse - client-side genome browser

jbrowse.org

GMOD/jbrowse

23 lines (17 loc) • 32.4 kB
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require(['JBrowse/Store/SeqFeature/GFF3/GFF3Parser'],function( GFF3Parser ) { describe("GFF3Parser (check correct parsing of deeper features)", function() { var gff3Parser; var gff3String9 = "##gff-version 3\nGroup1.33 AU9 gene 244554 245373 0.32 - . ID=au9.g901;Name=au9.g901\nGroup1.33 AU9 mRNA 244554 245373 0.32 - . ID=au9.g901.t1;Name=au9.g901.t1;Parent=au9.g901\nGroup1.33 AU9 three_prime_UTR 244554 244667 0.5 - . Parent=au9.g901.t1\nGroup1.33 AU9 stop_codon 244668 244670 . - 0 Parent=au9.g901.t1\nGroup1.33 AU9 CDS 244668 244772 1 - 0 Parent=au9.g901.t1\nGroup1.33 AU9 CDS 244859 245086 1 - 0 Parent=au9.g901.t1\nGroup1.33 AU9 start_codon 245084 245086 . - 0 Parent=au9.g901.t1\nGroup1.33 AU9 five_prime_UTR 245087 245114 1 - . Parent=au9.g901.t1\nGroup1.33 AU9 five_prime_UTR 245314 245373 0.67 - . Parent=au9.g901.t1\nGroup1.33 AU9 gene 233954 238223 0.02 - . ID=au9.g897;Name=au9.g897\nGroup1.33 AU9 mRNA 233954 238223 0.02 - . ID=au9.g897.t1;Name=au9.g897.t1;Parent=au9.g897\nGroup1.33 AU9 three_prime_UTR 233954 235037 0.1 - . Parent=au9.g897.t1\nGroup1.33 AU9 three_prime_UTR 235270 236372 0.45 - . Parent=au9.g897.t1\nGroup1.33 AU9 stop_codon 236373 236375 . - 0 Parent=au9.g897.t1\nGroup1.33 AU9 CDS 236373 236811 1 - 1 Parent=au9.g897.t1\nGroup1.33 AU9 CDS 236910 237019 1 - 0 Parent=au9.g897.t1\nGroup1.33 AU9 CDS 237537 237644 1 - 0 Parent=au9.g897.t1\nGroup1.33 AU9 start_codon 237642 237644 . - 0 Parent=au9.g897.t1\nGroup1.33 AU9 five_prime_UTR 237645 237815 0.94 - . Parent=au9.g897.t1\nGroup1.33 AU9 five_prime_UTR 238129 238223 0.52 - . Parent=au9.g897.t1\nGroup1.33 AU9 gene 245484 247260 0.18 + . ID=au9.g902;Name=au9.g902\nGroup1.33 AU9 mRNA 245484 247260 0.18 + . ID=au9.g902.t1;Name=au9.g902.t1;Parent=au9.g902\nGroup1.33 AU9 five_prime_UTR 245484 245533 0.82 + . Parent=au9.g902.t1\nGroup1.33 AU9 five_prime_UTR 245702 245759 1 + . Parent=au9.g902.t1\nGroup1.33 AU9 start_codon 245760 245762 . + 0 Parent=au9.g902.t1\nGroup1.33 AU9 CDS 245760 245879 1 + 0 Parent=au9.g902.t1\nGroup1.33 AU9 CDS 246046 246278 1 + 0 Parent=au9.g902.t1\nGroup1.33 AU9 CDS 246389 246815 1 + 1 Parent=au9.g902.t1\nGroup1.33 AU9 stop_codon 246813 246815 . + 0 Parent=au9.g902.t1\nGroup1.33 AU9 three_prime_UTR 246816 247260 0.21 + . Parent=au9.g902.t1\nGroup1.33 AU9 gene 386168 453663 0.36 - . ID=au9.g910;Name=au9.g910\nGroup1.33 AU9 mRNA 386168 453663 0.09 - . ID=au9.g910.t2;Name=au9.g910.t2;Parent=au9.g910\nGroup1.33 AU9 three_prime_UTR 386168 386401 0.44 - . Parent=au9.g910.t2\nGroup1.33 AU9 stop_codon 386402 386404 . - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 386402 386621 1 - 1 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 387039 387094 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 387680 387923 1 - 1 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 388064 388570 1 - 1 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 388899 389083 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 389205 391931 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 394197 394454 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 398253 398555 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 404427 405383 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 405468 405767 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 405916 406612 1 - 1 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 406687 412691 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 415225 415359 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 415702 416007 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 416124 416228 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 417582 427069 0.3 - 2 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 427372 431686 0.7 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 434779 434889 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 435399 435761 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 435857 436015 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 436318 437128 1 - 1 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 444425 444576 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 444759 445064 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 445204 445542 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 445841 446483 1 - 1 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 