@ebi-gene-expression-group/react-ebi-species/lib/mapping.js

React component based on the EBI species icons

"use strict";

Object.defineProperty(exports, "__esModule", {
  value: true
});
exports.lookUpIcon = exports.allSpecies = void 0;
function _toConsumableArray(r) { return _arrayWithoutHoles(r) || _iterableToArray(r) || _unsupportedIterableToArray(r) || _nonIterableSpread(); }
function _nonIterableSpread() { throw new TypeError("Invalid attempt to spread non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); }
function _unsupportedIterableToArray(r, a) { if (r) { if ("string" == typeof r) return _arrayLikeToArray(r, a); var t = {}.toString.call(r).slice(8, -1); return "Object" === t && r.constructor && (t = r.constructor.name), "Map" === t || "Set" === t ? Array.from(r) : "Arguments" === t || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(t) ? _arrayLikeToArray(r, a) : void 0; } }
function _iterableToArray(r) { if ("undefined" != typeof Symbol && null != r[Symbol.iterator] || null != r["@@iterator"]) return Array.from(r); }
function _arrayWithoutHoles(r) { if (Array.isArray(r)) return _arrayLikeToArray(r); }
function _arrayLikeToArray(r, a) { (null == a || a > r.length) && (a = r.length); for (var e = 0, n = Array(a); e < a; e++) n[e] = r[e]; return n; }
var mapping = {
  warmBlooded: {
    "a": ["alpaca", "vicugna pacos"],
    "l": ["armadillo"],
    "(": ["bat"],
    "A": ["cat", "felis catus"],
    "k": ["chicken", "gallus gallus"],
    "i": ["chimpanzee", "pan paniscus", "pan troglodytes"],
    "C": ["cow", "bos taurus"],
    "d": ["dog", "canis lupus", "canis lupus familiaris"],
    "D": ["dolphin"],
    "e": ["elephant", "loxodonta africana", "loxodonta cyclotis", "elephas maximus"],
    "!": ["ferret", "mustela putorius furo"],
    "n": ["finch", "pyrrhula pyrrhula"],
    "m": ["goat"],
    "G": ["gorilla", "gorilla gorilla"],
    "g": ["guinea pig", "cavia porcellus"],
    "o": ["hedgehog", "erinaceus europaeus"],
    "h": ["horse", "equus caballus"],
    "H": ["human", "homo sapiens"],
    "3": ["kangaroo rat"],
    "r": ["monkey", "macaca mulatta"],
    "9": ["monodelphis", "monodelphis domestica"],
    "q": ["marmoset", "callithrix jacchus"],
    "M": ["mouse", "mus musculus"],
    "N": ["mouse lemur"],
    "*": ["orangutan", "pongo abelii", "pongo pygmaeus"],
    "8": ["papio anubis"],
    "p": ["pig", "sus scrofa"],
    "U": ["platypus", "ornithorhynchus anatinus"],
    "t": ["rabbit", "oryctolagus cuniculus"],
    "R": ["rat", "rattus norvegicus"],
    "x": ["sheep", "ovis aries"],
    "Q": ["shrew"],
    "I": ["squirrel"],
    "w": ["wallaby"]
  },
  plants: {
    "5": ["barley", "hordeum vulgare", "hordeum vulgare subsp. vulgare"],
    "B": ["brassica", "brassica oleracea", "brassica rapa", "arabidopsis", "arabidopsis thaliana", "arabidopsis lyrata"],
    "%": ["brachypodium", "brachypodium distachyon"],
    "c": ["corn", "zea mays"],
    "^": ["glycinemax", "glycine max"],
    "O": ["grapes", "vitis vinifera"],
    "P": ["plant", "physcomitrella patens", "sorghum bicolor", "triticum aestivum"],
    "6": ["rice", "oryza sativa", "oryza sativa japonica group"],
    ")": ["tomatoes", "solanum lycopersicum", "solanum tuberosum"]
  },
  other: {
    "0": ["amoeba"],
    "7": ["anolis", "anolis carolinensis"],
    "£": ["aspergillus", "aspergillus fumigatus"],
    "$": ["bee"],
    "b": ["bug"],
    "W": ["c elegans", "caenorhabditis elegans", "schistosoma mansoni"],
    "2": ["diatom"],
    "L": ["ecoli", "escherichia coli"],
    "F": ["fly", "drosophila melanogaster"],
    "f": ["frog", "xenopus (silurana) tropicalis", "xenopus tropicalis"],
    "u": ["fungus"],
    "4": ["louse"],
    "1": ["mosquito", "anopheles gambiae"],
    "@": ["plasmodium", "plasmodium berghei", "plasmodium falciparum"],
    "E": ["pufferfish", "tetraodon nigroviridis"],
    "+": ["ray"],
    "s": ["scorpion"],
    "'": ["snail"],
    "S": ["spider"],
    "&": ["tick"],
    "v": ["virus"],
    "Y": ["yeast", "saccharomyces cerevisiae", "schizosaccharomyces pombe"],
    "Z": ["zebrafish", "danio rerio"]
  }
};
var lookUpInGroup = function lookUpInGroup(group, species) {
  return Object.keys(mapping[group]).find(function (iconChar) {
    return mapping[group][iconChar].includes(species.toLowerCase());
  });
};
var lookUpIcon = exports.lookUpIcon = function lookUpIcon(species) {
  for (var group in mapping) {
    var iconChar = lookUpInGroup(group, species);
    if (iconChar) {
      return [group, iconChar];
    }
  }
  return ["", ""];
};
var allSpecies = exports.allSpecies = [];
for (var group in mapping) {
  for (var iconChar in mapping[group]) {
    allSpecies.push.apply(allSpecies, _toConsumableArray(mapping[group][iconChar]));
  }
}