@cleerlycode/cornerstone-wado-image-loader
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Cornerstone ImageLoader for DICOM WADO-URI
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<title>Code coverage report for src/imageLoader/wadouri/metaData/getModalityLUTOutputPixelRepresentation.js</title>
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<a href="../../../../index.html">all files</a> / <a href="index.html">src/imageLoader/wadouri/metaData/</a> getModalityLUTOutputPixelRepresentation.js
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<span class="strong">15.79% </span>
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<span class="cline-any cline-neutral"> </span></td><td class="text"><pre class="prettyprint lang-js">/* eslint no-bitwise: 0 */
function getMinStoredPixelValue (dataSet) <span class="fstat-no" title="function not covered" >{</span>
const pixelRepresentation = <span class="cstat-no" title="statement not covered" >dataSet.uint16('x00280103');</span>
const bitsStored = <span class="cstat-no" title="statement not covered" >dataSet.uint16('x00280101');</span>
<span class="cstat-no" title="statement not covered" > if (pixelRepresentation === 0) {</span>
<span class="cstat-no" title="statement not covered" > return 0;</span>
}
<span class="cstat-no" title="statement not covered" > return -1 << (bitsStored - 1);</span>
}
// 0 = unsigned / US, 1 = signed / SS
function getModalityLUTOutputPixelRepresentation (dataSet) {
// CT SOP Classes are always signed
const sopClassUID = dataSet.string('x00080016');
<span class="missing-if-branch" title="else path not taken" >E</span>if (sopClassUID === '1.2.840.10008.5.1.4.1.1.2' ||
<span class="branch-1 cbranch-no" title="branch not covered" > sopClassUID === '1.2.840.10008.5.1.4.1.1.2.1')</span> {
return 1;
}
// if rescale intercept and rescale slope are present, pass the minimum stored
// pixel value through them to see if we get a signed output range
const rescaleIntercept = <span class="cstat-no" title="statement not covered" >dataSet.floatString('x00281052');</span>
const rescaleSlope = <span class="cstat-no" title="statement not covered" >dataSet.floatString('x00281053');</span>
<span class="cstat-no" title="statement not covered" > if (rescaleIntercept !== undefined && rescaleSlope !== undefined) {</span>
const minStoredPixelValue = <span class="cstat-no" title="statement not covered" >getMinStoredPixelValue(dataSet);</span> //
const minModalityLutValue = <span class="cstat-no" title="statement not covered" >minStoredPixelValue * rescaleSlope + rescaleIntercept;</span>
<span class="cstat-no" title="statement not covered" > if (minModalityLutValue < 0) {</span>
<span class="cstat-no" title="statement not covered" > return 1;</span>
}
<span class="cstat-no" title="statement not covered" > return 0;</span>
}
// Output of non linear modality lut is always unsigned
<span class="cstat-no" title="statement not covered" > if (dataSet.elements.x00283000 && dataSet.elements.x00283000.length > 0) {</span>
<span class="cstat-no" title="statement not covered" > return 0;</span>
}
// If no modality lut transform, output is same as pixel representation
<span class="cstat-no" title="statement not covered" > return dataSet.uint16('x00280103');</span>
}
export default getModalityLUTOutputPixelRepresentation;
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