450135 450736 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 450839 451489 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 451706 452485 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 CDS 452589 453635 1 - 0 Parent=au9.g910.t2\nGroup1.33 AU9 start_codon 453633 453635 . - 0 Parent=au9.g910.t2\nGroup1.33 AU9 five_prime_UTR 453636 453663 0.87 - . Parent=au9.g910.t2\nGroup1.33 AU9 mRNA 386168 453663 0.17 - . ID=au9.g910.t3;Name=au9.g910.t3;Parent=au9.g910\nGroup1.33 AU9 three_prime_UTR 386168 386401 1.49 - . Parent=au9.g910.t3\nGroup1.33 AU9 stop_codon 386402 386404 . - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 386402 386621 2 - 1 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 387039 387094 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 387680 387923 2 - 1 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 388064 388570 2 - 1 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 388899 389083 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 389205 391931 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 394197 394454 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 398253 398555 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 404427 405383 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 405468 405767 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 405916 406612 2 - 1 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 406687 412691 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 415225 415359 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 415702 416007 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 416124 416228 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 417582 427069 1.45 - 2 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 427372 431683 1.79 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 434779 434889 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 435399 435761 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 435857 436015 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 436318 437128 2 - 1 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 444425 444576 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 444759 445064 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 445204 445542 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 445841 446483 2 - 1 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 450135 450736 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 450839 451489 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 451706 452485 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 CDS 452589 453635 2 - 0 Parent=au9.g910.t3\nGroup1.33 AU9 start_codon 453633 453635 . - 0 Parent=au9.g910.t3\nGroup1.33 AU9 five_prime_UTR 453636 453663 1.85 - . Parent=au9.g910.t3\nGroup1.33 AU9 mRNA 386168 453663 0.1 - . ID=au9.g910.t1;Name=au9.g910.t1;Parent=au9.g910\nGroup1.33 AU9 three_prime_UTR 386168 386401 0.46 - . Parent=au9.g910.t1\nGroup1.33 AU9 stop_codon 386402 386404 . - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 386402 386621 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 387039 387094 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 387680 387923 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 388064 388570 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 388754 388792 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 388899 389083 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 389205 391931 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 394197 394454 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 398253 398555 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 404427 405383 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 405468 405767 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 405916 406612 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 406687 412691 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 415225 415359 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 415702 416007 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 416124 416228 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 417582 427069 0.28 - 2 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 427372 431683 0.8 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 434779 434889 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 435399 435761 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 435857 436015 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 