@gmod/cram
Version:
read CRAM files with pure Javascript
46 lines • 3.15 kB
JavaScript
;
/*
* Copyright (c) 2020 Genome Research Ltd.
* Author(s): James Bonfield
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
*
* 2. Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
*
* 3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
* Institute nor the names of its contributors may be used to endorse
* or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS
* IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
* TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
* PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH
* LTD OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
Object.defineProperty(exports, "__esModule", { value: true });
exports.bz2_uncompress = exports.tok3_uncompress = exports.fqzcomp_uncompress = exports.arith_uncompress = exports.r4x16_uncompress = exports.r4x8_uncompress = exports.rans_uncompress = void 0;
// This is an interface to the htscodecs library compiled to WASM.
// The WASM module is built from the official samtools/htscodecs C library.
var htscodecs_wasm_ts_1 = require("../htscodecs-wasm.js");
Object.defineProperty(exports, "rans_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.rans_uncompress; } });
Object.defineProperty(exports, "r4x8_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.rans_uncompress; } });
Object.defineProperty(exports, "r4x16_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.r4x16_uncompress; } });
Object.defineProperty(exports, "arith_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.arith_uncompress; } });
Object.defineProperty(exports, "fqzcomp_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.fqzcomp_uncompress; } });
Object.defineProperty(exports, "tok3_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.tok3_uncompress; } });
Object.defineProperty(exports, "bz2_uncompress", { enumerable: true, get: function () { return htscodecs_wasm_ts_1.bz2_uncompress; } });
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