@gmod/jbrowse/src/JBrowse/Model/DataView.js

JBrowse - client-side genome browser

const jDataViewOld = cjsRequire('../../jdataview-1.1-patch.X')
const deprecate = cjsRequire('util-deprecate')

/**
 * Subclass of jDataView with a getUint64 method.
 */
define([

], function(

) {

var DataView = function() {
    jDataViewOld.apply( this, arguments );
}

// jDataView, in the version that JBrowse is using it, does not conform to the DataView API as
// it was eventually settled. We need to move away from using it.
DataView = deprecate(DataView,'JBrowse/Model/DataView is deprecated, please migrate to something else');

try {
    DataView.prototype = new jDataViewOld( new ArrayBuffer([1]), 0, 1 );
} catch(e) {
    console.error(e);
}

/**
 * Get a 53-bit integer from 64 bits and approximate the number if it overflows.
 */
DataView.prototype.getUint64Approx = function( byteOffset, littleEndian ) {
    var b = this._getBytes(8, byteOffset, littleEndian);
    var result = b[0] * Math.pow(2,56) + b[1]*Math.pow(2,48) + b[2]*Math.pow(2,40) + b[3]*Math.pow(2,32) +  b[4]*Math.pow(2, 24) + (b[5]<<16) + (b[6]<<8) + b[7];

    if( b[0] || b[1]&224 ) {
        result = Number(result);
        result.overflow = true;
    }

    return result;
};

/**
 * Get a 53-bit integer from 64 bits and throw if it overflows.
 */
DataView.prototype.getUint64 = function( byteOffset, littleEndian ) {
    var result = this.getUint64Approx( byteOffset, littleEndian );
    if( result.overflow )
        throw new Error('integer overflow');
    return result;
};


return DataView;

});