436318 437128 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 444425 444576 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 444759 445064 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 445204 445542 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 445841 446483 1 - 1 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 450135 450736 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 450839 451489 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 451706 452485 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 CDS 452589 453635 1 - 0 Parent=au9.g910.t1\nGroup1.33 AU9 start_codon 453633 453635 . - 0 Parent=au9.g910.t1\nGroup1.33 AU9 five_prime_UTR 453636 453663 0.87 - . Parent=au9.g910.t1\nGroup1.33 AU9 gene 238464 240438 0.32 + . ID=au9.g898;Name=au9.g898\nGroup1.33 AU9 mRNA 238464 240438 0.32 + . ID=au9.g898.t1;Name=au9.g898.t1;Parent=au9.g898\nGroup1.33 AU9 five_prime_UTR 238464 238636 0.93 + . Parent=au9.g898.t1\nGroup1.33 AU9 start_codon 238637 238639 . + 0 Parent=au9.g898.t1\nGroup1.33 AU9 CDS 238637 238814 1 + 0 Parent=au9.g898.t1\nGroup1.33 AU9 CDS 238986 239199 1 + 2 Parent=au9.g898.t1\nGroup1.33 AU9 CDS 239278 239576 1 + 1 Parent=au9.g898.t1\nGroup1.33 AU9 CDS 239642 240106 1 + 2 Parent=au9.g898.t1\nGroup1.33 AU9 CDS 240181 240332 1 + 2 Parent=au9.g898.t1\nGroup1.33 AU9 stop_codon 240330 240332 . + 0 Parent=au9.g898.t1\nGroup1.33 AU9 three_prime_UTR 240333 240438 0.35 + . Parent=au9.g898.t1\nGroup1.33 AU9 gene 357544 363884 0.07 + . ID=au9.g907;Name=au9.g907\nGroup1.33 AU9 mRNA 357544 363884 0.07 + . ID=au9.g907.t1;Name=au9.g907.t1;Parent=au9.g907\nGroup1.33 AU9 five_prime_UTR 357544 357631 0.14 + . Parent=au9.g907.t1\nGroup1.33 AU9 start_codon 357632 357634 . + 0 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 357632 357716 1 + 0 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 357783 357890 0.94 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 358098 358179 0.94 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 358278 358404 1 + 1 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 358580 358781 1 + 0 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 358923 359250 1 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 359554 359997 1 + 1 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 360059 360438 1 + 1 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 360531 360911 1 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 360988 361200 1 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 361268 361649 1 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 361710 361804 1 + 1 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 361874 362122 1 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 362210 362245 0.74 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 362376 362557 1 + 2 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 362656 362877 1 + 0 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 362955 363245 1 + 0 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 363341 363493 1 + 0 Parent=au9.g907.t1\nGroup1.33 AU9 CDS 363565 363717 1 + 0 Parent=au9.g907.t1\nGroup1.33 AU9 stop_codon 363715 363717 . + 0 Parent=au9.g907.t1\nGroup1.33 AU9 three_prime_UTR 363718 363884 0.63 + . Parent=au9.g907.t1\nGroup1.33 AU9 gene 240447 242823 0.08 - . ID=au9.g899;Name=au9.g899\nGroup1.33 AU9 mRNA 240447 242823 0.08 - . ID=au9.g899.t1;Name=au9.g899.t1;Parent=au9.g899\nGroup1.33 AU9 three_prime_UTR 240447 240500 0.34 - . Parent=au9.g899.t1\nGroup1.33 AU9 stop_codon 240501 240503 . - 0 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 240501 240748 1 - 2 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 240831 241047 1 - 0 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 241124 241215 1 - 2 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 241631 241748 1 - 0 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 241885 242054 0.99 - 2 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 242132 242188 1 - 2 Parent=au9.g899.t1\nGroup1.33 AU9 CDS 242743 242758 1 - 0 Parent=au9.g899.t1\nGroup1.33 AU9 start_codon 242756 242758 . - 0 Parent=au9.g899.t1\nGroup1.33 AU9 five_prime_UTR 242759 242823 0.23 - . Parent=au9.g899.t1\nGroup1.33 AU9 gene 340359 346793 0.07 - . ID=au9.g905;Name=au9.g905\nGroup1.33 AU9 mRNA 340359 346793 0.07 - . ID=au9.g905.t1;Name=au9.g905.t1;Parent=au9.g905\nGroup1.33 AU9 three_prime_UTR 340359 341403 0.11 - . Parent=au9.g905.t1\nGroup1.33 AU9 three_prime_UTR 341773 342589 0.53 - . Parent=au9.g905.t1\nGroup1.33 AU9 stop_codon 342590 342592 . - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 342590 342791 1 - 1 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 342853 343028 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 343104 343208 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 343277 343432 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 343506 343726 1 - 2 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 343817 343949 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 344042 344095 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 344199 344276 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 344390 344470 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 CDS 344611 344853 1 - 0 Parent=au9.g905.t1\nGroup1.33 AU9 start_codon 344851 344853 . - 0 Parent=au9.g905.t1\nGroup1.33 AU9 five_prime_UTR 344854 344898 1 - . Parent=au9.g905.t1\nGroup1.33 AU9 five_prime_UTR 346734 346793 0.77 - . Parent=au9.g905.t1\nGroup1.33 AU9 gene 248163 252883 0.21 - . ID=au9.g903;Name=au9.g903\nGroup1.33 AU9 mRNA 248163 252883 0.21 - . ID=au9.g903.t1;Name=au9.g903.t1;Parent=au9.g903\nGroup1.33 AU9 three_prime_UTR 248163 248582 0.34 - . Parent=au9.g903.t1\nGroup1.33 AU9 stop_codon 248583 248585 . - 0 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 248583 248772 1 - 1 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 248841 249131 1 - 1 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 249198 249405 1 - 2 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 249480 251110 1 - 1 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 251190 251458 1 - 0 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 251537 251916 1 - 2 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 251993 252198 1 - 1 Parent=au9.g903.t1\nGroup1.33 AU9 CDS 252537 252589 1 - 0 Parent=au9.g903.t1\nGroup1.33 AU9 start_codon 252587 252589 . - 0 Parent=au9.g903.t1\nGroup1.33 AU9 five_prime_UTR 252590 252612 1 - . Parent=au9.g903.t1\nGroup1.33 AU9 five_prime_UTR 252723 252883 0.64 - . Parent=au9.g903.t1\nGroup1.33 AU9 gene 243454 244465 0.3 + . ID=au9.g900;Name=au9.g900\nGroup1.33 AU9 mRNA 243454 244465 0.3 + . ID=au9.g900.t1;Name=au9.g900.t1;Parent=au9.g900\nGroup1.33 AU9 five_prime_UTR 243454 243508 0.6 + . Parent=au9.g900.t1\nGroup1.33 AU9 start_codon 243509 243511 . + 0 Parent=au9.g900.t1\nGroup1.33 AU9 CDS 243509 243584 1 + 0 Parent=au9.g900.t1\nGroup1.33 AU9 CDS 243741 243835 0.95 + 2 Parent=au9.g900.t1\nGroup1.33 AU9 CDS 243972 244058 0.86 + 0 Parent=au9.g900.t1\nGroup1.33 AU9 stop_codon 244056 244058 . + 0 Parent=au9.g900.t1\nGroup1.33 AU9 three_prime_UTR 244059 244264 0.86 + . Parent=au9.g900.t1\nGroup1.33 AU9 three_prime_UTR 244364 244465 0.45 + . Parent=au9.g900.t1\nGroup1.33 AU9 gene 526221 526797 0.08 - . ID=au9.g913;Name=au9.g913\nGroup1.33 AU9 mRNA 526221 526797 0.08 - . ID=au9.g913.t1;Name=au9.g913.t1;Parent=au9.g913\nGroup1.33 AU9 three_prime_UTR 526221 526433 0.17 - . Parent=au9.g913.t1\nGroup1.33 AU9 stop_codon 526434 526436 . - 0 Parent=au9.g913.t1\nGroup1.33 AU9 CDS 526434 526718 0.85 - 0 Parent=au9.g913.t1\nGroup1.33 AU9 start_codon 526716 526718 . - 0 Parent=au9.g913.t1\nGroup1.33 AU9 five_prime_UTR 526719 526797 0.37 - . Parent=au9.g913.t1\nGroup1.33 AU9 gene 453853 495027 0.42 - . ID=au9.g911;Name=au9.g911\nGroup1.33 AU9 mRNA 453853 495027 0.42 - . ID=au9.g911.t1;Name=au9.g911.t1;Parent=au9.g911\nGroup1.33 AU9 three_prime_UTR 453853 454028 0.95 - . Parent=au9.g911.t1\nGroup1.33 AU9 stop_codon 454029 454031 . - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 454029 454814 0.99 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 455459 455822 1 - 1 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 455910 457221 1 - 2 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 457299 457773 0.94 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 458511 460196 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 460473 460625 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 461754 461949 1 - 1 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 462024 462316 0.93 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 463970 464489 0.99 - 1 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 464586 464874 1 - 2 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 464952 470492 1 - 2 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 470568 471612 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 471899 472007 1 - 1 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 472086 473769 1 - 2 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 474002 474542 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 474849 474995 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 475080 475467 1 - 1 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 476044 476222 0.99 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 476945 477037 0.79 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 477269 477352 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 477439 477534 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 478184 478245 1 - 2 Parent=au9.g911.t1\nGroup1.33 AU9 CDS 494276 494948 1 - 0 Parent=au9.g911.t1\nGroup1.33 AU9 start_codon 494946 494948 . - 0 Parent=au9.g911.t1\nGroup1.33 AU9 five_prime_UTR 494949 495027 0.71 - . Parent=au9.g911.t1\nGroup1.33 AU9 gene 119144 202957 0.17 + . ID=au9.g892;Name=au9.g892\nGroup1.33 AU9 mRNA 199264 202957 0.08 + . ID=au9.g892.t1;Name=au9.g892.t1;Parent=au9.g892\nGroup1.33 AU9 five_prime_UTR 199264 199310 0.67 + . Parent=au9.g892.t1\nGroup1.33 AU9 start_codon 199311 199313 . + 0 Parent=au9.g892.t1\nGroup1.33 AU9 CDS 199311 199442 0.9 + 0 Parent=au9.g892.t1\nGroup1.33 AU9 CDS 199575 200607 0.95 + 0 Parent=au9.g892.t1\nGroup1.33 AU9 CDS 200685 200767 1 + 2 Parent=au9.g892.t1\nGroup1.33 AU9 CDS 200847 201233 1 + 0 Parent=au9.g892.t1\nGroup1.33 AU9 CDS 201342 201495 1 + 0 Parent=au9.g892.t1\nGroup1.33 AU9 CDS 201614 201714 1 + 2 Parent=au9.g892.t1\nGroup1.33 AU9 stop_codon 201712 201714 . + 0 Parent=au9.g892.t1\nGroup1.33 AU9 three_prime_UTR 201715 202382 0.68 + . Parent=au9.g892.t1\nGroup1.33 AU9 three_prime_UTR 202764 202957 0.14 + . Parent=au9.g892.t1\nGroup1.33 AU9 mRNA 119144 202957 0.04 + . ID=au9.g892.t2;Name=au9.g892.t2;Parent=au9.g892\nGroup1.33 AU9 five_prime_UTR 119144 119279 0.39 + . Parent=au9.g892.t2\nGroup1.33 AU9 start_codon 119280 119282 . + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 119280 119321 0.2 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 120833 120943 0.92 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 141014 141066 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 142655 142754 1 + 1 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 168704 169030 0.41 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 177758 177899 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 178757 178889 1 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 184630 184732 1 + 1 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 185774 185872 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 193044 193185 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 193372 193465 1 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 196135 196526 1 + 1 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 197229 197358 1 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 197607 197817 1 + 1 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 198047 198357 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 198423 198550 1 + 1 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 198623 198790 1 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 198893 198937 0.63 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 198985 199061 0.63 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 199575 200607 0.87 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 200685 200767 1 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 200847 201233 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 201342 201495 1 + 0 Parent=au9.g892.t2\nGroup1.33 AU9 CDS 201614 201714 1 + 2 Parent=au9.g892.t2\nGroup1.33 AU9 stop_codon 201712 201714 . + 0 Parent=au9.g892.t2\nGroup1.33 AU9 three_prime_UTR 201715 202382 0.59 + . Parent=au9.g892.t2\nGroup1.33 AU9 three_prime_UTR 202764 202957 0.18 + . Parent=au9.g892.t2\nGroup1.33 AU9 mRNA 119144 199148 0.05 + . ID=au9.g892.t3;Name=au9.g892.t3;Parent=au9.g892\nGroup1.33 AU9 five_prime_UTR 119144 119279 0.43 + . Parent=au9.g892.t3\nGroup1.33 AU9 start_codon 119280 119282 . + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 119280 119321 0.24 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 120833 120943 0.95 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 141014 141066 1 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 142655 142754 0.99 + 1 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 168704 169030 0.39 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 177758 177899 1 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 178757 178889 1 + 2 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 184630 184732 1 + 1 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 185774 185872 1 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 193044 193185 1 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 193372 193465 1 + 2 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 196135 196526 1 + 1 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 197229 197358 1 + 2 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 197607 197817 1 + 1 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 198047 198357 1 + 0 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 198423 198550 1 + 1 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 198623 198790 1 + 2 Parent=au9.g892.t3\nGroup1.33 AU9 CDS 198893 199026 0.95 + 2 Parent=au9.g892.t3\nGroup1.33 AU9 stop_codon 199024 199026 . + 0 Parent=au9.g892.t3\nGroup1.33 AU9 three_prime_UTR 199027 199148 0.22 + . Parent=au9.g892.t3\nGroup1.33 AU9 gene 500787 505437 0.45 - . ID=au9.g912;Name=au9.g912\nGroup1.33 AU9 mRNA 500787 505437 0.45 - . ID=au9.g912.t1;Name=au9.g912.t1;Parent=au9.g912\nGroup1.33 AU9 three_prime_UTR 500787 500896 0.66 - . Parent=au9.g912.t1\nGroup1.33 AU9 stop_codon 500897 500899 . - 0 Parent=au9.g912.t1\nGroup1.33 AU9 CDS 500897 501136 0.97 - 0 Parent=au9.g912.t1\nGroup1.33 AU9 CDS 502798 503133 1 - 0 Parent=au9.g912.t1\nGroup1.33 AU9 start_codon 503131 503133 . - 0 Parent=au9.g912.t1\nGroup1.33 AU9 five_prime_UTR 503134 503183 0.94 - . Parent=au9.g912.t1\nGroup1.33 AU9 five_prime_UTR 505402 505437 0.72 - . Parent=au9.g912.t1\nGroup1.33 AU9 gene 212694 217678 0.22 + . ID=au9.g895;Name=au9.g895\nGroup1.33 AU9 mRNA 212694 217678 0.22 + . ID=au9.g895.t1;Name=au9.g895.t1;Parent=au9.g895\nGroup1.33 AU9 five_prime_UTR 212694 212762 0.5 + . Parent=au9.g895.t1\nGroup1.33 AU9 five_prime_UTR 213620 213706 0.52 + . Parent=au9.g895.t1\nGroup1.33 AU9 start_codon 213707 213709 . + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 213707 213715 0.98 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 213802 213925 0.98 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 213995 214251 1 + 2 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 214334 214501 1 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 214606 214794 1 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 214881 215275 1 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 215343 215554 1 + 1 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 215673 215990 1 + 2 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 216073 216294 1 + 2 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 216355 216587 1 + 2 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 216658 216749 1 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 216817 217039 1 + 1 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 217109 217201 1 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 CDS 217289 217444 1 + 0 Parent=au9.g895.t1\nGroup1.33 AU9 stop_codon 217442 217444 . + 0 Parent=au9.g895.t1\nGroup1.33 AU9 three_prime_UTR 217445 217678 0.7 + . Parent=au9.g895.t1\nGroup1.33 AU9 gene 257918 340003 0.24 - . ID=au9.g904;Name=au9.g904\nGroup1.33 AU9 mRNA 257918 340003 0.08 - . ID=au9.g904.t2;Name=au9.g904.t2;Parent=au9.g904\nGroup1.33 AU9 three_prime_UTR 257918 257955 0.48 - . Parent=au9.g904.t2\nGroup1.33 AU9 stop_codon 257956 257958 . - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 257956 258045 0.96 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 258181 258362 1 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 258439 258643 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 258708 258995 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 259090 259181 0.71 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 259287 259581 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 259648 259821 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 259954 260159 1 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 260453 260690 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 261094 261168 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 261664 261713 1 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 262077 262199 1 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 272406 272570 1 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 274361 274577 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 274769 274903 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 300826 300914 1 - 2 Parent=au9.g904.t2\nGroup1.33 AU9 CDS 303400 303463 1 - 0 Parent=au9.g904.t2\nGroup1.33 AU9 start_codon 303461 303463 . - 0 Parent=au9.g904.t2\nGroup1.33 AU9 five_prime_UTR 303464 303528 1 - . Parent=au9.g904.t2\nGroup1.33 AU9 five_prime_UTR 339898 340003 0.14 - . Parent=au9.g904.t2\nGroup1.33 AU9 mRNA 257918 340003 0.03 - . ID=au9.g904.t1;Name=au9.g904.t1;Parent=au9.g904\nGroup1.33 AU9 three_prime_UTR 257918 257955 0.34 - . Parent=au9.g904.t1\nGroup1.33 AU9 stop_codon 257956 257958 . - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 257956 258045 0.99 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 258181 258362 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 258439 258643 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 258708 258995 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 259090 259214 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 259287 259578 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 259648 259821 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 259954 260159 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 260453 260690 0.98 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 261094 261168 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 261664 261713 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 262077 262199 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 272406 272570 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 274361 274577 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 274769 274903 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 300826 300914 1 - 2 Parent=au9.g904.t1\nGroup1.33 AU9 CDS 303400 303463 1 - 0 Parent=au9.g904.t1\nGroup1.33 AU9 start_codon 303461 303463 . - 0 Parent=au9.g904.t1\nGroup1.33 AU9 five_prime_UTR 303464 303528 1 - . Parent=au9.g904.t1\nGroup1.33 AU9 five_prime_UTR 339898 340003 0.12 - . Parent=au9.g904.t1\nGroup1.33 AU9 mRNA 257918 340003 0.13 - . ID=au9.g904.t3;Name=au9.g904.t3;Parent=au9.g904\nGroup1.33 AU9 three_prime_UTR 257918 257955 0.53 - . Parent=au9.g904.t3\nGroup1.33 AU9 stop_codon 257956 257958 . - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 257956 258045 0.95 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 258181 258362 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 258439 258643 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 258708 258995 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 259090 259214 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 259287 259581 0.99 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 259648 259821 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 259954 260159 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 260453 260690 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 261094 261168 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 261664 261713 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 262077 262199 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 272406 272570 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 274361 274577 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 274769 274903 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 300826 300914 1 - 2 Parent=au9.g904.t3\nGroup1.33 AU9 CDS 303400 303463 1 - 0 Parent=au9.g904.t3\nGroup1.33 AU9 start_codon 303461 303463 . - 0 Parent=au9.g904.t3\nGroup1.33 AU9 five_prime_UTR 303464 303528 1 - . Parent=au9.g904.t3\nGroup1.33 AU9 five_prime_UTR 339898 340003 0.2 - . Parent=au9.g904.t3\nGroup1.33 AU9 gene 206828 212063 0.1 - . ID=au9.g894;Name=au9.g894\nGroup1.33 AU9 mRNA 206828 212063 0.1 - . ID=au9.g894.t1;Name=au9.g894.t1;Parent=au9.g894\nGroup1.33 AU9 three_prime_UTR 206828 207277 0.39 - . Parent=au9.g894.t1\nGroup1.33 AU9 stop_codon 207278 207280 . - 0 Parent=au9.g894.t1\nGroup1.33 AU9 CDS 207278 210628 0.59 - 0 Parent=au9.g894.t1\nGroup1.33 AU9 CDS 210684 211802 0.38 - 0 Parent=au9.g894.t1\nGroup1.33 AU9 start_codon 211800 211802 . - 0 Parent=au9.g894.t1\nGroup1.33 AU9 five_prime_UTR 211803 211818 0.65 - . Parent=au9.g894.t1\nGroup1.33 AU9 five_prime_UTR 212003 212063 0.91 - . Parent=au9.g894.t1\nGroup1.33 AU9 gene 369441 386113 0.02 - . ID=au9.g909;Name=au9.g909\nGroup1.33 AU9 mRNA 369441 386113 0.02 - . ID=au9.g909.t1;Name=au9.g909.t1;Parent=au9.g909\nGroup1.33 AU9 three_prime_UTR 369441 370946 0.16 - . Parent=au9.g909.t1\nGroup1.33 AU9 stop_codon 370947 370949 . - 0 Parent=au9.g909.t1\nGroup1.33 AU9 CDS 370947 371111 1 - 0 Parent=au9.g909.t1\nGroup1.33 AU9 CDS 371310 371660 1 - 0 Parent=au9.g909.t1\nGroup1.33 AU9 CDS 374007 374159 1 - 0 Parent=au9.g909.t1\nGroup1.33 AU9 CDS 376716 377441 0.99 - 0 Parent=au9.g909.t1\nGroup1.33 AU9 CDS 382472 382777 0.7 - 0 Parent=au9.g909.t1\nGroup1.33 AU9 start_codon 382775 382777 . - 0 Parent=au9.g909.t1\nGroup1.33 AU9 five_prime_UTR 382778 382907 0.27 - . Parent=au9.g909.t1\nGroup1.33 AU9 five_prime_UTR 384257 384267 0.37 - . Parent=au9.g909.t1\nGroup1.33 AU9 five_prime_UTR 384326 386113 0.42 - . Parent=au9.g909.t1\nGroup1.33 AU9 gene 229464 233783 0.02 + . ID=au9.g896;Name=au9.g896\nGroup1.33 AU9 mRNA 229464 233783 0.02 + . ID=au9.g896.t1;Name=au9.g896.t1;Parent=au9.g896\nGroup1.33 AU9 five_prime_UTR 229464 229542 0.68 + . Parent=au9.g896.t1\nGroup1.33 AU9 start_codon 229543 229545 . + 0 Parent=au9.g896.t1\nGroup1.33 AU9 CDS 229543 229670 1 + 0 Parent=au9.g896.t1\nGroup1.33 AU9 CDS 229942 230760 1 + 1 Parent=au9.g896.t1\nGroup1.33 AU9 CDS 230825 231188 1 + 1 Parent=au9.g896.t1\nGroup1.33 AU9 CDS 231265 231558 0.99 + 0 Parent=au9.g896.t1\nGroup1.33 AU9 CDS 233405 233413 0.36 + 0 Parent=au9.g896.t1\nGroup1.33 AU9 stop_codon 233411 233413 . + 0 Parent=au9.g896.t1\nGroup1.33 AU9 three_prime_UTR 233414 233783 0.05 + . Parent=au9.g896.t1\nGroup1.33 AU9 gene 348311 357033 0.13 - . ID=au9.g906;Name=au9.g906\nGroup1.33 AU9 mRNA 348311 357033 0.13 - . ID=au9.g906.t1;Name=au9.g906.t1;Parent=au9.g906\nGroup1.33 AU9 three_prime_UTR 348311 349795 0.32 - . Parent=au9.g906.t1\nGroup1.33 AU9 three_prime_UTR 350731 351432 0.66 - . Parent=au9.g906.t1\nGroup1.33 AU9 stop_codon 351433 351435 . - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 351433 351579 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 351662 351912 1 - 2 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 351998 352250 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 352345 352593 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 352759 352905 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 353024 353167 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 353235 353369 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 353531 353694 1 - 2 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 353802 354036 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 354104 354823 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 354946 355296 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 355361 355555 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 CDS 355648 355845 1 - 0 Parent=au9.g906.t1\nGroup1.33 AU9 start_codon 355843 355845 . - 0 Parent=au9.g906.t1\nGroup1.33 AU9 five_prime_UTR 355846 355878 0.97 - . Parent=au9.g906.t1\nGroup1.33 AU9 five_prime_UTR 356840 357033 0.61 - . Parent=au9.g906.t1\nGroup1.33 AU9 gene 364069 367743 0.25 - . ID=au9.g908;Name=au9.g908\nGroup1.33 AU9 mRNA 364069 367743 0.25 - . ID=au9.g908.t1;Name=au9.g908.t1;Parent=au9.g908\nGroup1.33 AU9 three_prime_UTR 364069 364233 0.47 - . Parent=au9.g908.t1\nGroup1.33 AU9 stop_codon 364234 364236 . - 0 Parent=au9.g908.t1\nGroup1.33 AU9 CDS 364234 364348 1 - 1 Parent=au9.g908.t1\nGroup1.33 AU9 CDS 366816 366942 1 - 2 Parent=au9.g908.t1\nGroup1.33 AU9 CDS 367645 367717 1 - 0 Parent=au9.g908.t1\nGroup1.33 AU9 start_codon 367715 367717 . - 0 Parent=au9.g908.t1\nGroup1.33 AU9 five_prime_UTR 367718 367743 0.48 - . Parent=au9.g908.t1\nGroup1.33 AU9 gene 203791 206523 0.16 - . ID=au9.g893;Name=au9.g893\nGroup1.33 AU9 mRNA 203791 206523 0.16 - . ID=au9.g893.t1;Name=au9.g893.t1;Parent=au9.g893\nGroup1.33 AU9 three_prime_UTR 203791 203944 0.42 - . Parent=au9.g893.t1\nGroup1.33 AU9 stop_codon 203945 203947 . - 0 Parent=au9.g893.t1\nGroup1.33 AU9 CDS 203945 205030 0.99 - 0 Parent=au9.g893.t1\nGroup1.33 AU9 start_codon 205028 205030 . - 0 Parent=au9.g893.t1\nGroup1.33 AU9 five_prime_UTR 205031 205037 0.99 - . Parent=au9.g893.t1\nGroup1.33 AU9 five_prime_UTR 206343 206523 0.37 - . Parent=au9.g893.t1\n"; var jsonOutput9; beforeEach(function() { gff3Parser = new GFF3Parser(); jsonOutput9 = gff3Parser.parse( gff3String9 ); }); it("should put all three children with parent in example gene", function() { expect(jsonOutput9["parsedData"][3]["children"].length).toEqual(3); }); it("should put child 'au9.g910.t3' with Parent 'au9.g910'", function() { expect(jsonOutput9["parsedData"][3]["children"].length).toEqual(3); }); }); });